Protein–RNA interactions for Protein: P0CX53

RPL12A, 60S ribosomal protein L12-A, yeastyeast

Known RBP Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL12AP0CX53 NSR1YGR159C 1245 nt15.47■□□□□ 0.07
RPL12AP0CX53 YML009W-BYML009W-B 477 nt15.22■□□□□ 0.03
RPL12AP0CX53 NOP1YDL014W 984 nt14.72□□□□□ -0.05
RPL12AP0CX53 MDJ1YFL016C 1536 nt14.01□□□□□ -0.17
RPL12AP0CX53 YKL036CYKL036C 393 nt13.18□□□□□ -0.3
RPL12AP0CX53 YJL027CYJL027C 417 nt12.98□□□□□ -0.33
RPL12AP0CX53 SRX1YKL086W 384 nt12.79□□□□□ -0.36
RPL12AP0CX53 Q0297Q0297 156 nt12.68□□□□□ -0.38
RPL12AP0CX53 SSA3YBL075C 1950 nt12.19□□□□□ -0.46
RPL12AP0CX53 DBP2YNL112W 1641 nt12.19□□□□□ -0.46
RPL12AP0CX53 YCR051WYCR051W 669 nt12.13□□□□□ -0.47
RPL12AP0CX53 YBR190WYBR190W 312 nt12.1□□□□□ -0.47
RPL12AP0CX53 RTC3YHR087W 336 nt11.86□□□□□ -0.51
RPL12AP0CX53 TRN1tP(UGG)A 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 SUF9tP(UGG)F 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 SUF8tP(UGG)H 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 tP(UGG)LtP(UGG)L 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 SUF7tP(UGG)M 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 tP(UGG)N1tP(UGG)N1 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 tP(UGG)N2tP(UGG)N2 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 tP(UGG)O1tP(UGG)O1 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 SUF11tP(UGG)O2 72 nt11.75□□□□□ -0.53
RPL12AP0CX53 SCS3YGL126W 1143 nt11.73□□□□□ -0.53
RPL12AP0CX53 CCC1YLR220W 969 nt11.68□□□□□ -0.54
RPL12AP0CX53 RVS167YDR388W 1449 nt11.55□□□□□ -0.56
RPL12AP0CX53 RPP1BYDL130W 321 nt11.39□□□□□ -0.59
RPL12AP0CX53 YOL085CYOL085C 342 nt11.39□□□□□ -0.59
RPL12AP0CX53 PKP1YIL042C 1185 nt11.25□□□□□ -0.61
RPL12AP0CX53 SCJ1YMR214W 1134 nt11.25□□□□□ -0.61
RPL12AP0CX53 PUT4YOR348C 1884 nt11.2□□□□□ -0.62
RPL12AP0CX53 Q0182Q0182 405 nt11.19□□□□□ -0.62
RPL12AP0CX53 tP(UGG)O3tP(UGG)O3 72 nt11.02□□□□□ -0.65
RPL12AP0CX53 SHR5YOL110W 714 nt11□□□□□ -0.65
RPL12AP0CX53 URN1YPR152C 1398 nt10.91□□□□□ -0.66
RPL12AP0CX53 PET122YER153C 765 nt10.89□□□□□ -0.67
RPL12AP0CX53 POA1YBR022W 534 nt10.88□□□□□ -0.67
RPL12AP0CX53 ARE1YCR048W 1833 nt10.86□□□□□ -0.67
RPL12AP0CX53 SAH1YER043C 1350 nt10.84□□□□□ -0.67
RPL12AP0CX53 OPI9YLR338W 858 nt10.82□□□□□ -0.68
RPL12AP0CX53 DEP1YAL013W 1218 nt10.79□□□□□ -0.68
RPL12AP0CX53 YHR049C-AYHR049C-A 297 nt10.78□□□□□ -0.68
RPL12AP0CX53 SCR1SCR1 522 nt10.77□□□□□ -0.69
RPL12AP0CX53 RPN10YHR200W 807 nt10.74□□□□□ -0.69
RPL12AP0CX53 BSC6YOL137W 1494 nt10.71□□□□□ -0.69
RPL12AP0CX53 SSA4YER103W 1929 nt10.68□□□□□ -0.7
RPL12AP0CX53 YDJ1YNL064C 1230 nt10.68□□□□□ -0.7
RPL12AP0CX53 YNL208WYNL208W 600 nt10.63□□□□□ -0.71
RPL12AP0CX53 SPT5YML010W 3192 nt10.63□□□□□ -0.71
RPL12AP0CX53 MOT3YMR070W 1473 nt10.6□□□□□ -0.71
RPL12AP0CX53 RRN5YLR141W 1092 nt10.57□□□□□ -0.72
RPL12AP0CX53 BUD23YCR047C 828 nt10.55□□□□□ -0.72
RPL12AP0CX53 PUN1YLR414C 792 nt10.55□□□□□ -0.72
RPL12AP0CX53 GAR1YHR089C 618 nt10.5□□□□□ -0.73
RPL12AP0CX53 PTC2YER089C 1395 nt10.45□□□□□ -0.74
RPL12AP0CX53 ATS1YAL020C 1002 nt10.41□□□□□ -0.74
RPL12AP0CX53 YJR018WYJR018W 363 nt10.4□□□□□ -0.74
RPL12AP0CX53 NAB2YGL122C 1578 nt10.39□□□□□ -0.75
RPL12AP0CX53 YER088W-BYER088W-B 147 nt10.34□□□□□ -0.75
RPL12AP0CX53 BDF1YLR399C 2061 nt10.31□□□□□ -0.76
RPL12AP0CX53 RSB1YOR049C 1065 nt10.27□□□□□ -0.77
RPL12AP0CX53 PAC11YDR488C 1602 nt10.21□□□□□ -0.78
RPL12AP0CX53 FPR4YLR449W 1179 nt10.18□□□□□ -0.78
RPL12AP0CX53 TAT1YBR069C 1860 nt10.17□□□□□ -0.78
RPL12AP0CX53 DAL1YIR027C 1383 nt10.16□□□□□ -0.78
RPL12AP0CX53 RPP2BYDR382W 333 nt10.16□□□□□ -0.78
RPL12AP0CX53 TIR1YER011W 765 nt10.16□□□□□ -0.78
RPL12AP0CX53 INM2YDR287W 879 nt10.12□□□□□ -0.79
RPL12AP0CX53 FIS1YIL065C 468 nt10.11□□□□□ -0.79
RPL12AP0CX53 MEP2YNL142W 1500 nt10.1□□□□□ -0.79
RPL12AP0CX53 NVJ2YPR091C 2313 nt10.06□□□□□ -0.8
RPL12AP0CX53 SSA1YAL005C 1929 nt10.05□□□□□ -0.8
RPL12AP0CX53 PHO4YFR034C 939 nt10.05□□□□□ -0.8
RPL12AP0CX53 YJR120WYJR120W 351 nt10.03□□□□□ -0.8
RPL12AP0CX53 FPS1YLL043W 2010 nt10□□□□□ -0.81
RPL12AP0CX53 YPS1YLR120C 1710 nt9.96□□□□□ -0.81
RPL12AP0CX53 YHR165W-AYHR165W-A 312 nt9.95□□□□□ -0.82
RPL12AP0CX53 YBL100CYBL100C 315 nt9.93□□□□□ -0.82
RPL12AP0CX53 DCW1YKL046C 1350 nt9.91□□□□□ -0.82
RPL12AP0CX53 YDR095CYDR095C 411 nt9.85□□□□□ -0.83
RPL12AP0CX53 YMR090WYMR090W 684 nt9.85□□□□□ -0.83
RPL12AP0CX53 BDH2YAL061W 1254 nt9.82□□□□□ -0.84
RPL12AP0CX53 YBR220CYBR220C 1683 nt9.81□□□□□ -0.84
RPL12AP0CX53 ALF1YNL148C 765 nt9.8□□□□□ -0.84
RPL12AP0CX53 EMI2YDR516C 1503 nt9.79□□□□□ -0.84
RPL12AP0CX53 FUN26YAL022C 1554 nt9.78□□□□□ -0.84
RPL12AP0CX53 TRM9YML014W 840 nt9.75□□□□□ -0.85
RPL12AP0CX53 YJL225CYJL225C 5277 nt9.74□□□□□ -0.85
RPL12AP0CX53 SRB2YHR041C 633 nt9.73□□□□□ -0.85
RPL12AP0CX53 RPP2AYOL039W 321 nt9.7□□□□□ -0.86
RPL12AP0CX53 RDN37-1RDN37-1 5354 nt9.69□□□□□ -0.86
RPL12AP0CX53 RDN37-2RDN37-2 5354 nt9.69□□□□□ -0.86
RPL12AP0CX53 PST2YDR032C 597 nt9.68□□□□□ -0.86
RPL12AP0CX53 YDL221WYDL221W 552 nt9.67□□□□□ -0.86
RPL12AP0CX53 LSM3YLR438C-A 270 nt9.66□□□□□ -0.86
RPL12AP0CX53 PCH2YBR186W 1695 nt9.66□□□□□ -0.86
RPL12AP0CX53 SDH1YKL148C 1923 nt9.65□□□□□ -0.86
RPL12AP0CX53 SUF2tP(AGG)C 72 nt9.64□□□□□ -0.87
RPL12AP0CX53 SUF10tP(AGG)N 72 nt9.64□□□□□ -0.87
RPL12AP0CX53 SEC11YIR022W 504 nt9.64□□□□□ -0.87
RPL12AP0CX53 GUT2YIL155C 1950 nt9.62□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 8.6 ms