Protein–RNA interactions for Protein: Q06891

RAF1, Trans-acting factor D, yeastyeast

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAF1Q06891 YML009W-BYML009W-B 477 nt18.02■□□□□ 0.48
RAF1Q06891 NSR1YGR159C 1245 nt17.84■□□□□ 0.45
RAF1Q06891 NOP1YDL014W 984 nt17.64■□□□□ 0.41
RAF1Q06891 YKL036CYKL036C 393 nt16.34■□□□□ 0.21
RAF1Q06891 MDJ1YFL016C 1536 nt15.64■□□□□ 0.09
RAF1Q06891 Q0297Q0297 156 nt15.44■□□□□ 0.06
RAF1Q06891 SRX1YKL086W 384 nt15.37■□□□□ 0.05
RAF1Q06891 YJL027CYJL027C 417 nt15.28■□□□□ 0.04
RAF1Q06891 SCS3YGL126W 1143 nt14.9□□□□□ -0.02
RAF1Q06891 YCR051WYCR051W 669 nt14.58□□□□□ -0.08
RAF1Q06891 YOL085CYOL085C 342 nt14.13□□□□□ -0.15
RAF1Q06891 DBP2YNL112W 1641 nt13.9□□□□□ -0.19
RAF1Q06891 PKP1YIL042C 1185 nt13.86□□□□□ -0.19
RAF1Q06891 RPP1BYDL130W 321 nt13.85□□□□□ -0.19
RAF1Q06891 TRN1tP(UGG)A 72 nt13.8□□□□□ -0.2
RAF1Q06891 SUF9tP(UGG)F 72 nt13.8□□□□□ -0.2
RAF1Q06891 SUF8tP(UGG)H 72 nt13.8□□□□□ -0.2
RAF1Q06891 tP(UGG)LtP(UGG)L 72 nt13.8□□□□□ -0.2
RAF1Q06891 SUF7tP(UGG)M 72 nt13.8□□□□□ -0.2
RAF1Q06891 tP(UGG)N1tP(UGG)N1 72 nt13.8□□□□□ -0.2
RAF1Q06891 tP(UGG)N2tP(UGG)N2 72 nt13.8□□□□□ -0.2
RAF1Q06891 tP(UGG)O1tP(UGG)O1 72 nt13.8□□□□□ -0.2
RAF1Q06891 SUF11tP(UGG)O2 72 nt13.8□□□□□ -0.2
RAF1Q06891 CCC1YLR220W 969 nt13.66□□□□□ -0.22
RAF1Q06891 SCJ1YMR214W 1134 nt13.42□□□□□ -0.26
RAF1Q06891 ATS1YAL020C 1002 nt13.38□□□□□ -0.27
RAF1Q06891 YBR190WYBR190W 312 nt13.37□□□□□ -0.27
RAF1Q06891 RVS167YDR388W 1449 nt13.2□□□□□ -0.3
RAF1Q06891 PET122YER153C 765 nt13.18□□□□□ -0.3
RAF1Q06891 SCR1SCR1 522 nt13.15□□□□□ -0.3
RAF1Q06891 tP(UGG)O3tP(UGG)O3 72 nt13.1□□□□□ -0.31
RAF1Q06891 RTC3YHR087W 336 nt13.08□□□□□ -0.32
RAF1Q06891 RRN5YLR141W 1092 nt12.82□□□□□ -0.36
RAF1Q06891 SHR5YOL110W 714 nt12.72□□□□□ -0.37
RAF1Q06891 YDJ1YNL064C 1230 nt12.7□□□□□ -0.38
RAF1Q06891 RSB1YOR049C 1065 nt12.61□□□□□ -0.39
RAF1Q06891 YER088W-BYER088W-B 147 nt12.58□□□□□ -0.4
RAF1Q06891 PST2YDR032C 597 nt12.37□□□□□ -0.43
RAF1Q06891 GAR1YHR089C 618 nt12.36□□□□□ -0.43
RAF1Q06891 URN1YPR152C 1398 nt12.28□□□□□ -0.44
RAF1Q06891 DEP1YAL013W 1218 nt12.27□□□□□ -0.45
RAF1Q06891 RPN10YHR200W 807 nt12.17□□□□□ -0.46
RAF1Q06891 YNL208WYNL208W 600 nt12.15□□□□□ -0.46
RAF1Q06891 OPI9YLR338W 858 nt12.08□□□□□ -0.48
RAF1Q06891 PUT4YOR348C 1884 nt12.04□□□□□ -0.48
RAF1Q06891 TIR1YER011W 765 nt11.96□□□□□ -0.49
RAF1Q06891 YKL097CYKL097C 411 nt11.96□□□□□ -0.49
RAF1Q06891 SAH1YER043C 1350 nt11.94□□□□□ -0.5
RAF1Q06891 ARE1YCR048W 1833 nt11.83□□□□□ -0.52
RAF1Q06891 SHU1YHL006C 453 nt11.81□□□□□ -0.52
RAF1Q06891 SSA3YBL075C 1950 nt11.81□□□□□ -0.52
RAF1Q06891 SSA1YAL005C 1929 nt11.76□□□□□ -0.53
RAF1Q06891 PUN1YLR414C 792 nt11.74□□□□□ -0.53
RAF1Q06891 YJR018WYJR018W 363 nt11.72□□□□□ -0.53
RAF1Q06891 YHR049C-AYHR049C-A 297 nt11.67□□□□□ -0.54
RAF1Q06891 POA1YBR022W 534 nt11.64□□□□□ -0.55
RAF1Q06891 YAL037C-BYAL037C-B 975 nt11.58□□□□□ -0.56
RAF1Q06891 RPP2BYDR382W 333 nt11.57□□□□□ -0.56
RAF1Q06891 PTC2YER089C 1395 nt11.55□□□□□ -0.56
RAF1Q06891 SRB2YHR041C 633 nt11.52□□□□□ -0.57
RAF1Q06891 YJR120WYJR120W 351 nt11.49□□□□□ -0.57
RAF1Q06891 YGR021WYGR021W 873 nt11.47□□□□□ -0.57
RAF1Q06891 BUD23YCR047C 828 nt11.43□□□□□ -0.58
RAF1Q06891 WWM1YFL010C 636 nt11.42□□□□□ -0.58
RAF1Q06891 NAB2YGL122C 1578 nt11.41□□□□□ -0.58
RAF1Q06891 YOR139CYOR139C 393 nt11.41□□□□□ -0.58
RAF1Q06891 BSC6YOL137W 1494 nt11.4□□□□□ -0.58
RAF1Q06891 HOM6YJR139C 1080 nt11.38□□□□□ -0.59
RAF1Q06891 NPL3YDR432W 1245 nt11.34□□□□□ -0.59
RAF1Q06891 BDH2YAL061W 1254 nt11.33□□□□□ -0.6
RAF1Q06891 INM2YDR287W 879 nt11.32□□□□□ -0.6
RAF1Q06891 MNP1YGL068W 585 nt11.31□□□□□ -0.6
RAF1Q06891 DAL1YIR027C 1383 nt11.28□□□□□ -0.6
RAF1Q06891 YFL021C-AYFL021C-A 855 nt11.28□□□□□ -0.6
RAF1Q06891 FPR4YLR449W 1179 nt11.24□□□□□ -0.61
RAF1Q06891 YOL037CYOL037C 354 nt11.24□□□□□ -0.61
RAF1Q06891 LSM3YLR438C-A 270 nt11.23□□□□□ -0.61
RAF1Q06891 RKM5YLR137W 1104 nt11.22□□□□□ -0.61
RAF1Q06891 FIS1YIL065C 468 nt11.21□□□□□ -0.61
RAF1Q06891 YBL100CYBL100C 315 nt11.21□□□□□ -0.61
RAF1Q06891 PHO4YFR034C 939 nt11.15□□□□□ -0.62
RAF1Q06891 TRM9YML014W 840 nt11.11□□□□□ -0.63
RAF1Q06891 FUN26YAL022C 1554 nt11.07□□□□□ -0.64
RAF1Q06891 SPT5YML010W 3192 nt11□□□□□ -0.65
RAF1Q06891 tM(CAU)CtM(CAU)C 72 nt10.98□□□□□ -0.65
RAF1Q06891 IMT4tM(CAU)E 72 nt10.98□□□□□ -0.65
RAF1Q06891 IMT3tM(CAU)J3 72 nt10.98□□□□□ -0.65
RAF1Q06891 IMT1tM(CAU)O1 72 nt10.98□□□□□ -0.65
RAF1Q06891 IMT2tM(CAU)P 72 nt10.98□□□□□ -0.65
RAF1Q06891 CCT6YDR188W 1641 nt10.98□□□□□ -0.65
RAF1Q06891 YLR281CYLR281C 468 nt10.95□□□□□ -0.66
RAF1Q06891 SUF2tP(AGG)C 72 nt10.91□□□□□ -0.66
RAF1Q06891 SUF10tP(AGG)N 72 nt10.91□□□□□ -0.66
RAF1Q06891 ALF1YNL148C 765 nt10.91□□□□□ -0.66
RAF1Q06891 YPS1YLR120C 1710 nt10.89□□□□□ -0.67
RAF1Q06891 WHI5YOR083W 888 nt10.89□□□□□ -0.67
RAF1Q06891 PUS2YGL063W 1113 nt10.88□□□□□ -0.67
RAF1Q06891 YDR095CYDR095C 411 nt10.84□□□□□ -0.67
RAF1Q06891 YLR154C-GYLR154C-G 150 nt10.79□□□□□ -0.68
RAF1Q06891 YHR165W-AYHR165W-A 312 nt10.78□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms