Protein–RNA interactions for Protein: P34162

SRB2, Mediator of RNA polymerase II transcription subunit 20, yeastyeast

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRB2P34162 YML009W-BYML009W-B 477 nt21.43■■□□□ 1.02
SRB2P34162 NSR1YGR159C 1245 nt21.29■■□□□ 1
SRB2P34162 NOP1YDL014W 984 nt20.81■□□□□ 0.92
SRB2P34162 YKL036CYKL036C 393 nt19.22■□□□□ 0.67
SRB2P34162 MDJ1YFL016C 1536 nt18.92■□□□□ 0.62
SRB2P34162 Q0297Q0297 156 nt18.24■□□□□ 0.51
SRB2P34162 SRX1YKL086W 384 nt18.2■□□□□ 0.5
SRB2P34162 YJL027CYJL027C 417 nt17.94■□□□□ 0.46
SRB2P34162 SCS3YGL126W 1143 nt17.49■□□□□ 0.39
SRB2P34162 YCR051WYCR051W 669 nt17.27■□□□□ 0.36
SRB2P34162 DBP2YNL112W 1641 nt16.75■□□□□ 0.27
SRB2P34162 YOL085CYOL085C 342 nt16.65■□□□□ 0.26
SRB2P34162 TRN1tP(UGG)A 72 nt16.47■□□□□ 0.23
SRB2P34162 SUF9tP(UGG)F 72 nt16.47■□□□□ 0.23
SRB2P34162 SUF8tP(UGG)H 72 nt16.47■□□□□ 0.23
SRB2P34162 tP(UGG)LtP(UGG)L 72 nt16.47■□□□□ 0.23
SRB2P34162 SUF7tP(UGG)M 72 nt16.47■□□□□ 0.23
SRB2P34162 tP(UGG)N1tP(UGG)N1 72 nt16.47■□□□□ 0.23
SRB2P34162 tP(UGG)N2tP(UGG)N2 72 nt16.47■□□□□ 0.23
SRB2P34162 tP(UGG)O1tP(UGG)O1 72 nt16.47■□□□□ 0.23
SRB2P34162 SUF11tP(UGG)O2 72 nt16.47■□□□□ 0.23
SRB2P34162 PKP1YIL042C 1185 nt16.4■□□□□ 0.22
SRB2P34162 RPP1BYDL130W 321 nt16.36■□□□□ 0.21
SRB2P34162 CCC1YLR220W 969 nt16.29■□□□□ 0.2
SRB2P34162 YBR190WYBR190W 312 nt16.12■□□□□ 0.17
SRB2P34162 RTC3YHR087W 336 nt15.76■□□□□ 0.11
SRB2P34162 RVS167YDR388W 1449 nt15.72■□□□□ 0.11
SRB2P34162 SCJ1YMR214W 1134 nt15.67■□□□□ 0.1
SRB2P34162 PET122YER153C 765 nt15.65■□□□□ 0.1
SRB2P34162 ATS1YAL020C 1002 nt15.64■□□□□ 0.09
SRB2P34162 tP(UGG)O3tP(UGG)O3 72 nt15.58■□□□□ 0.08
SRB2P34162 SCR1SCR1 522 nt15.45■□□□□ 0.06
SRB2P34162 RRN5YLR141W 1092 nt15.19■□□□□ 0.02
SRB2P34162 SHR5YOL110W 714 nt15.18■□□□□ 0.02
SRB2P34162 YDJ1YNL064C 1230 nt15.07■□□□□ 0
SRB2P34162 YER088W-BYER088W-B 147 nt14.89□□□□□ -0.03
SRB2P34162 RSB1YOR049C 1065 nt14.87□□□□□ -0.03
SRB2P34162 URN1YPR152C 1398 nt14.76□□□□□ -0.05
SRB2P34162 DEP1YAL013W 1218 nt14.76□□□□□ -0.05
SRB2P34162 GAR1YHR089C 618 nt14.73□□□□□ -0.05
SRB2P34162 PUT4YOR348C 1884 nt14.65□□□□□ -0.06
SRB2P34162 OPI9YLR338W 858 nt14.55□□□□□ -0.08
SRB2P34162 RPN10YHR200W 807 nt14.53□□□□□ -0.08
SRB2P34162 YNL208WYNL208W 600 nt14.52□□□□□ -0.09
SRB2P34162 PST2YDR032C 597 nt14.49□□□□□ -0.09
SRB2P34162 SAH1YER043C 1350 nt14.46□□□□□ -0.1
SRB2P34162 ARE1YCR048W 1833 nt14.38□□□□□ -0.11
SRB2P34162 SSA3YBL075C 1950 nt14.26□□□□□ -0.13
SRB2P34162 TIR1YER011W 765 nt14.24□□□□□ -0.13
SRB2P34162 YHR049C-AYHR049C-A 297 nt14.2□□□□□ -0.14
SRB2P34162 POA1YBR022W 534 nt14.19□□□□□ -0.14
SRB2P34162 PUN1YLR414C 792 nt14.12□□□□□ -0.15
SRB2P34162 YJR018WYJR018W 363 nt14.08□□□□□ -0.16
SRB2P34162 SSA1YAL005C 1929 nt14.07□□□□□ -0.16
SRB2P34162 PTC2YER089C 1395 nt13.95□□□□□ -0.18
SRB2P34162 SHU1YHL006C 453 nt13.91□□□□□ -0.18
SRB2P34162 YKL097CYKL097C 411 nt13.91□□□□□ -0.18
SRB2P34162 YJR120WYJR120W 351 nt13.89□□□□□ -0.19
SRB2P34162 BSC6YOL137W 1494 nt13.88□□□□□ -0.19
SRB2P34162 BUD23YCR047C 828 nt13.87□□□□□ -0.19
SRB2P34162 SRB2YHR041C 633 nt13.86□□□□□ -0.19
SRB2P34162 RPP2BYDR382W 333 nt13.79□□□□□ -0.2
SRB2P34162 NAB2YGL122C 1578 nt13.76□□□□□ -0.21
SRB2P34162 YAL037C-BYAL037C-B 975 nt13.69□□□□□ -0.22
SRB2P34162 WWM1YFL010C 636 nt13.62□□□□□ -0.23
SRB2P34162 DAL1YIR027C 1383 nt13.59□□□□□ -0.23
SRB2P34162 FIS1YIL065C 468 nt13.59□□□□□ -0.23
SRB2P34162 INM2YDR287W 879 nt13.57□□□□□ -0.24
SRB2P34162 FPR4YLR449W 1179 nt13.56□□□□□ -0.24
SRB2P34162 BDH2YAL061W 1254 nt13.53□□□□□ -0.24
SRB2P34162 YGR021WYGR021W 873 nt13.52□□□□□ -0.25
SRB2P34162 HOM6YJR139C 1080 nt13.49□□□□□ -0.25
SRB2P34162 PHO4YFR034C 939 nt13.47□□□□□ -0.25
SRB2P34162 YBL100CYBL100C 315 nt13.45□□□□□ -0.26
SRB2P34162 MNP1YGL068W 585 nt13.43□□□□□ -0.26
SRB2P34162 YFL021C-AYFL021C-A 855 nt13.39□□□□□ -0.27
SRB2P34162 YOR139CYOR139C 393 nt13.37□□□□□ -0.27
SRB2P34162 LSM3YLR438C-A 270 nt13.34□□□□□ -0.27
SRB2P34162 FUN26YAL022C 1554 nt13.29□□□□□ -0.28
SRB2P34162 RKM5YLR137W 1104 nt13.29□□□□□ -0.28
SRB2P34162 TRM9YML014W 840 nt13.26□□□□□ -0.29
SRB2P34162 NPL3YDR432W 1245 nt13.24□□□□□ -0.29
SRB2P34162 SPT5YML010W 3192 nt13.21□□□□□ -0.3
SRB2P34162 YOL037CYOL037C 354 nt13.2□□□□□ -0.3
SRB2P34162 YPS1YLR120C 1710 nt13.19□□□□□ -0.3
SRB2P34162 CCT6YDR188W 1641 nt13.13□□□□□ -0.31
SRB2P34162 YDR095CYDR095C 411 nt13.13□□□□□ -0.31
SRB2P34162 ALF1YNL148C 765 nt13.09□□□□□ -0.31
SRB2P34162 YHR165W-AYHR165W-A 312 nt13.05□□□□□ -0.32
SRB2P34162 MEP2YNL142W 1500 nt13.03□□□□□ -0.32
SRB2P34162 SUF2tP(AGG)C 72 nt13.01□□□□□ -0.33
SRB2P34162 SUF10tP(AGG)N 72 nt13.01□□□□□ -0.33
SRB2P34162 SIS1YNL007C 1059 nt12.91□□□□□ -0.34
SRB2P34162 YLR281CYLR281C 468 nt12.89□□□□□ -0.35
SRB2P34162 RPP2AYOL039W 321 nt12.87□□□□□ -0.35
SRB2P34162 WHI5YOR083W 888 nt12.86□□□□□ -0.35
SRB2P34162 tM(CAU)CtM(CAU)C 72 nt12.85□□□□□ -0.35
SRB2P34162 IMT4tM(CAU)E 72 nt12.85□□□□□ -0.35
SRB2P34162 IMT3tM(CAU)J3 72 nt12.85□□□□□ -0.35
SRB2P34162 IMT1tM(CAU)O1 72 nt12.85□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms