RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 KIF3BO15066 747 aa39.88■■■■□ 3.97
U2AF1-201ENST00000291552 RNF17Q9BXT8 1623 aaKnown RBP39.83■■■■□ 3.97
U2AF1-201ENST00000291552 TSPY4P0CV99 314 aa39.83■■■■□ 3.97
U2AF1-201ENST00000291552 TSPY10P0CW01 314 aa39.83■■■■□ 3.97
U2AF1-201ENST00000291552 CROCC2H7BZ55 1655 aa39.8■■■■□ 3.96
U2AF1-201ENST00000291552 PZPP20742 1482 aa39.78■■■■□ 3.96
U2AF1-201ENST00000291552 EIF2AK4Q9P2K8 1649 aaKnown RBP39.76■■■■□ 3.96
U2AF1-201ENST00000291552 PTPN23Q9H3S7 1636 aa39.76■■■■□ 3.95
U2AF1-201ENST00000291552 PLA2R1Q13018 1463 aa39.75■■■■□ 3.95
U2AF1-201ENST00000291552 LTBP4Q8N2S1 1624 aa39.74■■■■□ 3.95
U2AF1-201ENST00000291552 DNMT1P26358 1616 aaKnown RBP39.73■■■■□ 3.95
U2AF1-201ENST00000291552 MROH1Q8NDA8 1641 aa39.73■■■■□ 3.95
U2AF1-201ENST00000291552 A2ML1A8K2U0 1454 aa39.73■■■■□ 3.95
U2AF1-201ENST00000291552 TCOF1Q13428 1488 aaKnown RBP39.72■■■■□ 3.95
U2AF1-201ENST00000291552 FBXO31Q5XUX0 539 aaPredicted RBP39.7■■■■□ 3.95
U2AF1-201ENST00000291552 NCKAP5LQ9HCH0 1330 aa39.69■■■■□ 3.94
U2AF1-201ENST00000291552 WASHC2CQ9Y4E1 1318 aa39.68■■■■□ 3.94
U2AF1-201ENST00000291552 ZC3H13Q5T200 1668 aaKnown RBP39.68■■■■□ 3.94
U2AF1-201ENST00000291552 TNRQ92752 1358 aa39.68■■■■□ 3.94
U2AF1-201ENST00000291552 ABCC3O15438 1527 aa39.67■■■■□ 3.94
U2AF1-201ENST00000291552 SHANK2Q9UPX8 1470 aa39.67■■■■□ 3.94
U2AF1-201ENST00000291552 ABCC5O15440 1437 aa39.65■■■■□ 3.94
U2AF1-201ENST00000291552 APLP2Q06481 763 aa39.65■■■■□ 3.94
U2AF1-201ENST00000291552 DUOX2Q9NRD8 1548 aa39.64■■■■□ 3.94
U2AF1-201ENST00000291552 FGD6Q6ZV73 1430 aa39.64■■■■□ 3.94
U2AF1-201ENST00000291552 CEP152O94986 1710 aa39.63■■■■□ 3.94
U2AF1-201ENST00000291552 POLR1AO95602 1720 aaPredicted RBP39.6■■■■□ 3.93
U2AF1-201ENST00000291552 DAPK1P53355 1430 aa39.57■■■■□ 3.93
U2AF1-201ENST00000291552 PKD2Q13563 968 aa39.56■■■■□ 3.92
U2AF1-201ENST00000291552 KIF15Q9NS87 1388 aa39.55■■■■□ 3.92
U2AF1-201ENST00000291552 NEURL4Q96JN8 1562 aa39.55■■■■□ 3.92
U2AF1-201ENST00000291552 SPATA31D1Q6ZQQ2 1576 aa39.53■■■■□ 3.92
U2AF1-201ENST00000291552 PRDM15P57071 1507 aaPredicted RBP39.51■■■■□ 3.92
U2AF1-201ENST00000291552 NLRP1Q9C000 1473 aa39.51■■■■□ 3.92
U2AF1-201ENST00000291552 CFAP65Q6ZU64 1925 aaKnown RBP39.5■■■■□ 3.91
U2AF1-201ENST00000291552 IQSEC2Q5JU85 1478 aa39.49■■■■□ 3.91
U2AF1-201ENST00000291552 ERBINQ96RT1 1412 aa39.48■■■■□ 3.91
U2AF1-201ENST00000291552 DEPDC5O75140 1603 aa39.48■■■■□ 3.91
U2AF1-201ENST00000291552 ZNF335Q9H4Z2 1342 aaPredicted RBP39.48■■■■□ 3.91
U2AF1-201ENST00000291552 ERVK-7P63135 1459 aa39.47■■■■□ 3.91
U2AF1-201ENST00000291552 UGGT1Q9NYU2 1555 aa39.45■■■■□ 3.91
U2AF1-201ENST00000291552 RRP7BPQ9NSQ0 103 aa39.43■■■■□ 3.9
U2AF1-201ENST00000291552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.4■■■■□ 3.91e-7■■■■■ 38.4
U2AF1-201ENST00000291552 CHIC2Q9UKJ5 165 aa39.33■■■■□ 3.89
U2AF1-201ENST00000291552 UBR1Q8IWV7 1749 aa39.33■■■■□ 3.89
U2AF1-201ENST00000291552 ANKRD30AQ9BXX3 1397 aa39.33■■■■□ 3.89
U2AF1-201ENST00000291552 ARHGAP31Q2M1Z3 1444 aa39.32■■■■□ 3.89
U2AF1-201ENST00000291552 ADGRL2O95490 1459 aa39.32■■■■□ 3.89
U2AF1-201ENST00000291552 VWDEQ8N2E2 1590 aa39.3■■■■□ 3.88
U2AF1-201ENST00000291552 THEMISQ8N1K5 641 aaPredicted RBP39.3■■■■□ 3.88
U2AF1-201ENST00000291552 MED14O60244 1454 aa39.29■■■■□ 3.88
U2AF1-201ENST00000291552 IQGAP1P46940 1657 aa39.26■■■■□ 3.88
U2AF1-201ENST00000291552 ANKLE2Q86XL3 938 aa39.25■■■■□ 3.87
U2AF1-201ENST00000291552 LMTK2Q8IWU2 1503 aa39.24■■■■□ 3.87
U2AF1-201ENST00000291552 NPHP4O75161 1426 aaPredicted RBP39.23■■■■□ 3.87
U2AF1-201ENST00000291552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.23■■■■□ 3.87
U2AF1-201ENST00000291552 FAM50AQ14320 339 aaKnown RBP39.2■■■■□ 3.87
U2AF1-201ENST00000291552 CPS1P31327 1500 aa39.17■■■■□ 3.86
U2AF1-201ENST00000291552 PIK3C2BO00750 1634 aa39.17■■■■□ 3.86
U2AF1-201ENST00000291552 KANK1Q14678 1352 aa39.17■■■■□ 3.86
U2AF1-201ENST00000291552 EFCAB6Q5THR3 1501 aa39.14■■■■□ 3.86
U2AF1-201ENST00000291552 STRCP1A6NGW2 1772 aa39.14■■■■□ 3.86
U2AF1-201ENST00000291552 ARHGAP23Q9P227 1491 aa39.12■■■■□ 3.85
U2AF1-201ENST00000291552 SLIT1O75093 1534 aa39.12■■■■□ 3.85
U2AF1-201ENST00000291552 SYNMO15061 1565 aa39.12■■■■□ 3.85
U2AF1-201ENST00000291552 ANKRD50Q9ULJ7 1429 aa39.08■■■■□ 3.85
U2AF1-201ENST00000291552 SCAF11Q99590 1463 aaKnown RBP39.07■■■■□ 3.85
U2AF1-201ENST00000291552 UBAP1LF5GYI3 381 aa39.07■■■■□ 3.85
U2AF1-201ENST00000291552 KDM5AP29375 1690 aaKnown RBP39.06■■■■□ 3.84
U2AF1-201ENST00000291552 NOS1P29475 1434 aa39.03■■■■□ 3.84
U2AF1-201ENST00000291552 UNC13BO14795 1591 aa39■■■■□ 3.83
U2AF1-201ENST00000291552 LTKP29376 864 aa38.99■■■■□ 3.83
U2AF1-201ENST00000291552 TET3O43151 1660 aa38.99■■■■□ 3.83
U2AF1-201ENST00000291552 ALKQ9UM73 1620 aa38.96■■■■□ 3.83
U2AF1-201ENST00000291552 GCC2Q8IWJ2 1684 aa38.95■■■■□ 3.83
U2AF1-201ENST00000291552 TMEM2Q9UHN6 1383 aa38.94■■■■□ 3.82
U2AF1-201ENST00000291552 IDI1Q13907 227 aa38.93■■■■□ 3.82
U2AF1-201ENST00000291552 ADGRB3O60242 1522 aa38.93■■■■□ 3.82
U2AF1-201ENST00000291552 ROCK1Q13464 1354 aa38.92■■■■□ 3.82
U2AF1-201ENST00000291552 RPRD2Q5VT52 1461 aaKnown RBP38.92■■■■□ 3.82
U2AF1-201ENST00000291552 LRRC7Q96NW7 1537 aa38.91■■■■□ 3.82
U2AF1-201ENST00000291552 TXNDC2Q86VQ3 553 aa38.91■■■■□ 3.82
U2AF1-201ENST00000291552 PPARGC1BQ86YN6 1023 aaKnown RBP38.9■■■■□ 3.82
U2AF1-201ENST00000291552 MYO5BQ9ULV0 1848 aa38.89■■■■□ 3.82
U2AF1-201ENST00000291552 DISP3Q9P2K9 1392 aa38.85■■■■□ 3.81
U2AF1-201ENST00000291552 XIRP1Q702N8 1843 aaKnown RBP38.84■■■■□ 3.81
U2AF1-201ENST00000291552 E9PCH4 1651 aa38.84■■■■□ 3.81
U2AF1-201ENST00000291552 IQGAP3Q86VI3 1631 aa38.84■■■■□ 3.81
U2AF1-201ENST00000291552 STAG3Q9UJ98 1225 aa38.82■■■■□ 3.8
U2AF1-201ENST00000291552 EID1Q9Y6B2 187 aa38.82■■■■□ 3.8
U2AF1-201ENST00000291552 TOM1O60784 492 aa38.79■■■■□ 3.8
U2AF1-201ENST00000291552 PIP4K2BP78356 416 aa38.78■■■■□ 3.8
U2AF1-201ENST00000291552 SLC52A1Q9NWF4 448 aa38.77■■■■□ 3.8
U2AF1-201ENST00000291552 TMEM131LA2VDJ0 1609 aa38.74■■■■□ 3.79
U2AF1-201ENST00000291552 SCAF1Q9H7N4 1312 aaKnown RBP38.74■■■■□ 3.79
U2AF1-201ENST00000291552 ITGAEP38570 1179 aa38.73■■■■□ 3.79
U2AF1-201ENST00000291552 HSPA1LP34931 641 aa38.7■■■■□ 3.79
U2AF1-201ENST00000291552 ZFYVE9O95405 1425 aa38.7■■■■□ 3.79
U2AF1-201ENST00000291552 ILDR2Q71H61 639 aa38.68■■■■□ 3.78
U2AF1-201ENST00000291552 RRBP1Q9P2E9 1410 aaKnown RBP38.65■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms