Protein–RNA interactions for Protein: P40043

RGI1, Respiratory growth induced protein 1, yeastyeast

Predicted RBP Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGI1P40043 NSR1YGR159C 1245 nt19.5■□□□□ 0.71
RGI1P40043 YML009W-BYML009W-B 477 nt19.34■□□□□ 0.69
RGI1P40043 NOP1YDL014W 984 nt18.7■□□□□ 0.58
RGI1P40043 MDJ1YFL016C 1536 nt17.57■□□□□ 0.4
RGI1P40043 YKL036CYKL036C 393 nt16.99■□□□□ 0.31
RGI1P40043 SRX1YKL086W 384 nt16.35■□□□□ 0.21
RGI1P40043 Q0297Q0297 156 nt16.29■□□□□ 0.2
RGI1P40043 YJL027CYJL027C 417 nt16.19■□□□□ 0.18
RGI1P40043 YCR051WYCR051W 669 nt15.47■□□□□ 0.07
RGI1P40043 DBP2YNL112W 1641 nt15.46■□□□□ 0.06
RGI1P40043 SCS3YGL126W 1143 nt15.31■□□□□ 0.04
RGI1P40043 YBR190WYBR190W 312 nt15.07■□□□□ 0
RGI1P40043 TRN1tP(UGG)A 72 nt14.95□□□□□ -0.02
RGI1P40043 SUF9tP(UGG)F 72 nt14.95□□□□□ -0.02
RGI1P40043 SUF8tP(UGG)H 72 nt14.95□□□□□ -0.02
RGI1P40043 tP(UGG)LtP(UGG)L 72 nt14.95□□□□□ -0.02
RGI1P40043 SUF7tP(UGG)M 72 nt14.95□□□□□ -0.02
RGI1P40043 tP(UGG)N1tP(UGG)N1 72 nt14.95□□□□□ -0.02
RGI1P40043 tP(UGG)N2tP(UGG)N2 72 nt14.95□□□□□ -0.02
RGI1P40043 tP(UGG)O1tP(UGG)O1 72 nt14.95□□□□□ -0.02
RGI1P40043 SUF11tP(UGG)O2 72 nt14.95□□□□□ -0.02
RGI1P40043 CCC1YLR220W 969 nt14.77□□□□□ -0.05
RGI1P40043 YOL085CYOL085C 342 nt14.73□□□□□ -0.05
RGI1P40043 RTC3YHR087W 336 nt14.69□□□□□ -0.06
RGI1P40043 RPP1BYDL130W 321 nt14.61□□□□□ -0.07
RGI1P40043 PKP1YIL042C 1185 nt14.52□□□□□ -0.09
RGI1P40043 RVS167YDR388W 1449 nt14.44□□□□□ -0.1
RGI1P40043 SCJ1YMR214W 1134 nt14.32□□□□□ -0.12
RGI1P40043 tP(UGG)O3tP(UGG)O3 72 nt14.05□□□□□ -0.16
RGI1P40043 PET122YER153C 765 nt13.99□□□□□ -0.17
RGI1P40043 PUT4YOR348C 1884 nt13.91□□□□□ -0.18
RGI1P40043 SHR5YOL110W 714 nt13.87□□□□□ -0.19
RGI1P40043 SCR1SCR1 522 nt13.75□□□□□ -0.21
RGI1P40043 URN1YPR152C 1398 nt13.67□□□□□ -0.22
RGI1P40043 SSA3YBL075C 1950 nt13.66□□□□□ -0.22
RGI1P40043 ATS1YAL020C 1002 nt13.62□□□□□ -0.23
RGI1P40043 YDJ1YNL064C 1230 nt13.6□□□□□ -0.23
RGI1P40043 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
RGI1P40043 DEP1YAL013W 1218 nt13.56□□□□□ -0.24
RGI1P40043 RRN5YLR141W 1092 nt13.55□□□□□ -0.24
RGI1P40043 OPI9YLR338W 858 nt13.54□□□□□ -0.24
RGI1P40043 SAH1YER043C 1350 nt13.51□□□□□ -0.25
RGI1P40043 POA1YBR022W 534 nt13.43□□□□□ -0.26
RGI1P40043 RPN10YHR200W 807 nt13.39□□□□□ -0.27
RGI1P40043 YHR049C-AYHR049C-A 297 nt13.38□□□□□ -0.27
RGI1P40043 YNL208WYNL208W 600 nt13.33□□□□□ -0.28
RGI1P40043 GAR1YHR089C 618 nt13.32□□□□□ -0.28
RGI1P40043 YER088W-BYER088W-B 147 nt13.29□□□□□ -0.28
RGI1P40043 BSC6YOL137W 1494 nt13.2□□□□□ -0.3
RGI1P40043 RSB1YOR049C 1065 nt13.17□□□□□ -0.3
RGI1P40043 PUN1YLR414C 792 nt13.13□□□□□ -0.31
RGI1P40043 BUD23YCR047C 828 nt13.03□□□□□ -0.32
RGI1P40043 YJR018WYJR018W 363 nt13.02□□□□□ -0.33
RGI1P40043 PTC2YER089C 1395 nt13.02□□□□□ -0.33
RGI1P40043 TIR1YER011W 765 nt12.9□□□□□ -0.34
RGI1P40043 NAB2YGL122C 1578 nt12.9□□□□□ -0.35
RGI1P40043 SPT5YML010W 3192 nt12.84□□□□□ -0.35
RGI1P40043 SSA1YAL005C 1929 nt12.81□□□□□ -0.36
RGI1P40043 YJR120WYJR120W 351 nt12.78□□□□□ -0.36
RGI1P40043 FIS1YIL065C 468 nt12.69□□□□□ -0.38
RGI1P40043 PST2YDR032C 597 nt12.67□□□□□ -0.38
RGI1P40043 RPP2BYDR382W 333 nt12.67□□□□□ -0.38
RGI1P40043 DAL1YIR027C 1383 nt12.67□□□□□ -0.38
RGI1P40043 FPR4YLR449W 1179 nt12.61□□□□□ -0.39
RGI1P40043 INM2YDR287W 879 nt12.6□□□□□ -0.39
RGI1P40043 PHO4YFR034C 939 nt12.55□□□□□ -0.4
RGI1P40043 SRB2YHR041C 633 nt12.55□□□□□ -0.4
RGI1P40043 SSA4YER103W 1929 nt12.47□□□□□ -0.41
RGI1P40043 MEP2YNL142W 1500 nt12.43□□□□□ -0.42
RGI1P40043 YBL100CYBL100C 315 nt12.42□□□□□ -0.42
RGI1P40043 YPS1YLR120C 1710 nt12.42□□□□□ -0.42
RGI1P40043 BDH2YAL061W 1254 nt12.39□□□□□ -0.43
RGI1P40043 YDR095CYDR095C 411 nt12.29□□□□□ -0.44
RGI1P40043 WWM1YFL010C 636 nt12.28□□□□□ -0.44
RGI1P40043 FUN26YAL022C 1554 nt12.27□□□□□ -0.44
RGI1P40043 YHR165W-AYHR165W-A 312 nt12.27□□□□□ -0.45
RGI1P40043 DCW1YKL046C 1350 nt12.23□□□□□ -0.45
RGI1P40043 SHU1YHL006C 453 nt12.22□□□□□ -0.45
RGI1P40043 TRM9YML014W 840 nt12.19□□□□□ -0.46
RGI1P40043 LSM3YLR438C-A 270 nt12.17□□□□□ -0.46
RGI1P40043 ALF1YNL148C 765 nt12.14□□□□□ -0.47
RGI1P40043 YGR021WYGR021W 873 nt12.12□□□□□ -0.47
RGI1P40043 YAL037C-BYAL037C-B 975 nt12.11□□□□□ -0.47
RGI1P40043 YFL021C-AYFL021C-A 855 nt12.1□□□□□ -0.47
RGI1P40043 CCT6YDR188W 1641 nt12.1□□□□□ -0.47
RGI1P40043 HOM6YJR139C 1080 nt12.07□□□□□ -0.48
RGI1P40043 EMI2YDR516C 1503 nt12.06□□□□□ -0.48
RGI1P40043 RPP2AYOL039W 321 nt12.06□□□□□ -0.48
RGI1P40043 PTP1YDL230W 1008 nt12.05□□□□□ -0.48
RGI1P40043 BDF1YLR399C 2061 nt12.04□□□□□ -0.48
RGI1P40043 SUF2tP(AGG)C 72 nt12□□□□□ -0.49
RGI1P40043 SUF10tP(AGG)N 72 nt12□□□□□ -0.49
RGI1P40043 YKL097CYKL097C 411 nt12□□□□□ -0.49
RGI1P40043 YMR090WYMR090W 684 nt12□□□□□ -0.49
RGI1P40043 CAC2YML102W 1407 nt12□□□□□ -0.49
RGI1P40043 SIS1YNL007C 1059 nt11.99□□□□□ -0.49
RGI1P40043 YDL221WYDL221W 552 nt11.96□□□□□ -0.49
RGI1P40043 MNP1YGL068W 585 nt11.96□□□□□ -0.49
RGI1P40043 YBR220CYBR220C 1683 nt11.94□□□□□ -0.5
RGI1P40043 RKM5YLR137W 1104 nt11.89□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms