Protein–RNA interactions for Protein: Q06549

CDD1, Cytidine deaminase, yeastyeast

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDD1Q06549 YML009W-BYML009W-B 477 nt21.91■■□□□ 1.1
CDD1Q06549 NSR1YGR159C 1245 nt21.64■■□□□ 1.05
CDD1Q06549 NOP1YDL014W 984 nt21.33■■□□□ 1.01
CDD1Q06549 YKL036CYKL036C 393 nt19.87■□□□□ 0.77
CDD1Q06549 MDJ1YFL016C 1536 nt19.1■□□□□ 0.65
CDD1Q06549 Q0297Q0297 156 nt18.78■□□□□ 0.6
CDD1Q06549 SRX1YKL086W 384 nt18.69■□□□□ 0.58
CDD1Q06549 YJL027CYJL027C 417 nt18.58■□□□□ 0.56
CDD1Q06549 SCS3YGL126W 1143 nt18.2■□□□□ 0.5
CDD1Q06549 YCR051WYCR051W 669 nt17.73■□□□□ 0.43
CDD1Q06549 YOL085CYOL085C 342 nt17.25■□□□□ 0.35
CDD1Q06549 DBP2YNL112W 1641 nt17.01■□□□□ 0.31
CDD1Q06549 PKP1YIL042C 1185 nt16.98■□□□□ 0.31
CDD1Q06549 RPP1BYDL130W 321 nt16.85■□□□□ 0.29
CDD1Q06549 TRN1tP(UGG)A 72 nt16.81■□□□□ 0.28
CDD1Q06549 SUF9tP(UGG)F 72 nt16.81■□□□□ 0.28
CDD1Q06549 SUF8tP(UGG)H 72 nt16.81■□□□□ 0.28
CDD1Q06549 tP(UGG)LtP(UGG)L 72 nt16.81■□□□□ 0.28
CDD1Q06549 SUF7tP(UGG)M 72 nt16.81■□□□□ 0.28
CDD1Q06549 tP(UGG)N1tP(UGG)N1 72 nt16.81■□□□□ 0.28
CDD1Q06549 tP(UGG)N2tP(UGG)N2 72 nt16.81■□□□□ 0.28
CDD1Q06549 tP(UGG)O1tP(UGG)O1 72 nt16.81■□□□□ 0.28
CDD1Q06549 SUF11tP(UGG)O2 72 nt16.81■□□□□ 0.28
CDD1Q06549 CCC1YLR220W 969 nt16.65■□□□□ 0.26
CDD1Q06549 ATS1YAL020C 1002 nt16.33■□□□□ 0.2
CDD1Q06549 SCJ1YMR214W 1134 nt16.29■□□□□ 0.2
CDD1Q06549 YBR190WYBR190W 312 nt16.2■□□□□ 0.18
CDD1Q06549 PET122YER153C 765 nt16.1■□□□□ 0.17
CDD1Q06549 tP(UGG)O3tP(UGG)O3 72 nt15.96■□□□□ 0.15
CDD1Q06549 SCR1SCR1 522 nt15.9■□□□□ 0.14
CDD1Q06549 RVS167YDR388W 1449 nt15.9■□□□□ 0.14
CDD1Q06549 RTC3YHR087W 336 nt15.83■□□□□ 0.12
CDD1Q06549 RRN5YLR141W 1092 nt15.66■□□□□ 0.1
CDD1Q06549 SHR5YOL110W 714 nt15.43■□□□□ 0.06
CDD1Q06549 YDJ1YNL064C 1230 nt15.42■□□□□ 0.06
CDD1Q06549 YER088W-BYER088W-B 147 nt15.35■□□□□ 0.05
CDD1Q06549 RSB1YOR049C 1065 nt15.34■□□□□ 0.05
CDD1Q06549 PST2YDR032C 597 nt15.12■□□□□ 0.01
CDD1Q06549 GAR1YHR089C 618 nt15.06■□□□□ 0
CDD1Q06549 DEP1YAL013W 1218 nt14.98□□□□□ -0.01
CDD1Q06549 URN1YPR152C 1398 nt14.91□□□□□ -0.02
CDD1Q06549 YNL208WYNL208W 600 nt14.72□□□□□ -0.05
CDD1Q06549 OPI9YLR338W 858 nt14.66□□□□□ -0.06
CDD1Q06549 RPN10YHR200W 807 nt14.65□□□□□ -0.06
CDD1Q06549 PUT4YOR348C 1884 nt14.63□□□□□ -0.07
CDD1Q06549 TIR1YER011W 765 nt14.55□□□□□ -0.08
CDD1Q06549 YKL097CYKL097C 411 nt14.55□□□□□ -0.08
CDD1Q06549 SAH1YER043C 1350 nt14.55□□□□□ -0.08
CDD1Q06549 SHU1YHL006C 453 nt14.47□□□□□ -0.09
CDD1Q06549 ARE1YCR048W 1833 nt14.43□□□□□ -0.1
CDD1Q06549 SSA1YAL005C 1929 nt14.39□□□□□ -0.11
CDD1Q06549 SRB2YHR041C 633 nt14.24□□□□□ -0.13
CDD1Q06549 YJR018WYJR018W 363 nt14.23□□□□□ -0.13
CDD1Q06549 YAL037C-BYAL037C-B 975 nt14.21□□□□□ -0.13
CDD1Q06549 YHR049C-AYHR049C-A 297 nt14.2□□□□□ -0.14
CDD1Q06549 PUN1YLR414C 792 nt14.19□□□□□ -0.14
CDD1Q06549 POA1YBR022W 534 nt14.18□□□□□ -0.14
CDD1Q06549 YJR120WYJR120W 351 nt14.14□□□□□ -0.15
CDD1Q06549 PTC2YER089C 1395 nt14.04□□□□□ -0.16
CDD1Q06549 YOR139CYOR139C 393 nt14.02□□□□□ -0.17
CDD1Q06549 WWM1YFL010C 636 nt13.97□□□□□ -0.17
CDD1Q06549 RPP2BYDR382W 333 nt13.93□□□□□ -0.18
CDD1Q06549 HOM6YJR139C 1080 nt13.88□□□□□ -0.19
CDD1Q06549 BUD23YCR047C 828 nt13.87□□□□□ -0.19
CDD1Q06549 MNP1YGL068W 585 nt13.86□□□□□ -0.19
CDD1Q06549 YGR021WYGR021W 873 nt13.86□□□□□ -0.19
CDD1Q06549 BSC6YOL137W 1494 nt13.83□□□□□ -0.2
CDD1Q06549 SSA3YBL075C 1950 nt13.83□□□□□ -0.2
CDD1Q06549 NAB2YGL122C 1578 nt13.81□□□□□ -0.2
CDD1Q06549 NPL3YDR432W 1245 nt13.76□□□□□ -0.21
CDD1Q06549 BDH2YAL061W 1254 nt13.73□□□□□ -0.21
CDD1Q06549 INM2YDR287W 879 nt13.68□□□□□ -0.22
CDD1Q06549 YFL021C-AYFL021C-A 855 nt13.68□□□□□ -0.22
CDD1Q06549 FIS1YIL065C 468 nt13.67□□□□□ -0.22
CDD1Q06549 RKM5YLR137W 1104 nt13.67□□□□□ -0.22
CDD1Q06549 DAL1YIR027C 1383 nt13.66□□□□□ -0.22
CDD1Q06549 FPR4YLR449W 1179 nt13.63□□□□□ -0.23
CDD1Q06549 YOL037CYOL037C 354 nt13.62□□□□□ -0.23
CDD1Q06549 YBL100CYBL100C 315 nt13.59□□□□□ -0.23
CDD1Q06549 LSM3YLR438C-A 270 nt13.58□□□□□ -0.24
CDD1Q06549 PHO4YFR034C 939 nt13.55□□□□□ -0.24
CDD1Q06549 FUN26YAL022C 1554 nt13.45□□□□□ -0.26
CDD1Q06549 tM(CAU)CtM(CAU)C 72 nt13.45□□□□□ -0.26
CDD1Q06549 IMT4tM(CAU)E 72 nt13.45□□□□□ -0.26
CDD1Q06549 IMT3tM(CAU)J3 72 nt13.45□□□□□ -0.26
CDD1Q06549 IMT1tM(CAU)O1 72 nt13.45□□□□□ -0.26
CDD1Q06549 IMT2tM(CAU)P 72 nt13.45□□□□□ -0.26
CDD1Q06549 TRM9YML014W 840 nt13.43□□□□□ -0.26
CDD1Q06549 YLR281CYLR281C 468 nt13.36□□□□□ -0.27
CDD1Q06549 CCT6YDR188W 1641 nt13.31□□□□□ -0.28
CDD1Q06549 WHI5YOR083W 888 nt13.28□□□□□ -0.28
CDD1Q06549 PUS2YGL063W 1113 nt13.27□□□□□ -0.29
CDD1Q06549 YPS1YLR120C 1710 nt13.23□□□□□ -0.29
CDD1Q06549 YDR095CYDR095C 411 nt13.18□□□□□ -0.3
CDD1Q06549 ALF1YNL148C 765 nt13.16□□□□□ -0.3
CDD1Q06549 YLR154C-GYLR154C-G 150 nt13.13□□□□□ -0.31
CDD1Q06549 SPT5YML010W 3192 nt13.13□□□□□ -0.31
CDD1Q06549 SUF2tP(AGG)C 72 nt13.12□□□□□ -0.31
CDD1Q06549 SUF10tP(AGG)N 72 nt13.12□□□□□ -0.31
CDD1Q06549 YPR011CYPR011C 981 nt13.09□□□□□ -0.31
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms