Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 NSR1YGR159C 1245 nt16.33■□□□□ 0.2
CAF40P53829 YML009W-BYML009W-B 477 nt15.97■□□□□ 0.15
CAF40P53829 NOP1YDL014W 984 nt15.41■□□□□ 0.06
CAF40P53829 MDJ1YFL016C 1536 nt14.94□□□□□ -0.02
CAF40P53829 SSA3YBL075C 1950 nt14.29□□□□□ -0.12
CAF40P53829 YJL027CYJL027C 417 nt13.8□□□□□ -0.2
CAF40P53829 YKL036CYKL036C 393 nt13.68□□□□□ -0.22
CAF40P53829 SRX1YKL086W 384 nt13.38□□□□□ -0.27
CAF40P53829 Q0297Q0297 156 nt13.24□□□□□ -0.29
CAF40P53829 YBR190WYBR190W 312 nt13□□□□□ -0.33
CAF40P53829 DBP2YNL112W 1641 nt12.91□□□□□ -0.34
CAF40P53829 YCR051WYCR051W 669 nt12.68□□□□□ -0.38
CAF40P53829 RTC3YHR087W 336 nt12.62□□□□□ -0.39
CAF40P53829 PUT4YOR348C 1884 nt12.6□□□□□ -0.39
CAF40P53829 TRN1tP(UGG)A 72 nt12.36□□□□□ -0.43
CAF40P53829 SUF9tP(UGG)F 72 nt12.36□□□□□ -0.43
CAF40P53829 SUF8tP(UGG)H 72 nt12.36□□□□□ -0.43
CAF40P53829 tP(UGG)LtP(UGG)L 72 nt12.36□□□□□ -0.43
CAF40P53829 SUF7tP(UGG)M 72 nt12.36□□□□□ -0.43
CAF40P53829 tP(UGG)N1tP(UGG)N1 72 nt12.36□□□□□ -0.43
CAF40P53829 tP(UGG)N2tP(UGG)N2 72 nt12.36□□□□□ -0.43
CAF40P53829 tP(UGG)O1tP(UGG)O1 72 nt12.36□□□□□ -0.43
CAF40P53829 SUF11tP(UGG)O2 72 nt12.36□□□□□ -0.43
CAF40P53829 SSA4YER103W 1929 nt12.34□□□□□ -0.43
CAF40P53829 SPT5YML010W 3192 nt12.32□□□□□ -0.44
CAF40P53829 CCC1YLR220W 969 nt12.26□□□□□ -0.45
CAF40P53829 RVS167YDR388W 1449 nt12.22□□□□□ -0.45
CAF40P53829 SCS3YGL126W 1143 nt12.12□□□□□ -0.47
CAF40P53829 POA1YBR022W 534 nt12.09□□□□□ -0.47
CAF40P53829 ARE1YCR048W 1833 nt12.07□□□□□ -0.48
CAF40P53829 BSC6YOL137W 1494 nt12.03□□□□□ -0.48
CAF40P53829 BDF1YLR399C 2061 nt12.01□□□□□ -0.49
CAF40P53829 PAC11YDR488C 1602 nt11.98□□□□□ -0.49
CAF40P53829 RPP1BYDL130W 321 nt11.89□□□□□ -0.51
CAF40P53829 YHR049C-AYHR049C-A 297 nt11.88□□□□□ -0.51
CAF40P53829 SCJ1YMR214W 1134 nt11.88□□□□□ -0.51
CAF40P53829 TAT1YBR069C 1860 nt11.82□□□□□ -0.52
CAF40P53829 YOL085CYOL085C 342 nt11.81□□□□□ -0.52
CAF40P53829 NVJ2YPR091C 2313 nt11.79□□□□□ -0.52
CAF40P53829 SAH1YER043C 1350 nt11.7□□□□□ -0.54
CAF40P53829 PKP1YIL042C 1185 nt11.67□□□□□ -0.54
CAF40P53829 URN1YPR152C 1398 nt11.64□□□□□ -0.55
CAF40P53829 SHR5YOL110W 714 nt11.62□□□□□ -0.55
CAF40P53829 tP(UGG)O3tP(UGG)O3 72 nt11.54□□□□□ -0.56
CAF40P53829 OPI9YLR338W 858 nt11.53□□□□□ -0.56
CAF40P53829 BUD23YCR047C 828 nt11.51□□□□□ -0.57
CAF40P53829 MEP2YNL142W 1500 nt11.41□□□□□ -0.58
CAF40P53829 RPN10YHR200W 807 nt11.41□□□□□ -0.58
CAF40P53829 DEP1YAL013W 1218 nt11.4□□□□□ -0.58
CAF40P53829 PET122YER153C 765 nt11.37□□□□□ -0.59
CAF40P53829 FPS1YLL043W 2010 nt11.31□□□□□ -0.6
CAF40P53829 YNL208WYNL208W 600 nt11.24□□□□□ -0.61
CAF40P53829 PUN1YLR414C 792 nt11.23□□□□□ -0.61
CAF40P53829 SCR1SCR1 522 nt11.23□□□□□ -0.61
CAF40P53829 DCW1YKL046C 1350 nt11.21□□□□□ -0.61
CAF40P53829 NAB2YGL122C 1578 nt11.2□□□□□ -0.62
CAF40P53829 PTC2YER089C 1395 nt11.2□□□□□ -0.62
CAF40P53829 YDJ1YNL064C 1230 nt11.2□□□□□ -0.62
CAF40P53829 YBR220CYBR220C 1683 nt11.18□□□□□ -0.62
CAF40P53829 PCH2YBR186W 1695 nt11.04□□□□□ -0.64
CAF40P53829 YJR018WYJR018W 363 nt11.04□□□□□ -0.64
CAF40P53829 GUT2YIL155C 1950 nt11.03□□□□□ -0.64
CAF40P53829 EMI2YDR516C 1503 nt11.01□□□□□ -0.65
CAF40P53829 GAR1YHR089C 618 nt11□□□□□ -0.65
CAF40P53829 RRN5YLR141W 1092 nt11□□□□□ -0.65
CAF40P53829 YMR090WYMR090W 684 nt10.99□□□□□ -0.65
CAF40P53829 FIS1YIL065C 468 nt10.97□□□□□ -0.65
CAF40P53829 UME6YDR207C 2511 nt10.94□□□□□ -0.66
CAF40P53829 YPS1YLR120C 1710 nt10.93□□□□□ -0.66
CAF40P53829 SDH1YKL148C 1923 nt10.93□□□□□ -0.66
CAF40P53829 SEC11YIR022W 504 nt10.9□□□□□ -0.66
CAF40P53829 PIB2YGL023C 1908 nt10.87□□□□□ -0.67
CAF40P53829 DAL1YIR027C 1383 nt10.86□□□□□ -0.67
CAF40P53829 YDL221WYDL221W 552 nt10.85□□□□□ -0.67
CAF40P53829 YHR165W-AYHR165W-A 312 nt10.84□□□□□ -0.67
CAF40P53829 FPR4YLR449W 1179 nt10.81□□□□□ -0.68
CAF40P53829 Q0182Q0182 405 nt10.79□□□□□ -0.68
CAF40P53829 YER088W-BYER088W-B 147 nt10.77□□□□□ -0.69
CAF40P53829 PHO4YFR034C 939 nt10.77□□□□□ -0.69
CAF40P53829 RPP2BYDR382W 333 nt10.76□□□□□ -0.69
CAF40P53829 INM2YDR287W 879 nt10.75□□□□□ -0.69
CAF40P53829 ATS1YAL020C 1002 nt10.72□□□□□ -0.69
CAF40P53829 SCC4YER147C 1875 nt10.7□□□□□ -0.7
CAF40P53829 YDR095CYDR095C 411 nt10.69□□□□□ -0.7
CAF40P53829 SSA1YAL005C 1929 nt10.68□□□□□ -0.7
CAF40P53829 CAC2YML102W 1407 nt10.68□□□□□ -0.7
CAF40P53829 BOR1YNL275W 1731 nt10.67□□□□□ -0.7
CAF40P53829 TIR1YER011W 765 nt10.67□□□□□ -0.7
CAF40P53829 RSB1YOR049C 1065 nt10.67□□□□□ -0.7
CAF40P53829 RTF1YGL244W 1677 nt10.66□□□□□ -0.7
CAF40P53829 YJR120WYJR120W 351 nt10.62□□□□□ -0.71
CAF40P53829 YSC84YHR016C 1407 nt10.58□□□□□ -0.72
CAF40P53829 PTP1YDL230W 1008 nt10.57□□□□□ -0.72
CAF40P53829 PTK1YKL198C 1989 nt10.54□□□□□ -0.72
CAF40P53829 YBL100CYBL100C 315 nt10.53□□□□□ -0.72
CAF40P53829 IRC15YPL017C 1500 nt10.53□□□□□ -0.72
CAF40P53829 YHL050CYHL050C 2094 nt10.51□□□□□ -0.73
CAF40P53829 MCH5YOR306C 1566 nt10.49□□□□□ -0.73
CAF40P53829 RPP2AYOL039W 321 nt10.48□□□□□ -0.73
CAF40P53829 BOP3YNL042W 1191 nt10.47□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms