RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIZ1	YDR409W	TAH1	P25638	111 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	YIM1	P28625	365 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	COX13	P32799	129 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	PTR2	P32901	601 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	LST4	P34239	828 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	CBT1	P36038	271 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	MRP21	P38175	177 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	RTC3	P38804	111 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	CTF8	P38877	133 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	SPO73	P40031	143 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	YER085C	P40058	173 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	COG3	P40094	801 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	VRG4	P40107	337 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	AIR1	P40507	360 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	IST3	P40565	148 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	HXT9	P40885	567 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	FKH2	P41813	862 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	SSU1	P41930	458 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	UBC12	P52491	188 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	NBP35	P52920	328 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	BOL2	P53082	120 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	IPI3	P53877	555 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	IGO1	P53897	168 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	RLI1	Q03195	608 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	EMI1	Q04406	187 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	YLR283W	Q05867	314 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	SNT309	Q06091	175 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	CRN1	Q06440	651 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	MCA1	Q08601	432 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	YOR352W	Q08816	343 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	RDR1	Q08904	546 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	PUS9	Q12069	462 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	NBP2	Q12163	236 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	MDM32	Q12171	622 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	ERP3	Q12403	225 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	AHC1	Q12433	566 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	AHA1	Q12449	350 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	TIM9	O74700	87 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	ADE4	P04046	510 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	HEM2	P05373	342 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	RPS16A	P0CX51	143 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	RPS16B	P0CX52	143 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	RPL35A	P0CX84	120 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	RPL35B	P0CX85	120 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	CDC5	P32562	705 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	RPS1A	P33442	255 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	SKT5	P34226	696 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	MRPL4	P36517	319 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	AGP2	P38090	596 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	PTC2	P39966	464 aa	Known RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	RGI1	P40043	161 aa	Predicted RBP	3.12	□□□□□ -1.91
SIZ1	YDR409W	MPM1	P40364	252 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	IME4	P41833	600 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	BUD9	P53226	547 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	YGR067C	P53243	804 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
SIZ1	YDR409W	SCS7	Q03529	384 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	ASR1	Q06834	288 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	THP1	Q08231	455 aa		3.12	□□□□□ -1.91
SIZ1	YDR409W	GAL80	P04387	435 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	HIP1	P06775	603 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	GAL7	P08431	366 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	BAR1	P12630	587 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	TKL1	P23254	680 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	BEM1	P29366	551 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	UTR4	P32626	227 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	SDH3	P33421	198 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	JEN1	P36035	616 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	MRPL3	P36516	390 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	MRPL7	P36519	292 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	APD1	P38281	316 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	ZRG8	P40021	1076 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	YIR016W	P40572	265 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	GAB1	P41733	394 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	SHR5	P41912	237 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	PFA3	P42836	336 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	LSM1	P47017	172 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	EFM5	P53200	248 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	NQM1	P53228	333 aa	Predicted RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	FMP48	P53233	369 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	CAF40	P53829	373 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	YNL092W	P53934	400 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	AQR1	P53943	586 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	SAM50	P53969	484 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	EGD1	Q02642	157 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	YMR178W	Q03219	274 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	YMD8	Q03697	442 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	ECM11	Q04110	302 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	YHC1	Q05900	231 aa	Known RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	RIF2	Q06208	395 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	CDD1	Q06549	142 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	SYC1	Q08553	188 aa	Predicted RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	GRE1	Q08969	168 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	FEX2	Q08991	375 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	YOR289W	Q12012	251 aa	Predicted RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	MRH1	Q12117	320 aa	Predicted RBP	3.11	□□□□□ -1.91
SIZ1	YDR409W	LAG2	Q92325	660 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	DFG16	Q99234	619 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	UBR1	P19812	1950 aa		3.11	□□□□□ -1.91
SIZ1	YDR409W	CYC1	P00044	109 aa	Predicted RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms