Protein–RNA interactions for Protein: P53145

LSG1, Large subunit GTPase 1, yeastyeast

Known RBP Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSG1P53145 YML009W-BYML009W-B 477 nt18.66■□□□□ 0.58
LSG1P53145 NSR1YGR159C 1245 nt18.59■□□□□ 0.57
LSG1P53145 NOP1YDL014W 984 nt18.18■□□□□ 0.5
LSG1P53145 YKL036CYKL036C 393 nt16.71■□□□□ 0.27
LSG1P53145 MDJ1YFL016C 1536 nt16.64■□□□□ 0.25
LSG1P53145 Q0297Q0297 156 nt15.87■□□□□ 0.13
LSG1P53145 SRX1YKL086W 384 nt15.85■□□□□ 0.13
LSG1P53145 YJL027CYJL027C 417 nt15.59■□□□□ 0.09
LSG1P53145 SSA3YBL075C 1950 nt15.23■□□□□ 0.03
LSG1P53145 SCS3YGL126W 1143 nt15.16■□□□□ 0.02
LSG1P53145 YCR051WYCR051W 669 nt15.03■□□□□ -0
LSG1P53145 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
LSG1P53145 YOL085CYOL085C 342 nt14.45□□□□□ -0.1
LSG1P53145 TRN1tP(UGG)A 72 nt14.34□□□□□ -0.11
LSG1P53145 SUF9tP(UGG)F 72 nt14.34□□□□□ -0.11
LSG1P53145 SUF8tP(UGG)H 72 nt14.34□□□□□ -0.11
LSG1P53145 tP(UGG)LtP(UGG)L 72 nt14.34□□□□□ -0.11
LSG1P53145 SUF7tP(UGG)M 72 nt14.34□□□□□ -0.11
LSG1P53145 tP(UGG)N1tP(UGG)N1 72 nt14.34□□□□□ -0.11
LSG1P53145 tP(UGG)N2tP(UGG)N2 72 nt14.34□□□□□ -0.11
LSG1P53145 tP(UGG)O1tP(UGG)O1 72 nt14.34□□□□□ -0.11
LSG1P53145 SUF11tP(UGG)O2 72 nt14.34□□□□□ -0.11
LSG1P53145 YBR190WYBR190W 312 nt14.33□□□□□ -0.12
LSG1P53145 RPP1BYDL130W 321 nt14.24□□□□□ -0.13
LSG1P53145 PKP1YIL042C 1185 nt14.21□□□□□ -0.13
LSG1P53145 CCC1YLR220W 969 nt14.18□□□□□ -0.14
LSG1P53145 RTC3YHR087W 336 nt13.98□□□□□ -0.17
LSG1P53145 RVS167YDR388W 1449 nt13.78□□□□□ -0.2
LSG1P53145 SCJ1YMR214W 1134 nt13.62□□□□□ -0.23
LSG1P53145 PET122YER153C 765 nt13.58□□□□□ -0.24
LSG1P53145 tP(UGG)O3tP(UGG)O3 72 nt13.55□□□□□ -0.24
LSG1P53145 ATS1YAL020C 1002 nt13.55□□□□□ -0.24
LSG1P53145 SCR1SCR1 522 nt13.49□□□□□ -0.25
LSG1P53145 PUT4YOR348C 1884 nt13.35□□□□□ -0.27
LSG1P53145 SHR5YOL110W 714 nt13.26□□□□□ -0.29
LSG1P53145 RRN5YLR141W 1092 nt13.18□□□□□ -0.3
LSG1P53145 YDJ1YNL064C 1230 nt13.13□□□□□ -0.31
LSG1P53145 SSA4YER103W 1929 nt13.02□□□□□ -0.32
LSG1P53145 ARE1YCR048W 1833 nt12.97□□□□□ -0.33
LSG1P53145 YER088W-BYER088W-B 147 nt12.93□□□□□ -0.34
LSG1P53145 RSB1YOR049C 1065 nt12.93□□□□□ -0.34
LSG1P53145 PAC11YDR488C 1602 nt12.92□□□□□ -0.34
LSG1P53145 URN1YPR152C 1398 nt12.92□□□□□ -0.34
LSG1P53145 POA1YBR022W 534 nt12.88□□□□□ -0.35
LSG1P53145 SAH1YER043C 1350 nt12.85□□□□□ -0.35
LSG1P53145 DEP1YAL013W 1218 nt12.85□□□□□ -0.35
LSG1P53145 OPI9YLR338W 858 nt12.84□□□□□ -0.35
LSG1P53145 GAR1YHR089C 618 nt12.82□□□□□ -0.36
LSG1P53145 YHR049C-AYHR049C-A 297 nt12.8□□□□□ -0.36
LSG1P53145 SPT5YML010W 3192 nt12.78□□□□□ -0.36
LSG1P53145 RPN10YHR200W 807 nt12.76□□□□□ -0.37
LSG1P53145 BSC6YOL137W 1494 nt12.7□□□□□ -0.38
LSG1P53145 YNL208WYNL208W 600 nt12.69□□□□□ -0.38
LSG1P53145 NVJ2YPR091C 2313 nt12.69□□□□□ -0.38
LSG1P53145 BDF1YLR399C 2061 nt12.63□□□□□ -0.39
LSG1P53145 PST2YDR032C 597 nt12.54□□□□□ -0.4
LSG1P53145 PUN1YLR414C 792 nt12.47□□□□□ -0.41
LSG1P53145 TAT1YBR069C 1860 nt12.46□□□□□ -0.41
LSG1P53145 BUD23YCR047C 828 nt12.46□□□□□ -0.41
LSG1P53145 TIR1YER011W 765 nt12.4□□□□□ -0.42
LSG1P53145 PTC2YER089C 1395 nt12.37□□□□□ -0.43
LSG1P53145 YJR018WYJR018W 363 nt12.3□□□□□ -0.44
LSG1P53145 NAB2YGL122C 1578 nt12.28□□□□□ -0.44
LSG1P53145 FPS1YLL043W 2010 nt12.28□□□□□ -0.44
LSG1P53145 SSA1YAL005C 1929 nt12.22□□□□□ -0.45
LSG1P53145 RPP2BYDR382W 333 nt12.09□□□□□ -0.47
LSG1P53145 YKL097CYKL097C 411 nt12.07□□□□□ -0.48
LSG1P53145 FIS1YIL065C 468 nt12.06□□□□□ -0.48
LSG1P53145 YJR120WYJR120W 351 nt12.05□□□□□ -0.48
LSG1P53145 DAL1YIR027C 1383 nt12.05□□□□□ -0.48
LSG1P53145 SHU1YHL006C 453 nt12.04□□□□□ -0.48
LSG1P53145 FPR4YLR449W 1179 nt11.98□□□□□ -0.49
LSG1P53145 MEP2YNL142W 1500 nt11.97□□□□□ -0.49
LSG1P53145 SRB2YHR041C 633 nt11.96□□□□□ -0.49
LSG1P53145 YJL225CYJL225C 5277 nt11.95□□□□□ -0.5
LSG1P53145 INM2YDR287W 879 nt11.93□□□□□ -0.5
LSG1P53145 PHO4YFR034C 939 nt11.92□□□□□ -0.5
LSG1P53145 YPS1YLR120C 1710 nt11.86□□□□□ -0.51
LSG1P53145 YAL037C-BYAL037C-B 975 nt11.83□□□□□ -0.52
LSG1P53145 WWM1YFL010C 636 nt11.82□□□□□ -0.52
LSG1P53145 YGR021WYGR021W 873 nt11.81□□□□□ -0.52
LSG1P53145 BDH2YAL061W 1254 nt11.81□□□□□ -0.52
LSG1P53145 YBL100CYBL100C 315 nt11.76□□□□□ -0.53
LSG1P53145 DCW1YKL046C 1350 nt11.76□□□□□ -0.53
LSG1P53145 YHR165W-AYHR165W-A 312 nt11.75□□□□□ -0.53
LSG1P53145 HOM6YJR139C 1080 nt11.72□□□□□ -0.53
LSG1P53145 YDR095CYDR095C 411 nt11.71□□□□□ -0.53
LSG1P53145 YFL021C-AYFL021C-A 855 nt11.68□□□□□ -0.54
LSG1P53145 UME6YDR207C 2511 nt11.68□□□□□ -0.54
LSG1P53145 LSM3YLR438C-A 270 nt11.67□□□□□ -0.54
LSG1P53145 YBR220CYBR220C 1683 nt11.65□□□□□ -0.55
LSG1P53145 MNP1YGL068W 585 nt11.64□□□□□ -0.55
LSG1P53145 EMI2YDR516C 1503 nt11.61□□□□□ -0.55
LSG1P53145 FUN26YAL022C 1554 nt11.61□□□□□ -0.55
LSG1P53145 PCH2YBR186W 1695 nt11.6□□□□□ -0.55
LSG1P53145 TRM9YML014W 840 nt11.6□□□□□ -0.55
LSG1P53145 YMR090WYMR090W 684 nt11.59□□□□□ -0.55
LSG1P53145 GUT2YIL155C 1950 nt11.58□□□□□ -0.56
LSG1P53145 RKM5YLR137W 1104 nt11.56□□□□□ -0.56
LSG1P53145 SEC11YIR022W 504 nt11.53□□□□□ -0.56
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms