Protein–RNA interactions for Protein: Q08231

THP1, Nuclear mRNA export protein THP1, yeastyeast

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
THP1Q08231 NSR1YGR159C 1245 nt19.21■□□□□ 0.67
THP1Q08231 YML009W-BYML009W-B 477 nt19.04■□□□□ 0.64
THP1Q08231 NOP1YDL014W 984 nt18.38■□□□□ 0.53
THP1Q08231 MDJ1YFL016C 1536 nt17.37■□□□□ 0.37
THP1Q08231 YKL036CYKL036C 393 nt16.64■□□□□ 0.25
THP1Q08231 SRX1YKL086W 384 nt16.04■□□□□ 0.16
THP1Q08231 YJL027CYJL027C 417 nt16.01■□□□□ 0.15
THP1Q08231 Q0297Q0297 156 nt15.95■□□□□ 0.14
THP1Q08231 YCR051WYCR051W 669 nt15.22■□□□□ 0.03
THP1Q08231 DBP2YNL112W 1641 nt15.21■□□□□ 0.03
THP1Q08231 SCS3YGL126W 1143 nt14.95□□□□□ -0.02
THP1Q08231 YBR190WYBR190W 312 nt14.9□□□□□ -0.02
THP1Q08231 TRN1tP(UGG)A 72 nt14.7□□□□□ -0.06
THP1Q08231 SUF9tP(UGG)F 72 nt14.7□□□□□ -0.06
THP1Q08231 SUF8tP(UGG)H 72 nt14.7□□□□□ -0.06
THP1Q08231 tP(UGG)LtP(UGG)L 72 nt14.7□□□□□ -0.06
THP1Q08231 SUF7tP(UGG)M 72 nt14.7□□□□□ -0.06
THP1Q08231 tP(UGG)N1tP(UGG)N1 72 nt14.7□□□□□ -0.06
THP1Q08231 tP(UGG)N2tP(UGG)N2 72 nt14.7□□□□□ -0.06
THP1Q08231 tP(UGG)O1tP(UGG)O1 72 nt14.7□□□□□ -0.06
THP1Q08231 SUF11tP(UGG)O2 72 nt14.7□□□□□ -0.06
THP1Q08231 RTC3YHR087W 336 nt14.58□□□□□ -0.08
THP1Q08231 CCC1YLR220W 969 nt14.58□□□□□ -0.08
THP1Q08231 YOL085CYOL085C 342 nt14.41□□□□□ -0.1
THP1Q08231 RPP1BYDL130W 321 nt14.32□□□□□ -0.12
THP1Q08231 RVS167YDR388W 1449 nt14.27□□□□□ -0.12
THP1Q08231 PKP1YIL042C 1185 nt14.25□□□□□ -0.13
THP1Q08231 SCJ1YMR214W 1134 nt14.08□□□□□ -0.16
THP1Q08231 tP(UGG)O3tP(UGG)O3 72 nt13.8□□□□□ -0.2
THP1Q08231 PUT4YOR348C 1884 nt13.78□□□□□ -0.2
THP1Q08231 PET122YER153C 765 nt13.72□□□□□ -0.21
THP1Q08231 SHR5YOL110W 714 nt13.67□□□□□ -0.22
THP1Q08231 SSA3YBL075C 1950 nt13.65□□□□□ -0.22
THP1Q08231 URN1YPR152C 1398 nt13.51□□□□□ -0.25
THP1Q08231 SCR1SCR1 522 nt13.51□□□□□ -0.25
THP1Q08231 ARE1YCR048W 1833 nt13.43□□□□□ -0.26
THP1Q08231 DEP1YAL013W 1218 nt13.41□□□□□ -0.26
THP1Q08231 SAH1YER043C 1350 nt13.38□□□□□ -0.27
THP1Q08231 OPI9YLR338W 858 nt13.37□□□□□ -0.27
THP1Q08231 YDJ1YNL064C 1230 nt13.35□□□□□ -0.27
THP1Q08231 POA1YBR022W 534 nt13.34□□□□□ -0.27
THP1Q08231 RRN5YLR141W 1092 nt13.3□□□□□ -0.28
THP1Q08231 ATS1YAL020C 1002 nt13.28□□□□□ -0.28
THP1Q08231 YHR049C-AYHR049C-A 297 nt13.27□□□□□ -0.29
THP1Q08231 RPN10YHR200W 807 nt13.24□□□□□ -0.29
THP1Q08231 YNL208WYNL208W 600 nt13.16□□□□□ -0.3
THP1Q08231 GAR1YHR089C 618 nt13.12□□□□□ -0.31
THP1Q08231 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
THP1Q08231 YER088W-BYER088W-B 147 nt13.03□□□□□ -0.32
THP1Q08231 PUN1YLR414C 792 nt12.99□□□□□ -0.33
THP1Q08231 BUD23YCR047C 828 nt12.95□□□□□ -0.34
THP1Q08231 RSB1YOR049C 1065 nt12.94□□□□□ -0.34
THP1Q08231 PTC2YER089C 1395 nt12.89□□□□□ -0.35
THP1Q08231 YJR018WYJR018W 363 nt12.86□□□□□ -0.35
THP1Q08231 NAB2YGL122C 1578 nt12.77□□□□□ -0.37
THP1Q08231 SPT5YML010W 3192 nt12.7□□□□□ -0.38
THP1Q08231 TIR1YER011W 765 nt12.69□□□□□ -0.38
THP1Q08231 SSA1YAL005C 1929 nt12.6□□□□□ -0.39
THP1Q08231 YJR120WYJR120W 351 nt12.55□□□□□ -0.4
THP1Q08231 RPP2BYDR382W 333 nt12.53□□□□□ -0.4
THP1Q08231 FIS1YIL065C 468 nt12.53□□□□□ -0.4
THP1Q08231 DAL1YIR027C 1383 nt12.53□□□□□ -0.4
THP1Q08231 FPR4YLR449W 1179 nt12.52□□□□□ -0.41
THP1Q08231 INM2YDR287W 879 nt12.45□□□□□ -0.42
THP1Q08231 SSA4YER103W 1929 nt12.42□□□□□ -0.42
THP1Q08231 PHO4YFR034C 939 nt12.41□□□□□ -0.42
THP1Q08231 PST2YDR032C 597 nt12.35□□□□□ -0.43
THP1Q08231 MEP2YNL142W 1500 nt12.32□□□□□ -0.44
THP1Q08231 SRB2YHR041C 633 nt12.3□□□□□ -0.44
THP1Q08231 YPS1YLR120C 1710 nt12.28□□□□□ -0.44
THP1Q08231 YBL100CYBL100C 315 nt12.28□□□□□ -0.44
THP1Q08231 BDH2YAL061W 1254 nt12.2□□□□□ -0.46
THP1Q08231 YHR165W-AYHR165W-A 312 nt12.19□□□□□ -0.46
THP1Q08231 YDR095CYDR095C 411 nt12.15□□□□□ -0.46
THP1Q08231 DCW1YKL046C 1350 nt12.13□□□□□ -0.47
THP1Q08231 FUN26YAL022C 1554 nt12.12□□□□□ -0.47
THP1Q08231 WWM1YFL010C 636 nt12.08□□□□□ -0.48
THP1Q08231 TRM9YML014W 840 nt12.05□□□□□ -0.48
THP1Q08231 ALF1YNL148C 765 nt12.03□□□□□ -0.48
THP1Q08231 LSM3YLR438C-A 270 nt11.99□□□□□ -0.49
THP1Q08231 EMI2YDR516C 1503 nt11.97□□□□□ -0.49
THP1Q08231 BDF1YLR399C 2061 nt11.96□□□□□ -0.49
THP1Q08231 YMR090WYMR090W 684 nt11.94□□□□□ -0.5
THP1Q08231 SHU1YHL006C 453 nt11.93□□□□□ -0.5
THP1Q08231 RPP2AYOL039W 321 nt11.93□□□□□ -0.5
THP1Q08231 CCT6YDR188W 1641 nt11.93□□□□□ -0.5
THP1Q08231 PTP1YDL230W 1008 nt11.9□□□□□ -0.5
THP1Q08231 YGR021WYGR021W 873 nt11.9□□□□□ -0.5
THP1Q08231 YFL021C-AYFL021C-A 855 nt11.88□□□□□ -0.51
THP1Q08231 YAL037C-BYAL037C-B 975 nt11.87□□□□□ -0.51
THP1Q08231 CAC2YML102W 1407 nt11.86□□□□□ -0.51
THP1Q08231 SUF2tP(AGG)C 72 nt11.86□□□□□ -0.51
THP1Q08231 SUF10tP(AGG)N 72 nt11.86□□□□□ -0.51
THP1Q08231 YDL221WYDL221W 552 nt11.85□□□□□ -0.51
THP1Q08231 YBR220CYBR220C 1683 nt11.84□□□□□ -0.51
THP1Q08231 HOM6YJR139C 1080 nt11.83□□□□□ -0.52
THP1Q08231 SIS1YNL007C 1059 nt11.83□□□□□ -0.52
THP1Q08231 TAT1YBR069C 1860 nt11.8□□□□□ -0.52
THP1Q08231 SDH1YKL148C 1923 nt11.77□□□□□ -0.53
THP1Q08231 MNP1YGL068W 585 nt11.73□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms