RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.41■□□□□ 0.382e-40■□□□□ 8.3
PTBP3-201ENST00000210227 DDX3XO00571 662 aaKnown RBP eCLIP19.31■□□□□ 0.689e-20■■■□□ 14.7
PTBP3-201ENST00000210227 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.64e-13■■■■■ 84
PTBP3-201ENST00000210227 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.884e-11■■■■■ 35.3
PTBP3-201ENST00000210227 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19■□□□□ 0.639e-11■■■□□ 14.9
PTBP3-201ENST00000210227 SF3B4Q15427 424 aaKnown RBP eCLIP17.82■□□□□ 0.443e-10■■■□□ 17.8
PTBP3-201ENST00000210227 TIA1P31483 386 aaKnown RBP eCLIP17.49■□□□□ 0.396e-10■■□□□ 13.8
PTBP3-201ENST00000210227 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.96■■□□□ 1.433e-9■■■■□ 20.4
PTBP3-201ENST00000210227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.67■■■□□ 2.821e-8■□□□□ 9.9
PTBP3-201ENST00000210227 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.81■□□□□ 0.62e-8■■■■■ 39.2
PTBP3-201ENST00000210227 AATFQ9NY61 560 aaKnown RBP eCLIP23.94■■□□□ 1.423e-8■□□□□ 10.6
PTBP3-201ENST00000210227 HNRNPLP14866 589 aaKnown RBP eCLIP20.76■□□□□ 0.919e-8■■■■■ 28.2
PTBP3-201ENST00000210227 NONOQ15233 471 aaKnown RBP eCLIP21.81■■□□□ 1.081e-7■■■■■ 55.5
PTBP3-201ENST00000210227 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.31■□□□□ 0.363e-7■■□□□ 14.5
PTBP3-201ENST00000210227 YBX3P16989 372 aaKnown RBP eCLIP27.1■■□□□ 1.934e-7■□□□□ 9
PTBP3-201ENST00000210227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.77■■■□□ 2.045e-7■■□□□ 13.5
PTBP3-201ENST00000210227 PTBP1P26599 531 aaKnown RBP eCLIP14.42□□□□□ -0.15e-7■■■■□ 23.3
PTBP3-201ENST00000210227 SF3B1O75533 1304 aaKnown RBP eCLIP21.59■■□□□ 1.056e-7■■■■■ 58.9
PTBP3-201ENST00000210227 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.47■■□□□ 1.351e-6■□□□□ 8.7
PTBP3-201ENST00000210227 KHSRPQ92945 711 aaKnown RBP eCLIP22.56■■□□□ 1.21e-6■■■□□ 16.5
PTBP3-201ENST00000210227 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.1■■□□□ 1.292e-6■■■■□ 20.5
PTBP3-201ENST00000210227 EIF4G2P78344 907 aaKnown RBP eCLIP26.74■■□□□ 1.873e-6■■■□□ 14.7
PTBP3-201ENST00000210227 HNRNPCP07910 306 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■■□□ 14.8
PTBP3-201ENST00000210227 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.05■■□□□ 1.444e-6■■■□□ 17.1
PTBP3-201ENST00000210227 EFTUD2Q15029 972 aaKnown RBP eCLIP18.01■□□□□ 0.476e-6■□□□□ 10.5
PTBP3-201ENST00000210227 HNRNPMP52272 730 aaKnown RBP eCLIP31.61■■■□□ 2.658e-6■□□□□ 8.6
PTBP3-201ENST00000210227 ILF3Q12906 894 aaKnown RBP eCLIP19.49■□□□□ 0.711e-5■■■■□ 19.3
Retrieved 27 of 27 RNA–protein pairs in 46.3 ms