Protein–RNA interactions for Protein: Q08422

TMC1, AN1-type zinc finger protein TMC1, yeastyeast

Predicted RBP Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TMC1Q08422 YML009W-BYML009W-B 477 nt17.38■□□□□ 0.37
TMC1Q08422 NSR1YGR159C 1245 nt17.08■□□□□ 0.32
TMC1Q08422 NOP1YDL014W 984 nt17.02■□□□□ 0.32
TMC1Q08422 YKL036CYKL036C 393 nt15.96■□□□□ 0.15
TMC1Q08422 Q0297Q0297 156 nt15.03■□□□□ -0
TMC1Q08422 YJL027CYJL027C 417 nt14.93□□□□□ -0.02
TMC1Q08422 SRX1YKL086W 384 nt14.9□□□□□ -0.02
TMC1Q08422 MDJ1YFL016C 1536 nt14.88□□□□□ -0.03
TMC1Q08422 SCS3YGL126W 1143 nt14.68□□□□□ -0.06
TMC1Q08422 YCR051WYCR051W 669 nt14.09□□□□□ -0.15
TMC1Q08422 YOL085CYOL085C 342 nt13.82□□□□□ -0.2
TMC1Q08422 PKP1YIL042C 1185 nt13.53□□□□□ -0.24
TMC1Q08422 RPP1BYDL130W 321 nt13.47□□□□□ -0.25
TMC1Q08422 SCJ1YMR214W 1134 nt13.38□□□□□ -0.27
TMC1Q08422 TRN1tP(UGG)A 72 nt13.33□□□□□ -0.28
TMC1Q08422 SUF9tP(UGG)F 72 nt13.33□□□□□ -0.28
TMC1Q08422 SUF8tP(UGG)H 72 nt13.33□□□□□ -0.28
TMC1Q08422 tP(UGG)LtP(UGG)L 72 nt13.33□□□□□ -0.28
TMC1Q08422 SUF7tP(UGG)M 72 nt13.33□□□□□ -0.28
TMC1Q08422 tP(UGG)N1tP(UGG)N1 72 nt13.33□□□□□ -0.28
TMC1Q08422 tP(UGG)N2tP(UGG)N2 72 nt13.33□□□□□ -0.28
TMC1Q08422 tP(UGG)O1tP(UGG)O1 72 nt13.33□□□□□ -0.28
TMC1Q08422 SUF11tP(UGG)O2 72 nt13.33□□□□□ -0.28
TMC1Q08422 DBP2YNL112W 1641 nt13.32□□□□□ -0.28
TMC1Q08422 ATS1YAL020C 1002 nt13.19□□□□□ -0.3
TMC1Q08422 CCC1YLR220W 969 nt13.1□□□□□ -0.31
TMC1Q08422 PET122YER153C 765 nt12.83□□□□□ -0.36
TMC1Q08422 SCR1SCR1 522 nt12.74□□□□□ -0.37
TMC1Q08422 tP(UGG)O3tP(UGG)O3 72 nt12.67□□□□□ -0.38
TMC1Q08422 YBR190WYBR190W 312 nt12.65□□□□□ -0.38
TMC1Q08422 RVS167YDR388W 1449 nt12.54□□□□□ -0.4
TMC1Q08422 RRN5YLR141W 1092 nt12.46□□□□□ -0.41
TMC1Q08422 RTC3YHR087W 336 nt12.31□□□□□ -0.44
TMC1Q08422 YDJ1YNL064C 1230 nt12.28□□□□□ -0.44
TMC1Q08422 RSB1YOR049C 1065 nt12.27□□□□□ -0.45
TMC1Q08422 YER088W-BYER088W-B 147 nt12.24□□□□□ -0.45
TMC1Q08422 SHR5YOL110W 714 nt12.21□□□□□ -0.45
TMC1Q08422 PST2YDR032C 597 nt12.19□□□□□ -0.46
TMC1Q08422 GAR1YHR089C 618 nt11.9□□□□□ -0.5
TMC1Q08422 YKL097CYKL097C 411 nt11.82□□□□□ -0.52
TMC1Q08422 DEP1YAL013W 1218 nt11.7□□□□□ -0.54
TMC1Q08422 URN1YPR152C 1398 nt11.67□□□□□ -0.54
TMC1Q08422 SHU1YHL006C 453 nt11.61□□□□□ -0.55
TMC1Q08422 YNL208WYNL208W 600 nt11.6□□□□□ -0.55
TMC1Q08422 RPN10YHR200W 807 nt11.56□□□□□ -0.56
TMC1Q08422 TIR1YER011W 765 nt11.52□□□□□ -0.57
TMC1Q08422 OPI9YLR338W 858 nt11.47□□□□□ -0.57
TMC1Q08422 SSA1YAL005C 1929 nt11.33□□□□□ -0.6
TMC1Q08422 YOR139CYOR139C 393 nt11.33□□□□□ -0.6
TMC1Q08422 YAL037C-BYAL037C-B 975 nt11.3□□□□□ -0.6
TMC1Q08422 PUT4YOR348C 1884 nt11.29□□□□□ -0.6
TMC1Q08422 SAH1YER043C 1350 nt11.28□□□□□ -0.6
TMC1Q08422 SRB2YHR041C 633 nt11.21□□□□□ -0.61
TMC1Q08422 ARE1YCR048W 1833 nt11.17□□□□□ -0.62
TMC1Q08422 YJR018WYJR018W 363 nt11.14□□□□□ -0.63
TMC1Q08422 NPL3YDR432W 1245 nt11.13□□□□□ -0.63
TMC1Q08422 PUN1YLR414C 792 nt11.13□□□□□ -0.63
TMC1Q08422 YGR021WYGR021W 873 nt11.11□□□□□ -0.63
TMC1Q08422 YJR120WYJR120W 351 nt11.09□□□□□ -0.63
TMC1Q08422 HOM6YJR139C 1080 nt11.09□□□□□ -0.63
TMC1Q08422 WWM1YFL010C 636 nt11.05□□□□□ -0.64
TMC1Q08422 MNP1YGL068W 585 nt11.04□□□□□ -0.64
TMC1Q08422 YHR049C-AYHR049C-A 297 nt11□□□□□ -0.65
TMC1Q08422 YOL037CYOL037C 354 nt11□□□□□ -0.65
TMC1Q08422 RPP2BYDR382W 333 nt10.99□□□□□ -0.65
TMC1Q08422 SSA3YBL075C 1950 nt10.94□□□□□ -0.66
TMC1Q08422 PTC2YER089C 1395 nt10.91□□□□□ -0.66
TMC1Q08422 RKM5YLR137W 1104 nt10.91□□□□□ -0.66
TMC1Q08422 YFL021C-AYFL021C-A 855 nt10.9□□□□□ -0.66
TMC1Q08422 POA1YBR022W 534 nt10.9□□□□□ -0.66
TMC1Q08422 tM(CAU)CtM(CAU)C 72 nt10.86□□□□□ -0.67
TMC1Q08422 IMT4tM(CAU)E 72 nt10.86□□□□□ -0.67
TMC1Q08422 IMT3tM(CAU)J3 72 nt10.86□□□□□ -0.67
TMC1Q08422 IMT1tM(CAU)O1 72 nt10.86□□□□□ -0.67
TMC1Q08422 IMT2tM(CAU)P 72 nt10.86□□□□□ -0.67
TMC1Q08422 BDH2YAL061W 1254 nt10.84□□□□□ -0.67
TMC1Q08422 LSM3YLR438C-A 270 nt10.76□□□□□ -0.69
TMC1Q08422 NAB2YGL122C 1578 nt10.76□□□□□ -0.69
TMC1Q08422 INM2YDR287W 879 nt10.72□□□□□ -0.69
TMC1Q08422 BUD23YCR047C 828 nt10.71□□□□□ -0.69
TMC1Q08422 YLR281CYLR281C 468 nt10.71□□□□□ -0.69
TMC1Q08422 FIS1YIL065C 468 nt10.69□□□□□ -0.7
TMC1Q08422 DAL1YIR027C 1383 nt10.68□□□□□ -0.7
TMC1Q08422 YBL100CYBL100C 315 nt10.66□□□□□ -0.7
TMC1Q08422 PUS2YGL063W 1113 nt10.65□□□□□ -0.7
TMC1Q08422 BSC6YOL137W 1494 nt10.65□□□□□ -0.7
TMC1Q08422 WHI5YOR083W 888 nt10.61□□□□□ -0.71
TMC1Q08422 PHO4YFR034C 939 nt10.58□□□□□ -0.72
TMC1Q08422 FPR4YLR449W 1179 nt10.58□□□□□ -0.72
TMC1Q08422 MOT3YMR070W 1473 nt10.55□□□□□ -0.72
TMC1Q08422 TRM9YML014W 840 nt10.55□□□□□ -0.72
TMC1Q08422 FUN26YAL022C 1554 nt10.55□□□□□ -0.72
TMC1Q08422 CCT6YDR188W 1641 nt10.49□□□□□ -0.73
TMC1Q08422 DSK2YMR276W 1122 nt10.44□□□□□ -0.74
TMC1Q08422 YPR011CYPR011C 981 nt10.42□□□□□ -0.74
TMC1Q08422 IMP2'YIL154C 1041 nt10.41□□□□□ -0.74
TMC1Q08422 YLR154C-GYLR154C-G 150 nt10.41□□□□□ -0.74
TMC1Q08422 YLR236CYLR236C 324 nt10.41□□□□□ -0.74
TMC1Q08422 FMP45YDL222C 930 nt10.38□□□□□ -0.75
TMC1Q08422 SUF2tP(AGG)C 72 nt10.34□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 16.7 ms