Protein–RNA interactions for Protein: Q03049

YDR541C, Putative uncharacterized oxidoreductase YDR541C, yeastyeast

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDR541CQ03049 YML009W-BYML009W-B 477 nt18.75■□□□□ 0.59
YDR541CQ03049 NSR1YGR159C 1245 nt18.73■□□□□ 0.59
YDR541CQ03049 NOP1YDL014W 984 nt18.12■□□□□ 0.49
YDR541CQ03049 MDJ1YFL016C 1536 nt16.8■□□□□ 0.28
YDR541CQ03049 YKL036CYKL036C 393 nt16.63■□□□□ 0.25
YDR541CQ03049 SRX1YKL086W 384 nt15.87■□□□□ 0.13
YDR541CQ03049 Q0297Q0297 156 nt15.86■□□□□ 0.13
YDR541CQ03049 YJL027CYJL027C 417 nt15.55■□□□□ 0.08
YDR541CQ03049 SCS3YGL126W 1143 nt15.23■□□□□ 0.03
YDR541CQ03049 YCR051WYCR051W 669 nt15.05■□□□□ -0
YDR541CQ03049 DBP2YNL112W 1641 nt14.84□□□□□ -0.03
YDR541CQ03049 TRN1tP(UGG)A 72 nt14.44□□□□□ -0.1
YDR541CQ03049 SUF9tP(UGG)F 72 nt14.44□□□□□ -0.1
YDR541CQ03049 SUF8tP(UGG)H 72 nt14.44□□□□□ -0.1
YDR541CQ03049 tP(UGG)LtP(UGG)L 72 nt14.44□□□□□ -0.1
YDR541CQ03049 SUF7tP(UGG)M 72 nt14.44□□□□□ -0.1
YDR541CQ03049 tP(UGG)N1tP(UGG)N1 72 nt14.44□□□□□ -0.1
YDR541CQ03049 tP(UGG)N2tP(UGG)N2 72 nt14.44□□□□□ -0.1
YDR541CQ03049 tP(UGG)O1tP(UGG)O1 72 nt14.44□□□□□ -0.1
YDR541CQ03049 SUF11tP(UGG)O2 72 nt14.44□□□□□ -0.1
YDR541CQ03049 YOL085CYOL085C 342 nt14.44□□□□□ -0.1
YDR541CQ03049 YBR190WYBR190W 312 nt14.33□□□□□ -0.12
YDR541CQ03049 CCC1YLR220W 969 nt14.31□□□□□ -0.12
YDR541CQ03049 PKP1YIL042C 1185 nt14.26□□□□□ -0.13
YDR541CQ03049 RPP1BYDL130W 321 nt14.23□□□□□ -0.13
YDR541CQ03049 SCJ1YMR214W 1134 nt14.09□□□□□ -0.15
YDR541CQ03049 SSA3YBL075C 1950 nt14.06□□□□□ -0.16
YDR541CQ03049 RTC3YHR087W 336 nt13.99□□□□□ -0.17
YDR541CQ03049 RVS167YDR388W 1449 nt13.81□□□□□ -0.2
YDR541CQ03049 ATS1YAL020C 1002 nt13.74□□□□□ -0.21
YDR541CQ03049 PET122YER153C 765 nt13.64□□□□□ -0.23
YDR541CQ03049 tP(UGG)O3tP(UGG)O3 72 nt13.62□□□□□ -0.23
YDR541CQ03049 SCR1SCR1 522 nt13.39□□□□□ -0.27
YDR541CQ03049 SHR5YOL110W 714 nt13.34□□□□□ -0.27
YDR541CQ03049 RRN5YLR141W 1092 nt13.23□□□□□ -0.29
YDR541CQ03049 YDJ1YNL064C 1230 nt13.16□□□□□ -0.3
YDR541CQ03049 PUT4YOR348C 1884 nt13.15□□□□□ -0.3
YDR541CQ03049 URN1YPR152C 1398 nt13.07□□□□□ -0.32
YDR541CQ03049 DEP1YAL013W 1218 nt13.06□□□□□ -0.32
YDR541CQ03049 YER088W-BYER088W-B 147 nt12.97□□□□□ -0.33
YDR541CQ03049 GAR1YHR089C 618 nt12.91□□□□□ -0.34
YDR541CQ03049 OPI9YLR338W 858 nt12.91□□□□□ -0.34
YDR541CQ03049 RSB1YOR049C 1065 nt12.89□□□□□ -0.35
YDR541CQ03049 SAH1YER043C 1350 nt12.88□□□□□ -0.35
YDR541CQ03049 ARE1YCR048W 1833 nt12.88□□□□□ -0.35
YDR541CQ03049 RPN10YHR200W 807 nt12.78□□□□□ -0.36
YDR541CQ03049 YNL208WYNL208W 600 nt12.78□□□□□ -0.36
YDR541CQ03049 POA1YBR022W 534 nt12.72□□□□□ -0.37
YDR541CQ03049 YHR049C-AYHR049C-A 297 nt12.69□□□□□ -0.38
YDR541CQ03049 PST2YDR032C 597 nt12.65□□□□□ -0.38
YDR541CQ03049 PUN1YLR414C 792 nt12.5□□□□□ -0.41
YDR541CQ03049 TIR1YER011W 765 nt12.48□□□□□ -0.41
YDR541CQ03049 BSC6YOL137W 1494 nt12.47□□□□□ -0.41
YDR541CQ03049 YJR018WYJR018W 363 nt12.46□□□□□ -0.41
YDR541CQ03049 YKL097CYKL097C 411 nt12.41□□□□□ -0.42
YDR541CQ03049 PTC2YER089C 1395 nt12.41□□□□□ -0.42
YDR541CQ03049 SSA1YAL005C 1929 nt12.39□□□□□ -0.43
YDR541CQ03049 BUD23YCR047C 828 nt12.38□□□□□ -0.43
YDR541CQ03049 YJR120WYJR120W 351 nt12.3□□□□□ -0.44
YDR541CQ03049 NAB2YGL122C 1578 nt12.24□□□□□ -0.45
YDR541CQ03049 SRB2YHR041C 633 nt12.21□□□□□ -0.45
YDR541CQ03049 RPP2BYDR382W 333 nt12.13□□□□□ -0.47
YDR541CQ03049 SSA4YER103W 1929 nt12.12□□□□□ -0.47
YDR541CQ03049 FIS1YIL065C 468 nt12.09□□□□□ -0.47
YDR541CQ03049 DAL1YIR027C 1383 nt12.06□□□□□ -0.48
YDR541CQ03049 SPT5YML010W 3192 nt12.04□□□□□ -0.48
YDR541CQ03049 SHU1YHL006C 453 nt12.04□□□□□ -0.48
YDR541CQ03049 FPR4YLR449W 1179 nt12.03□□□□□ -0.48
YDR541CQ03049 INM2YDR287W 879 nt12□□□□□ -0.49
YDR541CQ03049 PHO4YFR034C 939 nt11.96□□□□□ -0.49
YDR541CQ03049 WWM1YFL010C 636 nt11.94□□□□□ -0.5
YDR541CQ03049 YAL037C-BYAL037C-B 975 nt11.91□□□□□ -0.5
YDR541CQ03049 BDH2YAL061W 1254 nt11.9□□□□□ -0.5
YDR541CQ03049 YBL100CYBL100C 315 nt11.89□□□□□ -0.51
YDR541CQ03049 PAC11YDR488C 1602 nt11.82□□□□□ -0.52
YDR541CQ03049 BDF1YLR399C 2061 nt11.78□□□□□ -0.52
YDR541CQ03049 YPS1YLR120C 1710 nt11.77□□□□□ -0.52
YDR541CQ03049 YGR021WYGR021W 873 nt11.76□□□□□ -0.53
YDR541CQ03049 HOM6YJR139C 1080 nt11.76□□□□□ -0.53
YDR541CQ03049 FUN26YAL022C 1554 nt11.75□□□□□ -0.53
YDR541CQ03049 YOR139CYOR139C 393 nt11.74□□□□□ -0.53
YDR541CQ03049 MEP2YNL142W 1500 nt11.71□□□□□ -0.53
YDR541CQ03049 MNP1YGL068W 585 nt11.71□□□□□ -0.53
YDR541CQ03049 Q0182Q0182 405 nt11.71□□□□□ -0.53
YDR541CQ03049 YFL021C-AYFL021C-A 855 nt11.7□□□□□ -0.54
YDR541CQ03049 LSM3YLR438C-A 270 nt11.7□□□□□ -0.54
YDR541CQ03049 TRM9YML014W 840 nt11.69□□□□□ -0.54
YDR541CQ03049 YDR095CYDR095C 411 nt11.68□□□□□ -0.54
YDR541CQ03049 NPL3YDR432W 1245 nt11.67□□□□□ -0.54
YDR541CQ03049 YHR165W-AYHR165W-A 312 nt11.63□□□□□ -0.55
YDR541CQ03049 NVJ2YPR091C 2313 nt11.6□□□□□ -0.55
YDR541CQ03049 CCT6YDR188W 1641 nt11.59□□□□□ -0.55
YDR541CQ03049 TAT1YBR069C 1860 nt11.59□□□□□ -0.55
YDR541CQ03049 RKM5YLR137W 1104 nt11.58□□□□□ -0.56
YDR541CQ03049 ALF1YNL148C 765 nt11.58□□□□□ -0.56
YDR541CQ03049 DCW1YKL046C 1350 nt11.56□□□□□ -0.56
YDR541CQ03049 PTP1YDL230W 1008 nt11.47□□□□□ -0.57
YDR541CQ03049 RPP2AYOL039W 321 nt11.46□□□□□ -0.57
YDR541CQ03049 SUF2tP(AGG)C 72 nt11.45□□□□□ -0.58
YDR541CQ03049 SUF10tP(AGG)N 72 nt11.45□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms