RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 KIF3BO15066 747 aa29.49■■■□□ 2.31
KHDC1-201ENST00000257765 ZNF335Q9H4Z2 1342 aaPredicted RBP29.48■■■□□ 2.31
KHDC1-201ENST00000257765 POLR1AO95602 1720 aaPredicted RBP29.47■■■□□ 2.31
KHDC1-201ENST00000257765 DISP3Q9P2K9 1392 aa29.46■■■□□ 2.31
KHDC1-201ENST00000257765 PZPP20742 1482 aa29.46■■■□□ 2.31
KHDC1-201ENST00000257765 VPS8Q8N3P4 1428 aa29.45■■■□□ 2.31
KHDC1-201ENST00000257765 LRRC9Q6ZRR7 1453 aa29.43■■■□□ 2.3
KHDC1-201ENST00000257765 TNRQ92752 1358 aa29.43■■■□□ 2.3
KHDC1-201ENST00000257765 SPATA31D1Q6ZQQ2 1576 aa29.43■■■□□ 2.3
KHDC1-201ENST00000257765 WASHC2CQ9Y4E1 1318 aa29.39■■■□□ 2.3
KHDC1-201ENST00000257765 MAST1Q9Y2H9 1570 aa29.39■■■□□ 2.29
KHDC1-201ENST00000257765 TSPY4P0CV99 314 aa29.38■■■□□ 2.29
KHDC1-201ENST00000257765 TSPY10P0CW01 314 aa29.38■■■□□ 2.29
KHDC1-201ENST00000257765 FBXO31Q5XUX0 539 aaPredicted RBP29.38■■■□□ 2.29
KHDC1-201ENST00000257765 NEURL4Q96JN8 1562 aa29.37■■■□□ 2.29
KHDC1-201ENST00000257765 RNF17Q9BXT8 1623 aaKnown RBP29.37■■■□□ 2.29
KHDC1-201ENST00000257765 ZC3H13Q5T200 1668 aaKnown RBP29.35■■■□□ 2.29
KHDC1-201ENST00000257765 MAP3K1Q13233 1512 aa29.34■■■□□ 2.29
KHDC1-201ENST00000257765 UBAP1LF5GYI3 381 aa29.33■■■□□ 2.29
KHDC1-201ENST00000257765 NLRP1Q9C000 1473 aa29.33■■■□□ 2.29
KHDC1-201ENST00000257765 EIF2AK4Q9P2K8 1649 aaKnown RBP29.33■■■□□ 2.29
KHDC1-201ENST00000257765 MIA2Q96PC5 1412 aa29.3■■■□□ 2.28
KHDC1-201ENST00000257765 UGGT1Q9NYU2 1555 aa29.3■■■□□ 2.28
KHDC1-201ENST00000257765 ILDR2Q71H61 639 aa29.29■■■□□ 2.28
KHDC1-201ENST00000257765 ABCC3O15438 1527 aa29.29■■■□□ 2.28
KHDC1-201ENST00000257765 LOC105371045A0A1W2PR82 267 aa29.28■■■□□ 2.28
KHDC1-201ENST00000257765 MYOM3Q5VTT5 1437 aa29.28■■■□□ 2.28
KHDC1-201ENST00000257765 CPS1P31327 1500 aa29.27■■■□□ 2.28
KHDC1-201ENST00000257765 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.26■■■□□ 2.27
KHDC1-201ENST00000257765 DEPDC5O75140 1603 aa29.25■■■□□ 2.27
KHDC1-201ENST00000257765 MROH1Q8NDA8 1641 aa29.24■■■□□ 2.27
KHDC1-201ENST00000257765 KANK4Q5T7N3 995 aaPredicted RBP29.24■■■□□ 2.27
KHDC1-201ENST00000257765 CEP152O94986 1710 aa29.23■■■□□ 2.27
KHDC1-201ENST00000257765 ANKLE2Q86XL3 938 aa29.23■■■□□ 2.27
KHDC1-201ENST00000257765 THEMISQ8N1K5 641 aaPredicted RBP29.23■■■□□ 2.27
KHDC1-201ENST00000257765 SHANK2Q9UPX8 1470 aa29.23■■■□□ 2.27
KHDC1-201ENST00000257765 MED14O60244 1454 aa29.2■■■□□ 2.26
KHDC1-201ENST00000257765 VWDEQ8N2E2 1590 aa29.2■■■□□ 2.26
KHDC1-201ENST00000257765 DUOX2Q9NRD8 1548 aa29.2■■■□□ 2.26
KHDC1-201ENST00000257765 CROCC2H7BZ55 1655 aa29.19■■■□□ 2.26
KHDC1-201ENST00000257765 IQGAP1P46940 1657 aa29.19■■■□□ 2.26
KHDC1-201ENST00000257765 ERVK-7P63135 1459 aa29.19■■■□□ 2.26
KHDC1-201ENST00000257765 NPHP4O75161 1426 aaPredicted RBP29.19■■■□□ 2.26
KHDC1-201ENST00000257765 SOCS7O14512 581 aa29.16■■■□□ 2.26
KHDC1-201ENST00000257765 CFAP65Q6ZU64 1925 aaKnown RBP29.15■■■□□ 2.26
KHDC1-201ENST00000257765 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
KHDC1-201ENST00000257765 PRDM15P57071 1507 aaPredicted RBP29.12■■■□□ 2.25
KHDC1-201ENST00000257765 UBR1Q8IWV7 1749 aa29.11■■■□□ 2.25
KHDC1-201ENST00000257765 SCAF1Q9H7N4 1312 aaKnown RBP29.1■■■□□ 2.25
KHDC1-201ENST00000257765 TOM1O60784 492 aa29.09■■■□□ 2.25
KHDC1-201ENST00000257765 KIF15Q9NS87 1388 aa29.09■■■□□ 2.25
KHDC1-201ENST00000257765 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
KHDC1-201ENST00000257765 ABCC5O15440 1437 aa29.06■■■□□ 2.24
KHDC1-201ENST00000257765 PIP4K2BP78356 416 aa29.06■■■□□ 2.24
KHDC1-201ENST00000257765 STRCP1A6NGW2 1772 aa29.06■■■□□ 2.24
KHDC1-201ENST00000257765 SYNMO15061 1565 aa29.05■■■□□ 2.24
KHDC1-201ENST00000257765 ARHGAP31Q2M1Z3 1444 aa29.03■■■□□ 2.24
KHDC1-201ENST00000257765 APLP2Q06481 763 aa29.03■■■□□ 2.24
KHDC1-201ENST00000257765 DAPK1P53355 1430 aa29.03■■■□□ 2.24
KHDC1-201ENST00000257765 HSPA1LP34931 641 aa29.01■■■□□ 2.23
KHDC1-201ENST00000257765 ALKQ9UM73 1620 aa29.01■■■□□ 2.23
KHDC1-201ENST00000257765 SCAF11Q99590 1463 aaKnown RBP29■■■□□ 2.23
KHDC1-201ENST00000257765 RRP7BPQ9NSQ0 103 aa28.99■■■□□ 2.23
KHDC1-201ENST00000257765 FGD6Q6ZV73 1430 aa28.99■■■□□ 2.23
KHDC1-201ENST00000257765 MED1Q15648 1581 aaPredicted RBP28.98■■■□□ 2.23
KHDC1-201ENST00000257765 SLIT1O75093 1534 aa28.98■■■□□ 2.23
KHDC1-201ENST00000257765 ARHGAP23Q9P227 1491 aa28.97■■■□□ 2.23
KHDC1-201ENST00000257765 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
KHDC1-201ENST00000257765 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
KHDC1-201ENST00000257765 KANK1Q14678 1352 aa28.94■■■□□ 2.22
KHDC1-201ENST00000257765 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.93■■■□□ 2.22
KHDC1-201ENST00000257765 ANKRD30AQ9BXX3 1397 aa28.9■■■□□ 2.22
KHDC1-201ENST00000257765 LMTK2Q8IWU2 1503 aa28.9■■■□□ 2.22
KHDC1-201ENST00000257765 KDM5AP29375 1690 aaKnown RBP28.9■■■□□ 2.22
KHDC1-201ENST00000257765 LTKP29376 864 aa28.88■■■□□ 2.21
KHDC1-201ENST00000257765 TXNDC2Q86VQ3 553 aa28.88■■■□□ 2.21
KHDC1-201ENST00000257765 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
KHDC1-201ENST00000257765 EID1Q9Y6B2 187 aa28.85■■■□□ 2.21
KHDC1-201ENST00000257765 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
KHDC1-201ENST00000257765 XIRP1Q702N8 1843 aaKnown RBP28.84■■■□□ 2.21
KHDC1-201ENST00000257765 TMEM2Q9UHN6 1383 aa28.84■■■□□ 2.21
KHDC1-201ENST00000257765 STAG3Q9UJ98 1225 aa28.82■■■□□ 2.2
KHDC1-201ENST00000257765 ADGRL2O95490 1459 aa28.82■■■□□ 2.2
KHDC1-201ENST00000257765 ADGRB3O60242 1522 aa28.77■■■□□ 2.2
KHDC1-201ENST00000257765 NOS1P29475 1434 aa28.77■■■□□ 2.2
KHDC1-201ENST00000257765 IDI1Q13907 227 aa28.75■■■□□ 2.19
KHDC1-201ENST00000257765 SENP3Q9H4L4 574 aaPredicted RBP28.74■■■□□ 2.19
KHDC1-201ENST00000257765 PHF23Q9BUL5 403 aaPredicted RBP28.72■■■□□ 2.19
KHDC1-201ENST00000257765 TET3O43151 1660 aa28.7■■■□□ 2.19
KHDC1-201ENST00000257765 FAM50AQ14320 339 aaKnown RBP28.7■■■□□ 2.18
KHDC1-201ENST00000257765 RPRD2Q5VT52 1461 aaKnown RBP28.7■■■□□ 2.18
KHDC1-201ENST00000257765 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
KHDC1-201ENST00000257765 SLC52A1Q9NWF4 448 aa28.66■■■□□ 2.18
KHDC1-201ENST00000257765 MYO5BQ9ULV0 1848 aa28.66■■■□□ 2.18
KHDC1-201ENST00000257765 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
KHDC1-201ENST00000257765 NWD1Q149M9 1564 aa28.65■■■□□ 2.18
KHDC1-201ENST00000257765 TMEM94Q12767 1356 aa28.64■■■□□ 2.18
KHDC1-201ENST00000257765 KCNA6P17658 529 aa28.64■■■□□ 2.18
KHDC1-201ENST00000257765 SLC26A8Q96RN1 970 aa28.63■■■□□ 2.17
KHDC1-201ENST00000257765 UNC13BO14795 1591 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms