RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 GDS1P41913 522 aa2.28□□□□□ -2.04
snR43snR43 GZF3P42944 551 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 COS4P43542 379 aa2.28□□□□□ -2.04
snR43snR43 YFL051CP43552 160 aa2.28□□□□□ -2.04
snR43snR43 BIT61P47041 543 aa2.28□□□□□ -2.04
snR43snR43 RPS12P48589 143 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 RNR4P49723 345 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 MAL13P53338 473 aa2.28□□□□□ -2.04
snR43snR43 OGG1P53397 376 aaPredicted RBP2.28□□□□□ -2.04
snR43snR43 GOR1P53839 350 aa2.28□□□□□ -2.04
snR43snR43 IDP3P53982 420 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 RPL15BP54780 204 aaPredicted RBP2.28□□□□□ -2.04
snR43snR43 TIM10P87108 93 aa2.28□□□□□ -2.04
snR43snR43 RRB1Q04225 511 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 BUR2Q05949 395 aa2.28□□□□□ -2.04
snR43snR43 DIA2Q08496 732 aaPredicted RBP2.28□□□□□ -2.04
snR43snR43 HNT3Q08702 217 aa2.28□□□□□ -2.04
snR43snR43 BSC1Q12140 328 aa2.28□□□□□ -2.04
snR43snR43 DBP10Q12389 995 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 POM34Q12445 299 aa2.28□□□□□ -2.04
snR43snR43 DET1Q99288 334 aaKnown RBP2.28□□□□□ -2.04
snR43snR43 SLH1P53327 1967 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 SIR3P06701 978 aa2.27□□□□□ -2.05
snR43snR43 RNA1P11745 407 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 KSS1P14681 368 aa2.27□□□□□ -2.05
snR43snR43 HSC82P15108 705 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 CTA1P15202 515 aa2.27□□□□□ -2.05
snR43snR43 NCP1P16603 691 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 KGD1P20967 1014 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 DBR1P24309 405 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 RAD51P25454 400 aa2.27□□□□□ -2.05
snR43snR43 BUB2P26448 306 aaPredicted RBP2.27□□□□□ -2.05
snR43snR43 DPB3P27344 201 aa2.27□□□□□ -2.05
snR43snR43 EHD3P28817 500 aa2.27□□□□□ -2.05
snR43snR43 SSE1P32589 693 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 SSO1P32867 290 aa2.27□□□□□ -2.05
snR43snR43 YPT7P32939 208 aa2.27□□□□□ -2.05
snR43snR43 LOS1P33418 1100 aaPredicted RBP2.27□□□□□ -2.05
snR43snR43 PTH2P34222 208 aa2.27□□□□□ -2.05
snR43snR43 YOR062CP36025 268 aa2.27□□□□□ -2.05
snR43snR43 ELF1P36053 145 aa2.27□□□□□ -2.05
snR43snR43 CAF4P36130 643 aa2.27□□□□□ -2.05
snR43snR43 MRPL39P36533 70 aa2.27□□□□□ -2.05
snR43snR43 APD1P38281 316 aa2.27□□□□□ -2.05
snR43snR43 STP2P38704 541 aa2.27□□□□□ -2.05
snR43snR43 ARN2P38724 620 aa2.27□□□□□ -2.05
snR43snR43 NSG1P38837 291 aa2.27□□□□□ -2.05
snR43snR43 YHR177WP38867 453 aa2.27□□□□□ -2.05
snR43snR43 UTP9P38882 575 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 FAA2P39518 744 aa2.27□□□□□ -2.05
snR43snR43 AIM2P39721 246 aa2.27□□□□□ -2.05
snR43snR43 PIG2P40187 538 aa2.27□□□□□ -2.05
snR43snR43 SMX2P40204 77 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 MEP2P41948 499 aa2.27□□□□□ -2.05
snR43snR43 CCT7P42943 550 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 FMP32P43557 207 aa2.27□□□□□ -2.05
snR43snR43 PTR3P43606 678 aa2.27□□□□□ -2.05
snR43snR43 AAD10P47182 288 aa2.27□□□□□ -2.05
snR43snR43 UBX4P54730 416 aa2.27□□□□□ -2.05
snR43snR43 TIM44Q01852 431 aa2.27□□□□□ -2.05
snR43snR43 SWP1Q02795 286 aa2.27□□□□□ -2.05
snR43snR43 MRPL1Q04599 285 aa2.27□□□□□ -2.05
snR43snR43 VBA4Q04602 768 aaKnown RBP2.27□□□□□ -2.05
snR43snR43 GMC2Q06201 188 aa2.27□□□□□ -2.05
snR43snR43 RAF1Q06891 181 aa2.27□□□□□ -2.05
snR43snR43 TMC1Q08422 150 aaPredicted RBP2.27□□□□□ -2.05
snR43snR43 NUR1Q12066 484 aa2.27□□□□□ -2.05
snR43snR43 APC9Q12107 265 aa2.27□□□□□ -2.05
snR43snR43 GEP5Q12393 293 aa2.27□□□□□ -2.05
snR43snR43 BLM10P43583 2143 aa2.27□□□□□ -2.05
snR43snR43 CDC39P25655 2108 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 CDC8P00572 216 aa2.26□□□□□ -2.05
snR43snR43 MRP13P12686 339 aa2.26□□□□□ -2.05
snR43snR43 PDX1P16451 410 aa2.26□□□□□ -2.05
snR43snR43 UTR1P21373 530 aa2.26□□□□□ -2.05
snR43snR43 MDH2P22133 377 aa2.26□□□□□ -2.05
snR43snR43 SCO1P23833 295 aa2.26□□□□□ -2.05
snR43snR43 CTR86P25355 563 aa2.26□□□□□ -2.05
snR43snR43 YCL049CP25577 312 aa2.26□□□□□ -2.05
snR43snR43 MSS1P32559 526 aaPredicted RBP2.26□□□□□ -2.05
snR43snR43 MTC6P38849 526 aa2.26□□□□□ -2.05
snR43snR43 FET3P38993 636 aa2.26□□□□□ -2.05
snR43snR43 ECM10P39987 644 aa2.26□□□□□ -2.05
snR43snR43 YJL068CP40363 299 aa2.26□□□□□ -2.05
snR43snR43 SMK1P41808 388 aa2.26□□□□□ -2.05
snR43snR43 ARC1P46672 376 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 GTO1P48239 356 aa2.26□□□□□ -2.05
snR43snR43 MSY1P48527 492 aa2.26□□□□□ -2.05
snR43snR43 TOM22P49334 152 aa2.26□□□□□ -2.05
snR43snR43 LSG1P53145 640 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 YGR151CP53287 111 aa2.26□□□□□ -2.05
snR43snR43 NOP19P53317 196 aaPredicted RBP2.26□□□□□ -2.05
snR43snR43 YNR068CP53754 272 aa2.26□□□□□ -2.05
snR43snR43 EAF7P53911 425 aaKnown RBP2.26□□□□□ -2.05
snR43snR43 SMX3P54999 86 aaPredicted RBP2.26□□□□□ -2.05
snR43snR43 YPL039WQ03080 316 aa2.26□□□□□ -2.05
snR43snR43 RIM13Q03792 727 aa2.26□□□□□ -2.05
snR43snR43 ARR1Q06596 294 aa2.26□□□□□ -2.05
snR43snR43 YLR413WQ06689 675 aa2.26□□□□□ -2.05
snR43snR43 YDL086WQ07505 273 aa2.26□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms