Protein–RNA interactions for Protein: P53877

IPI3, Pre-rRNA-processing protein IPI3, yeastyeast

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IPI3P53877 YML009W-BYML009W-B 477 nt20.74■□□□□ 0.91
IPI3P53877 NSR1YGR159C 1245 nt20.45■□□□□ 0.86
IPI3P53877 NOP1YDL014W 984 nt20.16■□□□□ 0.82
IPI3P53877 YKL036CYKL036C 393 nt18.68■□□□□ 0.58
IPI3P53877 MDJ1YFL016C 1536 nt18.13■□□□□ 0.49
IPI3P53877 Q0297Q0297 156 nt17.63■□□□□ 0.41
IPI3P53877 SRX1YKL086W 384 nt17.59■□□□□ 0.41
IPI3P53877 YJL027CYJL027C 417 nt17.5■□□□□ 0.39
IPI3P53877 SCS3YGL126W 1143 nt17.04■□□□□ 0.32
IPI3P53877 YCR051WYCR051W 669 nt16.79■□□□□ 0.28
IPI3P53877 YOL085CYOL085C 342 nt16.19■□□□□ 0.18
IPI3P53877 DBP2YNL112W 1641 nt16.01■□□□□ 0.15
IPI3P53877 PKP1YIL042C 1185 nt16■□□□□ 0.15
IPI3P53877 RPP1BYDL130W 321 nt15.85■□□□□ 0.13
IPI3P53877 TRN1tP(UGG)A 72 nt15.83■□□□□ 0.12
IPI3P53877 SUF9tP(UGG)F 72 nt15.83■□□□□ 0.12
IPI3P53877 SUF8tP(UGG)H 72 nt15.83■□□□□ 0.12
IPI3P53877 tP(UGG)LtP(UGG)L 72 nt15.83■□□□□ 0.12
IPI3P53877 SUF7tP(UGG)M 72 nt15.83■□□□□ 0.12
IPI3P53877 tP(UGG)N1tP(UGG)N1 72 nt15.83■□□□□ 0.12
IPI3P53877 tP(UGG)N2tP(UGG)N2 72 nt15.83■□□□□ 0.12
IPI3P53877 tP(UGG)O1tP(UGG)O1 72 nt15.83■□□□□ 0.12
IPI3P53877 SUF11tP(UGG)O2 72 nt15.83■□□□□ 0.12
IPI3P53877 CCC1YLR220W 969 nt15.8■□□□□ 0.12
IPI3P53877 YBR190WYBR190W 312 nt15.38■□□□□ 0.05
IPI3P53877 ATS1YAL020C 1002 nt15.28■□□□□ 0.04
IPI3P53877 PET122YER153C 765 nt15.15■□□□□ 0.02
IPI3P53877 RTC3YHR087W 336 nt15.15■□□□□ 0.02
IPI3P53877 SCJ1YMR214W 1134 nt15.15■□□□□ 0.02
IPI3P53877 RVS167YDR388W 1449 nt15.13■□□□□ 0.01
IPI3P53877 tP(UGG)O3tP(UGG)O3 72 nt15.05■□□□□ -0
IPI3P53877 SCR1SCR1 522 nt15.03■□□□□ -0
IPI3P53877 RRN5YLR141W 1092 nt14.75□□□□□ -0.05
IPI3P53877 SSA3YBL075C 1950 nt14.63□□□□□ -0.07
IPI3P53877 SHR5YOL110W 714 nt14.6□□□□□ -0.07
IPI3P53877 YDJ1YNL064C 1230 nt14.52□□□□□ -0.09
IPI3P53877 RSB1YOR049C 1065 nt14.5□□□□□ -0.09
IPI3P53877 YER088W-BYER088W-B 147 nt14.44□□□□□ -0.1
IPI3P53877 GAR1YHR089C 618 nt14.27□□□□□ -0.13
IPI3P53877 DEP1YAL013W 1218 nt14.25□□□□□ -0.13
IPI3P53877 URN1YPR152C 1398 nt14.17□□□□□ -0.14
IPI3P53877 PST2YDR032C 597 nt14.11□□□□□ -0.15
IPI3P53877 RPN10YHR200W 807 nt13.96□□□□□ -0.17
IPI3P53877 YNL208WYNL208W 600 nt13.96□□□□□ -0.17
IPI3P53877 OPI9YLR338W 858 nt13.91□□□□□ -0.18
IPI3P53877 PUT4YOR348C 1884 nt13.87□□□□□ -0.19
IPI3P53877 SAH1YER043C 1350 nt13.83□□□□□ -0.19
IPI3P53877 TIR1YER011W 765 nt13.75□□□□□ -0.21
IPI3P53877 ARE1YCR048W 1833 nt13.66□□□□□ -0.22
IPI3P53877 YKL097CYKL097C 411 nt13.64□□□□□ -0.23
IPI3P53877 SSA1YAL005C 1929 nt13.55□□□□□ -0.24
IPI3P53877 SHU1YHL006C 453 nt13.55□□□□□ -0.24
IPI3P53877 YHR049C-AYHR049C-A 297 nt13.53□□□□□ -0.24
IPI3P53877 POA1YBR022W 534 nt13.53□□□□□ -0.24
IPI3P53877 YJR018WYJR018W 363 nt13.52□□□□□ -0.25
IPI3P53877 PUN1YLR414C 792 nt13.51□□□□□ -0.25
IPI3P53877 YAL037C-BYAL037C-B 975 nt13.39□□□□□ -0.27
IPI3P53877 PTC2YER089C 1395 nt13.36□□□□□ -0.27
IPI3P53877 SRB2YHR041C 633 nt13.35□□□□□ -0.27
IPI3P53877 BUD23YCR047C 828 nt13.29□□□□□ -0.28
IPI3P53877 RPP2BYDR382W 333 nt13.28□□□□□ -0.28
IPI3P53877 YJR120WYJR120W 351 nt13.28□□□□□ -0.28
IPI3P53877 BSC6YOL137W 1494 nt13.18□□□□□ -0.3
IPI3P53877 WWM1YFL010C 636 nt13.18□□□□□ -0.3
IPI3P53877 NAB2YGL122C 1578 nt13.14□□□□□ -0.31
IPI3P53877 YGR021WYGR021W 873 nt13.08□□□□□ -0.32
IPI3P53877 FPR4YLR449W 1179 nt13.07□□□□□ -0.32
IPI3P53877 YOR139CYOR139C 393 nt13.05□□□□□ -0.32
IPI3P53877 MNP1YGL068W 585 nt13.04□□□□□ -0.32
IPI3P53877 HOM6YJR139C 1080 nt13.03□□□□□ -0.32
IPI3P53877 INM2YDR287W 879 nt13.01□□□□□ -0.33
IPI3P53877 DAL1YIR027C 1383 nt12.99□□□□□ -0.33
IPI3P53877 BDH2YAL061W 1254 nt12.99□□□□□ -0.33
IPI3P53877 NPL3YDR432W 1245 nt12.97□□□□□ -0.33
IPI3P53877 YFL021C-AYFL021C-A 855 nt12.92□□□□□ -0.34
IPI3P53877 FIS1YIL065C 468 nt12.92□□□□□ -0.34
IPI3P53877 YBL100CYBL100C 315 nt12.91□□□□□ -0.34
IPI3P53877 PHO4YFR034C 939 nt12.86□□□□□ -0.35
IPI3P53877 RKM5YLR137W 1104 nt12.86□□□□□ -0.35
IPI3P53877 LSM3YLR438C-A 270 nt12.83□□□□□ -0.36
IPI3P53877 YOL037CYOL037C 354 nt12.8□□□□□ -0.36
IPI3P53877 TRM9YML014W 840 nt12.78□□□□□ -0.36
IPI3P53877 FUN26YAL022C 1554 nt12.76□□□□□ -0.37
IPI3P53877 ALF1YNL148C 765 nt12.6□□□□□ -0.39
IPI3P53877 CCT6YDR188W 1641 nt12.57□□□□□ -0.4
IPI3P53877 YPS1YLR120C 1710 nt12.55□□□□□ -0.4
IPI3P53877 tM(CAU)CtM(CAU)C 72 nt12.55□□□□□ -0.4
IPI3P53877 IMT4tM(CAU)E 72 nt12.55□□□□□ -0.4
IPI3P53877 IMT3tM(CAU)J3 72 nt12.55□□□□□ -0.4
IPI3P53877 IMT1tM(CAU)O1 72 nt12.55□□□□□ -0.4
IPI3P53877 IMT2tM(CAU)P 72 nt12.55□□□□□ -0.4
IPI3P53877 YLR281CYLR281C 468 nt12.51□□□□□ -0.41
IPI3P53877 WHI5YOR083W 888 nt12.5□□□□□ -0.41
IPI3P53877 YDR095CYDR095C 411 nt12.49□□□□□ -0.41
IPI3P53877 PUS2YGL063W 1113 nt12.49□□□□□ -0.41
IPI3P53877 SUF2tP(AGG)C 72 nt12.49□□□□□ -0.41
IPI3P53877 SUF10tP(AGG)N 72 nt12.49□□□□□ -0.41
IPI3P53877 YHR165W-AYHR165W-A 312 nt12.48□□□□□ -0.41
IPI3P53877 PAC11YDR488C 1602 nt12.45□□□□□ -0.42
IPI3P53877 YLR154C-GYLR154C-G 150 nt12.39□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms