RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CCDC144AA2RUR9 1427 aa30.28■■■□□ 2.44
RNF39-201ENST00000244360 TSHZ2Q9NRE2 1034 aa30.28■■■□□ 2.44
RNF39-201ENST00000244360 ATP10AO60312 1499 aa30.26■■■□□ 2.43
RNF39-201ENST00000244360 FKBP8Q14318 412 aa30.26■■■□□ 2.43
RNF39-201ENST00000244360 TRAPPC8Q9Y2L5 1435 aa30.26■■■□□ 2.43
RNF39-201ENST00000244360 WDR7Q9Y4E6 1490 aa30.24■■■□□ 2.43
RNF39-201ENST00000244360 DHX29Q7Z478 1369 aaKnown RBP30.22■■■□□ 2.43
RNF39-201ENST00000244360 RTEL1-TNFRSF6BF6WH68 1400 aa30.22■■■□□ 2.43
RNF39-201ENST00000244360 DCAF11Q8TEB1 546 aa30.21■■■□□ 2.43
RNF39-201ENST00000244360 CARD11Q9BXL7 1154 aa30.21■■■□□ 2.43
RNF39-201ENST00000244360 PRAG1Q86YV5 1406 aa30.2■■■□□ 2.43
RNF39-201ENST00000244360 TRPM1Q7Z4N2 1603 aa30.19■■■□□ 2.42
RNF39-201ENST00000244360 ZFYVE16Q7Z3T8 1539 aa30.18■■■□□ 2.42
RNF39-201ENST00000244360 CCDC184Q52MB2 194 aa30.18■■■□□ 2.42
RNF39-201ENST00000244360 ROCK2O75116 1388 aaKnown RBP30.18■■■□□ 2.42
RNF39-201ENST00000244360 HNRNPUQ00839 825 aaKnown RBP eCLIP30.18■■■□□ 2.42
RNF39-201ENST00000244360 ABCA9Q8IUA7 1624 aa30.17■■■□□ 2.42
RNF39-201ENST00000244360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.16■■■□□ 2.42
RNF39-201ENST00000244360 KDM2AQ9Y2K7 1162 aa30.16■■■□□ 2.42
RNF39-201ENST00000244360 A2MP01023 1474 aa30.16■■■□□ 2.42
RNF39-201ENST00000244360 GPRASP1Q5JY77 1395 aa30.12■■■□□ 2.41
RNF39-201ENST00000244360 LAMC1P11047 1609 aa30.11■■■□□ 2.41
RNF39-201ENST00000244360 SPAG9O60271 1321 aaKnown RBP30.11■■■□□ 2.41
RNF39-201ENST00000244360 MRS2Q9HD23 443 aa30.1■■■□□ 2.41
RNF39-201ENST00000244360 BCANQ96GW7 911 aa30.1■■■□□ 2.41
RNF39-201ENST00000244360 INO80Q9ULG1 1556 aaPredicted RBP30.08■■■□□ 2.41
RNF39-201ENST00000244360 DEPDC5O75140 1603 aa30.08■■■□□ 2.41
RNF39-201ENST00000244360 FANCAO15360 1455 aa30.08■■■□□ 2.41
RNF39-201ENST00000244360 ST20-MTHFSA0A0A6YYL1 179 aa30.07■■■□□ 2.4
RNF39-201ENST00000244360 EIF2AK4Q9P2K8 1649 aaKnown RBP30.06■■■□□ 2.4
RNF39-201ENST00000244360 AFAP1Q8N556 730 aa30.03■■■□□ 2.4
RNF39-201ENST00000244360 E9PCH4 1651 aa30.03■■■□□ 2.4
RNF39-201ENST00000244360 ATP7AQ04656 1500 aa30.03■■■□□ 2.4
RNF39-201ENST00000244360 PRDM15P57071 1507 aaPredicted RBP30.02■■■□□ 2.4
RNF39-201ENST00000244360 ASXL2Q76L83 1435 aa30.01■■■□□ 2.39
RNF39-201ENST00000244360 RGL3Q3MIN7 710 aa30■■■□□ 2.39
RNF39-201ENST00000244360 TRPM2O94759 1503 aa29.99■■■□□ 2.39
RNF39-201ENST00000244360 POLR3GLQ9BT43 218 aa29.98■■■□□ 2.39
RNF39-201ENST00000244360 VWDEQ8N2E2 1590 aa29.98■■■□□ 2.39
RNF39-201ENST00000244360 FAM9BQ8IZU0 186 aa29.97■■■□□ 2.39
RNF39-201ENST00000244360 ZBED9Q6R2W3 1325 aa29.97■■■□□ 2.39
RNF39-201ENST00000244360 ADGRL1O94910 1474 aa29.97■■■□□ 2.39
RNF39-201ENST00000244360 PTPRTO14522 1441 aa29.96■■■□□ 2.39
RNF39-201ENST00000244360 TET3O43151 1660 aa29.95■■■□□ 2.39
RNF39-201ENST00000244360 RNF17Q9BXT8 1623 aaKnown RBP29.95■■■□□ 2.38
RNF39-201ENST00000244360 NBPF1Q3BBV0 1214 aa29.94■■■□□ 2.38
RNF39-201ENST00000244360 SCAPERQ9BY12 1400 aa29.93■■■□□ 2.38
RNF39-201ENST00000244360 KTN1Q86UP2 1357 aaKnown RBP29.93■■■□□ 2.38
RNF39-201ENST00000244360 SPHKAPQ2M3C7 1700 aa29.92■■■□□ 2.38
RNF39-201ENST00000244360 COL17A1Q9UMD9 1497 aaPredicted RBP29.9■■■□□ 2.38
RNF39-201ENST00000244360 CEP152O94986 1710 aa29.89■■■□□ 2.38
RNF39-201ENST00000244360 MROH1Q8NDA8 1641 aa29.87■■■□□ 2.37
RNF39-201ENST00000244360 MADDQ8WXG6 1647 aa29.87■■■□□ 2.37
RNF39-201ENST00000244360 CLTCL1P53675 1640 aa29.86■■■□□ 2.37
RNF39-201ENST00000244360 KANK1Q14678 1352 aa29.86■■■□□ 2.37
RNF39-201ENST00000244360 ERICH6BQ5W0A0 696 aa29.85■■■□□ 2.37
RNF39-201ENST00000244360 OSCARQ8IYS5 282 aa29.85■■■□□ 2.37
RNF39-201ENST00000244360 TESK2Q96S53 571 aa29.84■■■□□ 2.37
RNF39-201ENST00000244360 NEURL4Q96JN8 1562 aa29.84■■■□□ 2.37
RNF39-201ENST00000244360 STAC3Q96MF2 364 aa29.82■■■□□ 2.36
RNF39-201ENST00000244360 KIDINS220Q9ULH0 1771 aa29.81■■■□□ 2.36
RNF39-201ENST00000244360 RALBP1Q15311 655 aa29.81■■■□□ 2.36
RNF39-201ENST00000244360 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
RNF39-201ENST00000244360 BRD4O60885 1362 aaPredicted RBP29.79■■■□□ 2.36
RNF39-201ENST00000244360 CFAP74Q9C0B2 1584 aa29.78■■■□□ 2.36
RNF39-201ENST00000244360 MYBBP1AQ9BQG0 1328 aaKnown RBP29.78■■■□□ 2.36
RNF39-201ENST00000244360 PNISRQ8TF01 805 aaKnown RBP29.77■■■□□ 2.36
RNF39-201ENST00000244360 DISP3Q9P2K9 1392 aa29.77■■■□□ 2.36
RNF39-201ENST00000244360 ANP32EQ9BTT0 268 aa29.77■■■□□ 2.36
RNF39-201ENST00000244360 IQGAP1P46940 1657 aa29.77■■■□□ 2.36
RNF39-201ENST00000244360 KIF3BO15066 747 aa29.76■■■□□ 2.35
RNF39-201ENST00000244360 NPM1P06748 294 aaKnown RBP eCLIP29.74■■■□□ 2.35
RNF39-201ENST00000244360 PARD3Q8TEW0 1356 aa29.74■■■□□ 2.35
RNF39-201ENST00000244360 LRPPRCP42704 1394 aaKnown RBP29.73■■■□□ 2.35
RNF39-201ENST00000244360 EFCAB6Q5THR3 1501 aa29.73■■■□□ 2.35
RNF39-201ENST00000244360 LMTK2Q8IWU2 1503 aa29.73■■■□□ 2.35
RNF39-201ENST00000244360 RBM19Q9Y4C8 960 aaKnown RBP29.72■■■□□ 2.35
RNF39-201ENST00000244360 PER1O15534 1290 aaPredicted RBP29.72■■■□□ 2.35
RNF39-201ENST00000244360 CNGB1Q14028 1251 aaPredicted RBP29.72■■■□□ 2.35
RNF39-201ENST00000244360 TMC1Q8TDI8 760 aa29.71■■■□□ 2.35
RNF39-201ENST00000244360 WASHC2CQ9Y4E1 1318 aa29.7■■■□□ 2.35
RNF39-201ENST00000244360 POGZQ7Z3K3 1410 aa29.7■■■□□ 2.35
RNF39-201ENST00000244360 SMG6Q86US8 1419 aaKnown RBP29.7■■■□□ 2.35
RNF39-201ENST00000244360 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
RNF39-201ENST00000244360 TMF1P82094 1093 aa29.69■■■□□ 2.34
RNF39-201ENST00000244360 KIAA1210Q9ULL0 1709 aa29.69■■■□□ 2.34
RNF39-201ENST00000244360 MYT1LQ9UL68 1186 aa29.67■■■□□ 2.34
RNF39-201ENST00000244360 MLH3Q9UHC1 1453 aa29.67■■■□□ 2.34
RNF39-201ENST00000244360 PPRC1Q5VV67 1664 aaKnown RBP29.66■■■□□ 2.34
RNF39-201ENST00000244360 SCAF11Q99590 1463 aaKnown RBP29.66■■■□□ 2.34
RNF39-201ENST00000244360 MYOM2P54296 1465 aa29.64■■■□□ 2.34
RNF39-201ENST00000244360 NLRP13Q86W25 1043 aa29.63■■■□□ 2.33
RNF39-201ENST00000244360 FRMPD1Q5SYB0 1578 aa29.62■■■□□ 2.33
RNF39-201ENST00000244360 HECW2Q9P2P5 1572 aa29.61■■■□□ 2.33
RNF39-201ENST00000244360 UGGT1Q9NYU2 1555 aa29.6■■■□□ 2.33
RNF39-201ENST00000244360 PPP4R2Q9NY27 417 aa29.59■■■□□ 2.33
RNF39-201ENST00000244360 MAP3K4Q9Y6R4 1608 aa29.59■■■□□ 2.33
RNF39-201ENST00000244360 IRX6P78412 446 aaPredicted RBP29.59■■■□□ 2.33
RNF39-201ENST00000244360 KIF1BO60333 1816 aa29.58■■■□□ 2.33
RNF39-201ENST00000244360 IFT172Q9UG01 1749 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms