RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 PKD2Q13563 968 aa31.25■■■□□ 2.59
PTBP3-201ENST00000210227 ZNF335Q9H4Z2 1342 aaPredicted RBP31.24■■■□□ 2.59
PTBP3-201ENST00000210227 ARHGEF5Q12774 1597 aa31.23■■■□□ 2.59
PTBP3-201ENST00000210227 PZPP20742 1482 aa31.2■■■□□ 2.58
PTBP3-201ENST00000210227 KIF3BO15066 747 aa31.17■■■□□ 2.58
PTBP3-201ENST00000210227 NEURL4Q96JN8 1562 aa31.15■■■□□ 2.58
PTBP3-201ENST00000210227 TNRQ92752 1358 aa31.15■■■□□ 2.58
PTBP3-201ENST00000210227 RSPH4AQ5TD94 716 aa31.12■■■□□ 2.57
PTBP3-201ENST00000210227 ILDR2Q71H61 639 aa31.12■■■□□ 2.57
PTBP3-201ENST00000210227 RNF17Q9BXT8 1623 aaKnown RBP31.11■■■□□ 2.57
PTBP3-201ENST00000210227 LRRC9Q6ZRR7 1453 aa31.1■■■□□ 2.57
PTBP3-201ENST00000210227 FBXO31Q5XUX0 539 aaPredicted RBP31.1■■■□□ 2.57
PTBP3-201ENST00000210227 VPS8Q8N3P4 1428 aa31.09■■■□□ 2.57
PTBP3-201ENST00000210227 MAST1Q9Y2H9 1570 aa31.09■■■□□ 2.57
PTBP3-201ENST00000210227 ZC3H13Q5T200 1668 aaKnown RBP31.08■■■□□ 2.57
PTBP3-201ENST00000210227 WASHC2CQ9Y4E1 1318 aa31.07■■■□□ 2.56
PTBP3-201ENST00000210227 UBAP1LF5GYI3 381 aa31.07■■■□□ 2.56
PTBP3-201ENST00000210227 EIF2AK4Q9P2K8 1649 aaKnown RBP31.05■■■□□ 2.56
PTBP3-201ENST00000210227 NLRP1Q9C000 1473 aa31.04■■■□□ 2.56
PTBP3-201ENST00000210227 UGGT1Q9NYU2 1555 aa31.01■■■□□ 2.56
PTBP3-201ENST00000210227 MIA2Q96PC5 1412 aa31.01■■■□□ 2.55
PTBP3-201ENST00000210227 TSPY4P0CV99 314 aa31.01■■■□□ 2.55
PTBP3-201ENST00000210227 TSPY10P0CW01 314 aa31.01■■■□□ 2.55
PTBP3-201ENST00000210227 ABCC3O15438 1527 aa31.01■■■□□ 2.55
PTBP3-201ENST00000210227 CPS1P31327 1500 aa31.01■■■□□ 2.55
PTBP3-201ENST00000210227 DEPDC5O75140 1603 aa31■■■□□ 2.55
PTBP3-201ENST00000210227 MROH1Q8NDA8 1641 aa30.98■■■□□ 2.55
PTBP3-201ENST00000210227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.98■■■□□ 2.55
PTBP3-201ENST00000210227 MAP3K1Q13233 1512 aa30.98■■■□□ 2.55
PTBP3-201ENST00000210227 SHANK2Q9UPX8 1470 aa30.97■■■□□ 2.55
PTBP3-201ENST00000210227 SOCS7O14512 581 aa30.97■■■□□ 2.55
PTBP3-201ENST00000210227 CEP152O94986 1710 aa30.97■■■□□ 2.55
PTBP3-201ENST00000210227 VWDEQ8N2E2 1590 aa30.96■■■□□ 2.55
PTBP3-201ENST00000210227 IQGAP1P46940 1657 aa30.94■■■□□ 2.54
PTBP3-201ENST00000210227 MYOM3Q5VTT5 1437 aa30.93■■■□□ 2.54
PTBP3-201ENST00000210227 MED14O60244 1454 aa30.93■■■□□ 2.54
PTBP3-201ENST00000210227 CROCC2H7BZ55 1655 aa30.91■■■□□ 2.54
PTBP3-201ENST00000210227 ANKLE2Q86XL3 938 aa30.91■■■□□ 2.54
PTBP3-201ENST00000210227 THEMISQ8N1K5 641 aaPredicted RBP30.91■■■□□ 2.54
PTBP3-201ENST00000210227 NPHP4O75161 1426 aaPredicted RBP30.9■■■□□ 2.54
PTBP3-201ENST00000210227 ERVK-7P63135 1459 aa30.9■■■□□ 2.54
PTBP3-201ENST00000210227 KANK4Q5T7N3 995 aaPredicted RBP30.88■■■□□ 2.53
PTBP3-201ENST00000210227 DUOX2Q9NRD8 1548 aa30.88■■■□□ 2.53
PTBP3-201ENST00000210227 CFAP65Q6ZU64 1925 aaKnown RBP30.87■■■□□ 2.53
PTBP3-201ENST00000210227 LOC105371045A0A1W2PR82 267 aa30.87■■■□□ 2.53
PTBP3-201ENST00000210227 UBR1Q8IWV7 1749 aa30.85■■■□□ 2.53
PTBP3-201ENST00000210227 STRCP1A6NGW2 1772 aa30.84■■■□□ 2.53
PTBP3-201ENST00000210227 PRDM15P57071 1507 aaPredicted RBP30.83■■■□□ 2.53
PTBP3-201ENST00000210227 SCAF1Q9H7N4 1312 aaKnown RBP30.82■■■□□ 2.52
PTBP3-201ENST00000210227 ALKQ9UM73 1620 aa30.8■■■□□ 2.52
PTBP3-201ENST00000210227 SYNMO15061 1565 aa30.79■■■□□ 2.52
PTBP3-201ENST00000210227 PIP4K2BP78356 416 aa30.79■■■□□ 2.52
PTBP3-201ENST00000210227 PTPN23Q9H3S7 1636 aa30.79■■■□□ 2.52
PTBP3-201ENST00000210227 TOM1O60784 492 aa30.78■■■□□ 2.52
PTBP3-201ENST00000210227 MED1Q15648 1581 aaPredicted RBP30.77■■■□□ 2.52
PTBP3-201ENST00000210227 HSPA1LP34931 641 aa30.76■■■□□ 2.51
PTBP3-201ENST00000210227 ERBINQ96RT1 1412 aa30.75■■■□□ 2.51
PTBP3-201ENST00000210227 KIF15Q9NS87 1388 aa30.75■■■□□ 2.51
PTBP3-201ENST00000210227 ABCC5O15440 1437 aa30.73■■■□□ 2.51
PTBP3-201ENST00000210227 LRRC7Q96NW7 1537 aa30.71■■■□□ 2.51
PTBP3-201ENST00000210227 SCAF11Q99590 1463 aaKnown RBP30.7■■■□□ 2.51
PTBP3-201ENST00000210227 ARHGAP31Q2M1Z3 1444 aa30.7■■■□□ 2.5
PTBP3-201ENST00000210227 SLIT1O75093 1534 aa30.69■■■□□ 2.5
PTBP3-201ENST00000210227 ARHGAP23Q9P227 1491 aa30.68■■■□□ 2.5
PTBP3-201ENST00000210227 DAPK1P53355 1430 aa30.67■■■□□ 2.5
PTBP3-201ENST00000210227 PIK3C2BO00750 1634 aa30.67■■■□□ 2.5
PTBP3-201ENST00000210227 FGD6Q6ZV73 1430 aa30.64■■■□□ 2.49
PTBP3-201ENST00000210227 RRP7BPQ9NSQ0 103 aa30.63■■■□□ 2.49
PTBP3-201ENST00000210227 KDM5AP29375 1690 aaKnown RBP30.61■■■□□ 2.49
PTBP3-201ENST00000210227 XIRP1Q702N8 1843 aaKnown RBP30.61■■■□□ 2.49
PTBP3-201ENST00000210227 APLP2Q06481 763 aa30.57■■■□□ 2.48
PTBP3-201ENST00000210227 LMTK2Q8IWU2 1503 aa30.57■■■□□ 2.48
PTBP3-201ENST00000210227 KANK1Q14678 1352 aa30.56■■■□□ 2.48
PTBP3-201ENST00000210227 LTKP29376 864 aa30.56■■■□□ 2.48
PTBP3-201ENST00000210227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.56■■■□□ 2.48
PTBP3-201ENST00000210227 TXNDC2Q86VQ3 553 aa30.54■■■□□ 2.48
PTBP3-201ENST00000210227 EFCAB6Q5THR3 1501 aa30.53■■■□□ 2.48
PTBP3-201ENST00000210227 ANKRD30AQ9BXX3 1397 aa30.53■■■□□ 2.48
PTBP3-201ENST00000210227 TMEM2Q9UHN6 1383 aa30.52■■■□□ 2.48
PTBP3-201ENST00000210227 EID1Q9Y6B2 187 aa30.49■■■□□ 2.47
PTBP3-201ENST00000210227 CHIC2Q9UKJ5 165 aa30.47■■■□□ 2.47
PTBP3-201ENST00000210227 ADGRB3O60242 1522 aa30.47■■■□□ 2.47
PTBP3-201ENST00000210227 ADGRL2O95490 1459 aa30.46■■■□□ 2.47
PTBP3-201ENST00000210227 SENP3Q9H4L4 574 aaPredicted RBP30.46■■■□□ 2.47
PTBP3-201ENST00000210227 STAG3Q9UJ98 1225 aa30.44■■■□□ 2.46
PTBP3-201ENST00000210227 NOS1P29475 1434 aa30.43■■■□□ 2.46
PTBP3-201ENST00000210227 PHF23Q9BUL5 403 aaPredicted RBP30.42■■■□□ 2.46
PTBP3-201ENST00000210227 TET3O43151 1660 aa30.4■■■□□ 2.46
PTBP3-201ENST00000210227 IDI1Q13907 227 aa30.4■■■□□ 2.46
PTBP3-201ENST00000210227 MYO5BQ9ULV0 1848 aa30.38■■■□□ 2.45
PTBP3-201ENST00000210227 NWD1Q149M9 1564 aa30.36■■■□□ 2.45
PTBP3-201ENST00000210227 RPRD2Q5VT52 1461 aaKnown RBP30.35■■■□□ 2.45
PTBP3-201ENST00000210227 GCC2Q8IWJ2 1684 aa30.34■■■□□ 2.45
PTBP3-201ENST00000210227 TMEM94Q12767 1356 aa30.33■■■□□ 2.45
PTBP3-201ENST00000210227 ANKRD50Q9ULJ7 1429 aa30.31■■■□□ 2.44
PTBP3-201ENST00000210227 NKTRP30414 1462 aaKnown RBP30.31■■■□□ 2.44
PTBP3-201ENST00000210227 ROBO1Q9Y6N7 1651 aa30.3■■■□□ 2.44
PTBP3-201ENST00000210227 UNC13BO14795 1591 aa30.29■■■□□ 2.44
PTBP3-201ENST00000210227 FAM50AQ14320 339 aaKnown RBP30.29■■■□□ 2.44
PTBP3-201ENST00000210227 SLC26A8Q96RN1 970 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms