RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C MET30P39014 640 aa3.28□□□□□ -1.88
RPA43YOR340C GDI1P39958 451 aaKnown RBP3.28□□□□□ -1.88
RPA43YOR340C YAT2P40017 923 aa3.28□□□□□ -1.88
RPA43YOR340C SEC28P40509 296 aaKnown RBP3.28□□□□□ -1.88
RPA43YOR340C RMD9P53140 646 aaKnown RBP3.28□□□□□ -1.88
RPA43YOR340C PRM1P53835 661 aa3.28□□□□□ -1.88
RPA43YOR340C VAC7P53950 1165 aa3.28□□□□□ -1.88
RPA43YOR340C ACL4Q03771 387 aa3.28□□□□□ -1.88
RPA43YOR340C URH1Q04179 340 aa3.28□□□□□ -1.88
RPA43YOR340C YLR281CQ05863 155 aa3.28□□□□□ -1.88
RPA43YOR340C COS7Q07788 383 aa3.28□□□□□ -1.88
RPA43YOR340C CMS1Q07897 291 aaKnown RBP3.28□□□□□ -1.88
RPA43YOR340C VAM3Q12241 283 aa3.28□□□□□ -1.88
RPA43YOR340C EFG1Q3E705 233 aaKnown RBP3.28□□□□□ -1.88
RPA43YOR340C SUC2P00724 532 aa3.27□□□□□ -1.89
RPA43YOR340C RAD3P06839 778 aa3.27□□□□□ -1.89
RPA43YOR340C YFL068WP0CX99 160 aa3.27□□□□□ -1.89
RPA43YOR340C YLL066W-AP0CY00 160 aa3.27□□□□□ -1.89
RPA43YOR340C YLL067W-AP0CY01 160 aa3.27□□□□□ -1.89
RPA43YOR340C ATP10P18496 279 aa3.27□□□□□ -1.89
RPA43YOR340C RBK1P25332 333 aa3.27□□□□□ -1.89
RPA43YOR340C MGR1P25573 417 aa3.27□□□□□ -1.89
RPA43YOR340C SRB4P32569 687 aa3.27□□□□□ -1.89
RPA43YOR340C UTH1P36135 365 aa3.27□□□□□ -1.89
RPA43YOR340C MSG5P38590 489 aa3.27□□□□□ -1.89
RPA43YOR340C TIM17P39515 158 aa3.27□□□□□ -1.89
RPA43YOR340C YMR134WP40207 237 aa3.27□□□□□ -1.89
RPA43YOR340C SYG1P40528 902 aa3.27□□□□□ -1.89
RPA43YOR340C POP1P41812 875 aa3.27□□□□□ -1.89
RPA43YOR340C TES1P41903 349 aaKnown RBP3.27□□□□□ -1.89
RPA43YOR340C GLG2P47011 380 aa3.27□□□□□ -1.89
RPA43YOR340C CWC22P53333 577 aaKnown RBP3.27□□□□□ -1.89
RPA43YOR340C YNL247WP53852 767 aaKnown RBP3.27□□□□□ -1.89
RPA43YOR340C HOT1Q03213 719 aa3.27□□□□□ -1.89
RPA43YOR340C MSS11Q03825 758 aa3.27□□□□□ -1.89
RPA43YOR340C YDR415CQ04033 374 aaPredicted RBP3.27□□□□□ -1.89
RPA43YOR340C SLD7Q08457 257 aa3.27□□□□□ -1.89
RPA43YOR340C NRT1Q08485 598 aa3.27□□□□□ -1.89
RPA43YOR340C NAG1Q8TGN9 163 aa3.27□□□□□ -1.89
RPA43YOR340C BRR1Q99177 341 aaPredicted RBP3.27□□□□□ -1.89
RPA43YOR340C RIP1P08067 215 aa3.26□□□□□ -1.89
RPA43YOR340C SCH9P11792 824 aaKnown RBP3.26□□□□□ -1.89
RPA43YOR340C CBF1P17106 351 aa3.26□□□□□ -1.89
RPA43YOR340C RRP7P25368 297 aaPredicted RBP3.26□□□□□ -1.89
RPA43YOR340C CIN8P27895 1000 aa3.26□□□□□ -1.89
RPA43YOR340C BRF1P29056 596 aa3.26□□□□□ -1.89
RPA43YOR340C HIR2P32480 875 aa3.26□□□□□ -1.89
RPA43YOR340C GCG1P32656 232 aaKnown RBP3.26□□□□□ -1.89
RPA43YOR340C SPC34P36131 295 aa3.26□□□□□ -1.89
RPA43YOR340C VHC1P38329 1120 aa3.26□□□□□ -1.89
RPA43YOR340C PFS1P38872 237 aa3.26□□□□□ -1.89
RPA43YOR340C CAJ1P39101 391 aa3.26□□□□□ -1.89
RPA43YOR340C SER3P40054 469 aa3.26□□□□□ -1.89
RPA43YOR340C YNL320WP42840 284 aa3.26□□□□□ -1.89
RPA43YOR340C YFL012WP43580 148 aa3.26□□□□□ -1.89
RPA43YOR340C YJL132WP47014 750 aa3.26□□□□□ -1.89
RPA43YOR340C NBP35P52920 328 aa3.26□□□□□ -1.89
RPA43YOR340C PEX25Q02969 394 aa3.26□□□□□ -1.89
RPA43YOR340C ENT5Q03769 411 aaKnown RBP3.26□□□□□ -1.89
RPA43YOR340C YMR130WQ04223 302 aa3.26□□□□□ -1.89
RPA43YOR340C YMR254CQ04838 102 aa3.26□□□□□ -1.89
RPA43YOR340C RSF1Q05043 376 aa3.26□□□□□ -1.89
RPA43YOR340C GLO2Q05584 274 aa3.26□□□□□ -1.89
RPA43YOR340C DCS1Q06151 350 aa3.26□□□□□ -1.89
RPA43YOR340C PHO92Q06390 306 aa3.26□□□□□ -1.89
RPA43YOR340C CLP1Q08685 445 aaPredicted RBP3.26□□□□□ -1.89
RPA43YOR340C SAM4Q08985 325 aaKnown RBP3.26□□□□□ -1.89
RPA43YOR340C YLL056CQ12177 298 aa3.26□□□□□ -1.89
RPA43YOR340C RMD5Q12508 421 aa3.26□□□□□ -1.89
RPA43YOR340C SEY1Q99287 776 aa3.26□□□□□ -1.89
RPA43YOR340C TOR1P35169 2470 aa3.26□□□□□ -1.89
RPA43YOR340C HFA1P32874 2273 aa3.25□□□□□ -1.89
RPA43YOR340C RPL40AP0CH08 128 aaKnown RBP3.25□□□□□ -1.89
RPA43YOR340C RPL40BP0CH09 128 aaKnown RBP3.25□□□□□ -1.89
RPA43YOR340C YCR007CP25354 239 aa3.25□□□□□ -1.89
RPA43YOR340C BEM1P29366 551 aa3.25□□□□□ -1.89
RPA43YOR340C TPS2P31688 896 aaKnown RBP3.25□□□□□ -1.89
RPA43YOR340C ACH1P32316 526 aa3.25□□□□□ -1.89
RPA43YOR340C PUP2P32379 260 aa3.25□□□□□ -1.89
RPA43YOR340C RAD5P32849 1169 aaPredicted RBP3.25□□□□□ -1.89
RPA43YOR340C LTV1P34078 463 aa3.25□□□□□ -1.89
RPA43YOR340C SRX1P36077 127 aa3.25□□□□□ -1.89
RPA43YOR340C CBP4P37267 147 aa3.25□□□□□ -1.89
RPA43YOR340C TAE1P38340 232 aa3.25□□□□□ -1.89
RPA43YOR340C BAT1P38891 393 aaKnown RBP3.25□□□□□ -1.89
RPA43YOR340C PCF11P39081 626 aaPredicted RBP3.25□□□□□ -1.89
RPA43YOR340C TIF34P40217 347 aaKnown RBP3.25□□□□□ -1.89
RPA43YOR340C BUD13P46947 266 aaPredicted RBP3.25□□□□□ -1.89
RPA43YOR340C COG7P53195 279 aa3.25□□□□□ -1.89
RPA43YOR340C GPI1P53306 609 aa3.25□□□□□ -1.89
RPA43YOR340C FRE4P53746 719 aa3.25□□□□□ -1.89
RPA43YOR340C SAM50P53969 484 aa3.25□□□□□ -1.89
RPA43YOR340C FMP42Q04991 504 aa3.25□□□□□ -1.89
RPA43YOR340C YPR114WQ06107 315 aa3.25□□□□□ -1.89
RPA43YOR340C GRS2Q06817 618 aa3.25□□□□□ -1.89
RPA43YOR340C YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
RPA43YOR340C ATG10Q07879 167 aa3.25□□□□□ -1.89
RPA43YOR340C AAD15Q08361 143 aa3.25□□□□□ -1.89
RPA43YOR340C PGC1Q08959 321 aa3.25□□□□□ -1.89
RPA43YOR340C RPN5Q12250 445 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms