RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W GEA1P47102 1408 aaPredicted RBP1.45□□□□□ -2.18
HIT1YJR055W RSF2P46974 1380 aa1.45□□□□□ -2.18
HIT1YJR055W SRB8P25648 1427 aa1.44□□□□□ -2.18
HIT1YJR055W MSP1P28737 362 aa1.44□□□□□ -2.18
HIT1YJR055W YSC83P32792 385 aa1.44□□□□□ -2.18
HIT1YJR055W CBF5P33322 483 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
HIT1YJR055W SKT5P34226 696 aa1.44□□□□□ -2.18
HIT1YJR055W AST1P35183 429 aa1.44□□□□□ -2.18
HIT1YJR055W SMP1P38128 452 aa1.44□□□□□ -2.18
HIT1YJR055W WSC4P38739 605 aa1.44□□□□□ -2.18
HIT1YJR055W GEP4P38812 185 aa1.44□□□□□ -2.18
HIT1YJR055W EFM4P40516 257 aa1.44□□□□□ -2.18
HIT1YJR055W YPS6P40583 537 aa1.44□□□□□ -2.18
HIT1YJR055W PAC11P40960 533 aa1.44□□□□□ -2.18
HIT1YJR055W STB1P42845 420 aa1.44□□□□□ -2.18
HIT1YJR055W YGR117CP53270 476 aa1.44□□□□□ -2.18
HIT1YJR055W YLR456WQ06199 204 aa1.44□□□□□ -2.18
HIT1YJR055W NSE1Q07913 336 aa1.44□□□□□ -2.18
HIT1YJR055W RPN5Q12250 445 aaKnown RBP1.44□□□□□ -2.18
HIT1YJR055W GLE1Q12315 538 aa1.44□□□□□ -2.18
HIT1YJR055W HMS1Q12398 434 aa1.44□□□□□ -2.18
HIT1YJR055W YOP1Q12402 180 aa1.44□□□□□ -2.18
HIT1YJR055W GCN1P33892 2672 aaKnown RBP1.44□□□□□ -2.18
HIT1YJR055W OPI3P05375 206 aa1.43□□□□□ -2.18
HIT1YJR055W SSC1P0CS90 654 aaKnown RBP1.43□□□□□ -2.18
HIT1YJR055W ASP3-2P0CX77 362 aa1.43□□□□□ -2.18
HIT1YJR055W ASP3-3P0CX78 362 aa1.43□□□□□ -2.18
HIT1YJR055W ASP3-4P0CX79 362 aa1.43□□□□□ -2.18
HIT1YJR055W ASP3-1P0CZ17 362 aa1.43□□□□□ -2.18
HIT1YJR055W QDR3P38227 689 aa1.43□□□□□ -2.18
HIT1YJR055W ECM34P38728 170 aa1.43□□□□□ -2.18
HIT1YJR055W GPI16P38875 610 aa1.43□□□□□ -2.18
HIT1YJR055W STN1P38960 494 aa1.43□□□□□ -2.18
HIT1YJR055W JEM1P40358 645 aa1.43□□□□□ -2.18
HIT1YJR055W SNL1P40548 159 aa1.43□□□□□ -2.18
HIT1YJR055W YJL144WP47009 104 aa1.43□□□□□ -2.18
HIT1YJR055W VEL1P53058 206 aa1.43□□□□□ -2.18
HIT1YJR055W CWC22P53333 577 aaKnown RBP1.43□□□□□ -2.18
HIT1YJR055W ZRG17P53735 605 aa1.43□□□□□ -2.18
HIT1YJR055W ECM7Q06200 448 aa1.43□□□□□ -2.18
HIT1YJR055W LDS2Q08218 356 aa1.43□□□□□ -2.18
HIT1YJR055W UAF30Q08747 228 aa1.43□□□□□ -2.18
HIT1YJR055W TAO3P40468 2376 aa1.42□□□□□ -2.18
HIT1YJR055W COX3P00420 269 aa1.42□□□□□ -2.18
HIT1YJR055W RPL1AP0CX43 217 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W RPL1BP0CX44 217 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W CUP1-1P0CX80 61 aa1.42□□□□□ -2.18
HIT1YJR055W CUP1-2P0CX81 61 aa1.42□□□□□ -2.18
HIT1YJR055W SRB2P34162 210 aa1.42□□□□□ -2.18
HIT1YJR055W LSM12P38828 187 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W KEG1P43614 200 aa1.42□□□□□ -2.18
HIT1YJR055W ASN2P49090 572 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W YDR541CQ03049 344 aa1.42□□□□□ -2.18
HIT1YJR055W RCF1Q03713 159 aa1.42□□□□□ -2.18
HIT1YJR055W YDR115WQ04598 105 aa1.42□□□□□ -2.18
HIT1YJR055W YDR341CQ05506 607 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W ASA1Q06822 443 aa1.42□□□□□ -2.18
HIT1YJR055W PCL9Q12477 304 aa1.42□□□□□ -2.18
HIT1YJR055W APC1P53886 1748 aa1.42□□□□□ -2.18
HIT1YJR055W CFT1Q06632 1357 aaKnown RBP1.42□□□□□ -2.18
HIT1YJR055W TY4B-HP0C2J7 1802 aa1.42□□□□□ -2.18
HIT1YJR055W TY4B-JP47024 1803 aa1.42□□□□□ -2.18
HIT1YJR055W TRA1P38811 3744 aa1.41□□□□□ -2.18
HIT1YJR055W TOA1P32773 286 aa1.41□□□□□ -2.18
HIT1YJR055W MCR1P36060 302 aaKnown RBP1.41□□□□□ -2.18
HIT1YJR055W SPP381P38282 291 aaPredicted RBP1.41□□□□□ -2.18
HIT1YJR055W GDT1P38301 280 aaPredicted RBP1.41□□□□□ -2.18
HIT1YJR055W LRP1P38801 184 aaKnown RBP1.41□□□□□ -2.18
HIT1YJR055W TRR2P38816 342 aa1.41□□□□□ -2.18
HIT1YJR055W SEC28P40509 296 aaKnown RBP1.41□□□□□ -2.18
HIT1YJR055W EAF6P47128 113 aa1.41□□□□□ -2.18
HIT1YJR055W STE24P47154 453 aa1.41□□□□□ -2.18
HIT1YJR055W TOM22P49334 152 aa1.41□□□□□ -2.18
HIT1YJR055W RTT102P53330 157 aa1.41□□□□□ -2.18
HIT1YJR055W EOS1P53938 366 aa1.41□□□□□ -2.18
HIT1YJR055W PRP38Q00723 242 aaPredicted RBP1.41□□□□□ -2.18
HIT1YJR055W MEH1Q02205 184 aa1.41□□□□□ -2.18
HIT1YJR055W GAS2Q06135 555 aa1.41□□□□□ -2.18
HIT1YJR055W YLR177WQ06251 628 aa1.41□□□□□ -2.18
HIT1YJR055W AAD15Q08361 143 aa1.41□□□□□ -2.18
HIT1YJR055W DDC1Q08949 612 aa1.41□□□□□ -2.18
HIT1YJR055W SRN2Q99176 213 aa1.41□□□□□ -2.18
HIT1YJR055W MEX67Q99257 599 aaKnown RBP1.41□□□□□ -2.18
HIT1YJR055W KRE5P22023 1365 aa1.41□□□□□ -2.18
HIT1YJR055W NUP192P47054 1683 aa1.4□□□□□ -2.19
HIT1YJR055W TY3B-IQ7LHG5 1498 aaKnown RBP1.4□□□□□ -2.19
HIT1YJR055W AUS1Q08409 1394 aa1.4□□□□□ -2.19
HIT1YJR055W YPR096CO13587 100 aa1.4□□□□□ -2.19
HIT1YJR055W PAB1P04147 577 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
HIT1YJR055W RPL12AP0CX53 165 aaKnown RBP1.4□□□□□ -2.19
HIT1YJR055W RPL12BP0CX54 165 aa1.4□□□□□ -2.19
HIT1YJR055W MRPL8P22353 238 aa1.4□□□□□ -2.19
HIT1YJR055W ZIP1P31111 875 aa1.4□□□□□ -2.19
HIT1YJR055W TIR2P33890 251 aa1.4□□□□□ -2.19
HIT1YJR055W COS9P36034 407 aa1.4□□□□□ -2.19
HIT1YJR055W FRM2P37261 193 aa1.4□□□□□ -2.19
HIT1YJR055W HEM14P40012 539 aa1.4□□□□□ -2.19
HIT1YJR055W SEC27P41811 889 aaKnown RBP1.4□□□□□ -2.19
HIT1YJR055W TRF5P48561 642 aaKnown RBP1.4□□□□□ -2.19
HIT1YJR055W MPS2P53159 387 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms