Protein–RNA interactions for Protein: P33421

SDH3, Succinate dehydrogenase [ubiquinone] cytochrome b subunit, mitochondrial, yeastyeast

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDH3P33421 YML009W-BYML009W-B 477 nt19.91■□□□□ 0.78
SDH3P33421 NSR1YGR159C 1245 nt19.9■□□□□ 0.78
SDH3P33421 NOP1YDL014W 984 nt19.31■□□□□ 0.68
SDH3P33421 YKL036CYKL036C 393 nt17.77■□□□□ 0.44
SDH3P33421 MDJ1YFL016C 1536 nt17.72■□□□□ 0.43
SDH3P33421 Q0297Q0297 156 nt16.93■□□□□ 0.3
SDH3P33421 SRX1YKL086W 384 nt16.92■□□□□ 0.3
SDH3P33421 YJL027CYJL027C 417 nt16.56■□□□□ 0.24
SDH3P33421 SCS3YGL126W 1143 nt16.15■□□□□ 0.18
SDH3P33421 YCR051WYCR051W 669 nt16■□□□□ 0.15
SDH3P33421 DBP2YNL112W 1641 nt15.72■□□□□ 0.11
SDH3P33421 YOL085CYOL085C 342 nt15.42■□□□□ 0.06
SDH3P33421 TRN1tP(UGG)A 72 nt15.35■□□□□ 0.05
SDH3P33421 SUF9tP(UGG)F 72 nt15.35■□□□□ 0.05
SDH3P33421 SUF8tP(UGG)H 72 nt15.35■□□□□ 0.05
SDH3P33421 tP(UGG)LtP(UGG)L 72 nt15.35■□□□□ 0.05
SDH3P33421 SUF7tP(UGG)M 72 nt15.35■□□□□ 0.05
SDH3P33421 tP(UGG)N1tP(UGG)N1 72 nt15.35■□□□□ 0.05
SDH3P33421 tP(UGG)N2tP(UGG)N2 72 nt15.35■□□□□ 0.05
SDH3P33421 tP(UGG)O1tP(UGG)O1 72 nt15.35■□□□□ 0.05
SDH3P33421 SUF11tP(UGG)O2 72 nt15.35■□□□□ 0.05
SDH3P33421 RPP1BYDL130W 321 nt15.18■□□□□ 0.02
SDH3P33421 PKP1YIL042C 1185 nt15.17■□□□□ 0.02
SDH3P33421 CCC1YLR220W 969 nt15.15■□□□□ 0.02
SDH3P33421 YBR190WYBR190W 312 nt15.14■□□□□ 0.01
SDH3P33421 RTC3YHR087W 336 nt14.75□□□□□ -0.05
SDH3P33421 RVS167YDR388W 1449 nt14.66□□□□□ -0.06
SDH3P33421 SCJ1YMR214W 1134 nt14.63□□□□□ -0.07
SDH3P33421 PET122YER153C 765 nt14.51□□□□□ -0.09
SDH3P33421 tP(UGG)O3tP(UGG)O3 72 nt14.49□□□□□ -0.09
SDH3P33421 ATS1YAL020C 1002 nt14.43□□□□□ -0.1
SDH3P33421 SCR1SCR1 522 nt14.29□□□□□ -0.12
SDH3P33421 SHR5YOL110W 714 nt14.16□□□□□ -0.14
SDH3P33421 RRN5YLR141W 1092 nt14.09□□□□□ -0.15
SDH3P33421 YDJ1YNL064C 1230 nt14.02□□□□□ -0.17
SDH3P33421 PUT4YOR348C 1884 nt13.85□□□□□ -0.19
SDH3P33421 YER088W-BYER088W-B 147 nt13.82□□□□□ -0.2
SDH3P33421 URN1YPR152C 1398 nt13.82□□□□□ -0.2
SDH3P33421 SSA3YBL075C 1950 nt13.79□□□□□ -0.2
SDH3P33421 DEP1YAL013W 1218 nt13.78□□□□□ -0.2
SDH3P33421 RSB1YOR049C 1065 nt13.74□□□□□ -0.21
SDH3P33421 GAR1YHR089C 618 nt13.7□□□□□ -0.22
SDH3P33421 OPI9YLR338W 858 nt13.65□□□□□ -0.22
SDH3P33421 SAH1YER043C 1350 nt13.58□□□□□ -0.24
SDH3P33421 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
SDH3P33421 RPN10YHR200W 807 nt13.55□□□□□ -0.24
SDH3P33421 YNL208WYNL208W 600 nt13.55□□□□□ -0.24
SDH3P33421 PST2YDR032C 597 nt13.4□□□□□ -0.26
SDH3P33421 POA1YBR022W 534 nt13.38□□□□□ -0.27
SDH3P33421 YHR049C-AYHR049C-A 297 nt13.35□□□□□ -0.27
SDH3P33421 TIR1YER011W 765 nt13.25□□□□□ -0.29
SDH3P33421 PUN1YLR414C 792 nt13.23□□□□□ -0.29
SDH3P33421 YJR018WYJR018W 363 nt13.17□□□□□ -0.3
SDH3P33421 SSA1YAL005C 1929 nt13.15□□□□□ -0.3
SDH3P33421 BSC6YOL137W 1494 nt13.1□□□□□ -0.31
SDH3P33421 PTC2YER089C 1395 nt13.09□□□□□ -0.31
SDH3P33421 YJR120WYJR120W 351 nt13.02□□□□□ -0.33
SDH3P33421 BUD23YCR047C 828 nt13.01□□□□□ -0.33
SDH3P33421 SRB2YHR041C 633 nt12.95□□□□□ -0.34
SDH3P33421 NAB2YGL122C 1578 nt12.93□□□□□ -0.34
SDH3P33421 SHU1YHL006C 453 nt12.86□□□□□ -0.35
SDH3P33421 RPP2BYDR382W 333 nt12.84□□□□□ -0.35
SDH3P33421 SPT5YML010W 3192 nt12.83□□□□□ -0.36
SDH3P33421 FIS1YIL065C 468 nt12.77□□□□□ -0.37
SDH3P33421 YKL097CYKL097C 411 nt12.77□□□□□ -0.37
SDH3P33421 DAL1YIR027C 1383 nt12.75□□□□□ -0.37
SDH3P33421 INM2YDR287W 879 nt12.71□□□□□ -0.37
SDH3P33421 WWM1YFL010C 636 nt12.67□□□□□ -0.38
SDH3P33421 YAL037C-BYAL037C-B 975 nt12.67□□□□□ -0.38
SDH3P33421 FPR4YLR449W 1179 nt12.67□□□□□ -0.38
SDH3P33421 PHO4YFR034C 939 nt12.63□□□□□ -0.39
SDH3P33421 BDH2YAL061W 1254 nt12.62□□□□□ -0.39
SDH3P33421 YBL100CYBL100C 315 nt12.57□□□□□ -0.4
SDH3P33421 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
SDH3P33421 HOM6YJR139C 1080 nt12.54□□□□□ -0.4
SDH3P33421 LSM3YLR438C-A 270 nt12.46□□□□□ -0.41
SDH3P33421 SSA4YER103W 1929 nt12.46□□□□□ -0.42
SDH3P33421 YFL021C-AYFL021C-A 855 nt12.45□□□□□ -0.42
SDH3P33421 MNP1YGL068W 585 nt12.44□□□□□ -0.42
SDH3P33421 FUN26YAL022C 1554 nt12.43□□□□□ -0.42
SDH3P33421 YPS1YLR120C 1710 nt12.43□□□□□ -0.42
SDH3P33421 TRM9YML014W 840 nt12.38□□□□□ -0.43
SDH3P33421 YDR095CYDR095C 411 nt12.34□□□□□ -0.43
SDH3P33421 RKM5YLR137W 1104 nt12.34□□□□□ -0.43
SDH3P33421 YOR139CYOR139C 393 nt12.34□□□□□ -0.43
SDH3P33421 MEP2YNL142W 1500 nt12.32□□□□□ -0.44
SDH3P33421 CCT6YDR188W 1641 nt12.29□□□□□ -0.44
SDH3P33421 YHR165W-AYHR165W-A 312 nt12.24□□□□□ -0.45
SDH3P33421 ALF1YNL148C 765 nt12.22□□□□□ -0.45
SDH3P33421 YOL037CYOL037C 354 nt12.19□□□□□ -0.46
SDH3P33421 NPL3YDR432W 1245 nt12.17□□□□□ -0.46
SDH3P33421 SUF2tP(AGG)C 72 nt12.14□□□□□ -0.47
SDH3P33421 SUF10tP(AGG)N 72 nt12.14□□□□□ -0.47
SDH3P33421 DCW1YKL046C 1350 nt12.13□□□□□ -0.47
SDH3P33421 SIS1YNL007C 1059 nt12.12□□□□□ -0.47
SDH3P33421 PTP1YDL230W 1008 nt12.11□□□□□ -0.47
SDH3P33421 RPP2AYOL039W 321 nt12.09□□□□□ -0.47
SDH3P33421 BDF1YLR399C 2061 nt12.07□□□□□ -0.48
SDH3P33421 CAC2YML102W 1407 nt12.01□□□□□ -0.49
SDH3P33421 EMI2YDR516C 1503 nt11.96□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms