Protein–RNA interactions for Protein: Q00723

PRP38, Pre-mRNA-splicing factor 38, yeastyeast

Predicted RBP Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP38Q00723 NSR1YGR159C 1245 nt19.73■□□□□ 0.75
PRP38Q00723 YML009W-BYML009W-B 477 nt19.63■□□□□ 0.73
PRP38Q00723 NOP1YDL014W 984 nt18.96■□□□□ 0.63
PRP38Q00723 MDJ1YFL016C 1536 nt17.81■□□□□ 0.44
PRP38Q00723 YKL036CYKL036C 393 nt17.5■□□□□ 0.39
PRP38Q00723 Q0297Q0297 156 nt16.55■□□□□ 0.24
PRP38Q00723 SRX1YKL086W 384 nt16.55■□□□□ 0.24
PRP38Q00723 YJL027CYJL027C 417 nt16.41■□□□□ 0.22
PRP38Q00723 SCS3YGL126W 1143 nt15.92■□□□□ 0.14
PRP38Q00723 YCR051WYCR051W 669 nt15.7■□□□□ 0.1
PRP38Q00723 DBP2YNL112W 1641 nt15.62■□□□□ 0.09
PRP38Q00723 YBR190WYBR190W 312 nt15.24■□□□□ 0.03
PRP38Q00723 TRN1tP(UGG)A 72 nt15.14■□□□□ 0.01
PRP38Q00723 SUF9tP(UGG)F 72 nt15.14■□□□□ 0.01
PRP38Q00723 SUF8tP(UGG)H 72 nt15.14■□□□□ 0.01
PRP38Q00723 tP(UGG)LtP(UGG)L 72 nt15.14■□□□□ 0.01
PRP38Q00723 SUF7tP(UGG)M 72 nt15.14■□□□□ 0.01
PRP38Q00723 tP(UGG)N1tP(UGG)N1 72 nt15.14■□□□□ 0.01
PRP38Q00723 tP(UGG)N2tP(UGG)N2 72 nt15.14■□□□□ 0.01
PRP38Q00723 tP(UGG)O1tP(UGG)O1 72 nt15.14■□□□□ 0.01
PRP38Q00723 SUF11tP(UGG)O2 72 nt15.14■□□□□ 0.01
PRP38Q00723 YOL085CYOL085C 342 nt15.11■□□□□ 0.01
PRP38Q00723 CCC1YLR220W 969 nt15□□□□□ -0.01
PRP38Q00723 RTC3YHR087W 336 nt14.91□□□□□ -0.02
PRP38Q00723 RPP1BYDL130W 321 nt14.85□□□□□ -0.03
PRP38Q00723 PKP1YIL042C 1185 nt14.83□□□□□ -0.04
PRP38Q00723 RVS167YDR388W 1449 nt14.65□□□□□ -0.06
PRP38Q00723 SCJ1YMR214W 1134 nt14.51□□□□□ -0.09
PRP38Q00723 ATS1YAL020C 1002 nt14.28□□□□□ -0.12
PRP38Q00723 tP(UGG)O3tP(UGG)O3 72 nt14.23□□□□□ -0.13
PRP38Q00723 PET122YER153C 765 nt14.19□□□□□ -0.14
PRP38Q00723 SCR1SCR1 522 nt14.1□□□□□ -0.15
PRP38Q00723 SHR5YOL110W 714 nt14.06□□□□□ -0.16
PRP38Q00723 PUT4YOR348C 1884 nt14.05□□□□□ -0.16
PRP38Q00723 URN1YPR152C 1398 nt13.84□□□□□ -0.19
PRP38Q00723 DEP1YAL013W 1218 nt13.77□□□□□ -0.21
PRP38Q00723 YDJ1YNL064C 1230 nt13.76□□□□□ -0.21
PRP38Q00723 SSA3YBL075C 1950 nt13.76□□□□□ -0.21
PRP38Q00723 RRN5YLR141W 1092 nt13.74□□□□□ -0.21
PRP38Q00723 ARE1YCR048W 1833 nt13.71□□□□□ -0.22
PRP38Q00723 OPI9YLR338W 858 nt13.69□□□□□ -0.22
PRP38Q00723 SAH1YER043C 1350 nt13.69□□□□□ -0.22
PRP38Q00723 POA1YBR022W 534 nt13.6□□□□□ -0.23
PRP38Q00723 RPN10YHR200W 807 nt13.58□□□□□ -0.24
PRP38Q00723 YHR049C-AYHR049C-A 297 nt13.56□□□□□ -0.24
PRP38Q00723 GAR1YHR089C 618 nt13.52□□□□□ -0.25
PRP38Q00723 YNL208WYNL208W 600 nt13.51□□□□□ -0.25
PRP38Q00723 RSB1YOR049C 1065 nt13.51□□□□□ -0.25
PRP38Q00723 YER088W-BYER088W-B 147 nt13.46□□□□□ -0.25
PRP38Q00723 BSC6YOL137W 1494 nt13.36□□□□□ -0.27
PRP38Q00723 PUN1YLR414C 792 nt13.3□□□□□ -0.28
PRP38Q00723 BUD23YCR047C 828 nt13.23□□□□□ -0.29
PRP38Q00723 PTC2YER089C 1395 nt13.2□□□□□ -0.3
PRP38Q00723 PST2YDR032C 597 nt13.19□□□□□ -0.3
PRP38Q00723 YJR018WYJR018W 363 nt13.18□□□□□ -0.3
PRP38Q00723 TIR1YER011W 765 nt13.07□□□□□ -0.32
PRP38Q00723 NAB2YGL122C 1578 nt13.05□□□□□ -0.32
PRP38Q00723 SSA1YAL005C 1929 nt12.97□□□□□ -0.33
PRP38Q00723 YJR120WYJR120W 351 nt12.91□□□□□ -0.34
PRP38Q00723 SPT5YML010W 3192 nt12.89□□□□□ -0.35
PRP38Q00723 RPP2BYDR382W 333 nt12.86□□□□□ -0.35
PRP38Q00723 FIS1YIL065C 468 nt12.84□□□□□ -0.35
PRP38Q00723 DAL1YIR027C 1383 nt12.83□□□□□ -0.36
PRP38Q00723 FPR4YLR449W 1179 nt12.82□□□□□ -0.36
PRP38Q00723 YKL097CYKL097C 411 nt12.77□□□□□ -0.37
PRP38Q00723 INM2YDR287W 879 nt12.75□□□□□ -0.37
PRP38Q00723 PHO4YFR034C 939 nt12.72□□□□□ -0.37
PRP38Q00723 SRB2YHR041C 633 nt12.69□□□□□ -0.38
PRP38Q00723 SHU1YHL006C 453 nt12.61□□□□□ -0.39
PRP38Q00723 YBL100CYBL100C 315 nt12.6□□□□□ -0.39
PRP38Q00723 SSA4YER103W 1929 nt12.58□□□□□ -0.39
PRP38Q00723 MEP2YNL142W 1500 nt12.56□□□□□ -0.4
PRP38Q00723 YPS1YLR120C 1710 nt12.55□□□□□ -0.4
PRP38Q00723 BDH2YAL061W 1254 nt12.54□□□□□ -0.4
PRP38Q00723 YHR165W-AYHR165W-A 312 nt12.46□□□□□ -0.41
PRP38Q00723 WWM1YFL010C 636 nt12.45□□□□□ -0.42
PRP38Q00723 FUN26YAL022C 1554 nt12.43□□□□□ -0.42
PRP38Q00723 YDR095CYDR095C 411 nt12.43□□□□□ -0.42
PRP38Q00723 DCW1YKL046C 1350 nt12.36□□□□□ -0.43
PRP38Q00723 TRM9YML014W 840 nt12.36□□□□□ -0.43
PRP38Q00723 YAL037C-BYAL037C-B 975 nt12.35□□□□□ -0.43
PRP38Q00723 LSM3YLR438C-A 270 nt12.33□□□□□ -0.44
PRP38Q00723 ALF1YNL148C 765 nt12.33□□□□□ -0.44
PRP38Q00723 YGR021WYGR021W 873 nt12.32□□□□□ -0.44
PRP38Q00723 YFL021C-AYFL021C-A 855 nt12.25□□□□□ -0.45
PRP38Q00723 CCT6YDR188W 1641 nt12.24□□□□□ -0.45
PRP38Q00723 HOM6YJR139C 1080 nt12.23□□□□□ -0.45
PRP38Q00723 RPP2AYOL039W 321 nt12.2□□□□□ -0.46
PRP38Q00723 EMI2YDR516C 1503 nt12.2□□□□□ -0.46
PRP38Q00723 PTP1YDL230W 1008 nt12.17□□□□□ -0.46
PRP38Q00723 SUF2tP(AGG)C 72 nt12.17□□□□□ -0.46
PRP38Q00723 SUF10tP(AGG)N 72 nt12.17□□□□□ -0.46
PRP38Q00723 YOR139CYOR139C 393 nt12.16□□□□□ -0.46
PRP38Q00723 MNP1YGL068W 585 nt12.14□□□□□ -0.47
PRP38Q00723 YMR090WYMR090W 684 nt12.14□□□□□ -0.47
PRP38Q00723 NPL3YDR432W 1245 nt12.13□□□□□ -0.47
PRP38Q00723 CAC2YML102W 1407 nt12.12□□□□□ -0.47
PRP38Q00723 SIS1YNL007C 1059 nt12.12□□□□□ -0.47
PRP38Q00723 YDL221WYDL221W 552 nt12.1□□□□□ -0.47
PRP38Q00723 BDF1YLR399C 2061 nt12.1□□□□□ -0.47
Retrieved 100 of 7,029 protein–RNA pairs in 155.3 ms