Protein–RNA interactions for Protein: P41912

SHR5, Ras modification protein ERF4, yeastyeast

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHR5P41912 YML009W-BYML009W-B 477 nt18.77■□□□□ 0.6
SHR5P41912 NSR1YGR159C 1245 nt18.64■□□□□ 0.57
SHR5P41912 NOP1YDL014W 984 nt18.34■□□□□ 0.53
SHR5P41912 YKL036CYKL036C 393 nt16.92■□□□□ 0.3
SHR5P41912 MDJ1YFL016C 1536 nt16.43■□□□□ 0.22
SHR5P41912 Q0297Q0297 156 nt16.02■□□□□ 0.16
SHR5P41912 SRX1YKL086W 384 nt15.97■□□□□ 0.15
SHR5P41912 YJL027CYJL027C 417 nt15.8■□□□□ 0.12
SHR5P41912 SCS3YGL126W 1143 nt15.38■□□□□ 0.05
SHR5P41912 YCR051WYCR051W 669 nt15.15■□□□□ 0.02
SHR5P41912 YOL085CYOL085C 342 nt14.62□□□□□ -0.07
SHR5P41912 DBP2YNL112W 1641 nt14.55□□□□□ -0.08
SHR5P41912 TRN1tP(UGG)A 72 nt14.39□□□□□ -0.11
SHR5P41912 SUF9tP(UGG)F 72 nt14.39□□□□□ -0.11
SHR5P41912 SUF8tP(UGG)H 72 nt14.39□□□□□ -0.11
SHR5P41912 tP(UGG)LtP(UGG)L 72 nt14.39□□□□□ -0.11
SHR5P41912 SUF7tP(UGG)M 72 nt14.39□□□□□ -0.11
SHR5P41912 tP(UGG)N1tP(UGG)N1 72 nt14.39□□□□□ -0.11
SHR5P41912 tP(UGG)N2tP(UGG)N2 72 nt14.39□□□□□ -0.11
SHR5P41912 tP(UGG)O1tP(UGG)O1 72 nt14.39□□□□□ -0.11
SHR5P41912 SUF11tP(UGG)O2 72 nt14.39□□□□□ -0.11
SHR5P41912 RPP1BYDL130W 321 nt14.38□□□□□ -0.11
SHR5P41912 PKP1YIL042C 1185 nt14.36□□□□□ -0.11
SHR5P41912 CCC1YLR220W 969 nt14.24□□□□□ -0.13
SHR5P41912 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
SHR5P41912 RVS167YDR388W 1449 nt13.81□□□□□ -0.2
SHR5P41912 ATS1YAL020C 1002 nt13.78□□□□□ -0.2
SHR5P41912 RTC3YHR087W 336 nt13.75□□□□□ -0.21
SHR5P41912 SCJ1YMR214W 1134 nt13.75□□□□□ -0.21
SHR5P41912 PET122YER153C 765 nt13.69□□□□□ -0.22
SHR5P41912 SCR1SCR1 522 nt13.64□□□□□ -0.23
SHR5P41912 tP(UGG)O3tP(UGG)O3 72 nt13.63□□□□□ -0.23
SHR5P41912 RRN5YLR141W 1092 nt13.3□□□□□ -0.28
SHR5P41912 SHR5YOL110W 714 nt13.29□□□□□ -0.28
SHR5P41912 YDJ1YNL064C 1230 nt13.22□□□□□ -0.29
SHR5P41912 Q0182Q0182 405 nt13.11□□□□□ -0.31
SHR5P41912 RSB1YOR049C 1065 nt13.07□□□□□ -0.32
SHR5P41912 YER088W-BYER088W-B 147 nt13.05□□□□□ -0.32
SHR5P41912 GAR1YHR089C 618 nt12.88□□□□□ -0.35
SHR5P41912 URN1YPR152C 1398 nt12.87□□□□□ -0.35
SHR5P41912 DEP1YAL013W 1218 nt12.85□□□□□ -0.35
SHR5P41912 RPN10YHR200W 807 nt12.77□□□□□ -0.37
SHR5P41912 PST2YDR032C 597 nt12.75□□□□□ -0.37
SHR5P41912 YNL208WYNL208W 600 nt12.72□□□□□ -0.37
SHR5P41912 OPI9YLR338W 858 nt12.69□□□□□ -0.38
SHR5P41912 PUT4YOR348C 1884 nt12.68□□□□□ -0.38
SHR5P41912 MOT3YMR070W 1473 nt12.68□□□□□ -0.38
SHR5P41912 SAH1YER043C 1350 nt12.56□□□□□ -0.4
SHR5P41912 ARE1YCR048W 1833 nt12.47□□□□□ -0.41
SHR5P41912 TIR1YER011W 765 nt12.46□□□□□ -0.41
SHR5P41912 PUN1YLR414C 792 nt12.35□□□□□ -0.43
SHR5P41912 YHR049C-AYHR049C-A 297 nt12.31□□□□□ -0.44
SHR5P41912 YKL097CYKL097C 411 nt12.3□□□□□ -0.44
SHR5P41912 YJR018WYJR018W 363 nt12.29□□□□□ -0.44
SHR5P41912 POA1YBR022W 534 nt12.28□□□□□ -0.44
SHR5P41912 SSA1YAL005C 1929 nt12.27□□□□□ -0.45
SHR5P41912 SHU1YHL006C 453 nt12.2□□□□□ -0.46
SHR5P41912 PTC2YER089C 1395 nt12.15□□□□□ -0.46
SHR5P41912 RPP2BYDR382W 333 nt12.11□□□□□ -0.47
SHR5P41912 BUD23YCR047C 828 nt12.05□□□□□ -0.48
SHR5P41912 YJR120WYJR120W 351 nt12.03□□□□□ -0.48
SHR5P41912 NAB2YGL122C 1578 nt12.01□□□□□ -0.49
SHR5P41912 BSC6YOL137W 1494 nt12.01□□□□□ -0.49
SHR5P41912 SRB2YHR041C 633 nt11.99□□□□□ -0.49
SHR5P41912 YAL037C-BYAL037C-B 975 nt11.97□□□□□ -0.49
SHR5P41912 YGR021WYGR021W 873 nt11.92□□□□□ -0.5
SHR5P41912 WWM1YFL010C 636 nt11.89□□□□□ -0.51
SHR5P41912 INM2YDR287W 879 nt11.88□□□□□ -0.51
SHR5P41912 DAL1YIR027C 1383 nt11.87□□□□□ -0.51
SHR5P41912 BDH2YAL061W 1254 nt11.84□□□□□ -0.51
SHR5P41912 FPR4YLR449W 1179 nt11.82□□□□□ -0.52
SHR5P41912 HOM6YJR139C 1080 nt11.81□□□□□ -0.52
SHR5P41912 FIS1YIL065C 468 nt11.79□□□□□ -0.52
SHR5P41912 SSA3YBL075C 1950 nt11.78□□□□□ -0.52
SHR5P41912 YFL021C-AYFL021C-A 855 nt11.75□□□□□ -0.53
SHR5P41912 YBL100CYBL100C 315 nt11.75□□□□□ -0.53
SHR5P41912 MNP1YGL068W 585 nt11.73□□□□□ -0.53
SHR5P41912 YOR139CYOR139C 393 nt11.73□□□□□ -0.53
SHR5P41912 PHO4YFR034C 939 nt11.72□□□□□ -0.53
SHR5P41912 LSM3YLR438C-A 270 nt11.72□□□□□ -0.53
SHR5P41912 NPL3YDR432W 1245 nt11.7□□□□□ -0.54
SHR5P41912 RKM5YLR137W 1104 nt11.65□□□□□ -0.54
SHR5P41912 YOL037CYOL037C 354 nt11.64□□□□□ -0.55
SHR5P41912 TRM9YML014W 840 nt11.63□□□□□ -0.55
SHR5P41912 FUN26YAL022C 1554 nt11.6□□□□□ -0.55
SHR5P41912 CCT6YDR188W 1641 nt11.49□□□□□ -0.57
SHR5P41912 YPS1YLR120C 1710 nt11.48□□□□□ -0.57
SHR5P41912 ALF1YNL148C 765 nt11.46□□□□□ -0.57
SHR5P41912 SUF2tP(AGG)C 72 nt11.43□□□□□ -0.58
SHR5P41912 SUF10tP(AGG)N 72 nt11.43□□□□□ -0.58
SHR5P41912 YDR095CYDR095C 411 nt11.41□□□□□ -0.58
SHR5P41912 SPT5YML010W 3192 nt11.36□□□□□ -0.59
SHR5P41912 YHR165W-AYHR165W-A 312 nt11.36□□□□□ -0.59
SHR5P41912 YLR281CYLR281C 468 nt11.32□□□□□ -0.6
SHR5P41912 tM(CAU)CtM(CAU)C 72 nt11.3□□□□□ -0.6
SHR5P41912 IMT4tM(CAU)E 72 nt11.3□□□□□ -0.6
SHR5P41912 IMT3tM(CAU)J3 72 nt11.3□□□□□ -0.6
SHR5P41912 IMT1tM(CAU)O1 72 nt11.3□□□□□ -0.6
SHR5P41912 IMT2tM(CAU)P 72 nt11.3□□□□□ -0.6
SHR5P41912 WHI5YOR083W 888 nt11.28□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 10.6 ms