Protein–RNA interactions for Protein: P38329

VHC1, Vacuolar cation-chloride cotransporter 1, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VHC1P38329 NSR1YGR159C 1245 nt21.08■□□□□ 0.97
VHC1P38329 YML009W-BYML009W-B 477 nt20.96■□□□□ 0.95
VHC1P38329 NOP1YDL014W 984 nt20.23■□□□□ 0.83
VHC1P38329 MDJ1YFL016C 1536 nt19.01■□□□□ 0.63
VHC1P38329 YKL036CYKL036C 393 nt18.42■□□□□ 0.54
VHC1P38329 SRX1YKL086W 384 nt17.7■□□□□ 0.42
VHC1P38329 Q0297Q0297 156 nt17.64■□□□□ 0.41
VHC1P38329 YJL027CYJL027C 417 nt17.5■□□□□ 0.39
VHC1P38329 YCR051WYCR051W 669 nt16.76■□□□□ 0.27
VHC1P38329 DBP2YNL112W 1641 nt16.73■□□□□ 0.27
VHC1P38329 SCS3YGL126W 1143 nt16.63■□□□□ 0.25
VHC1P38329 YBR190WYBR190W 312 nt16.27■□□□□ 0.2
VHC1P38329 TRN1tP(UGG)A 72 nt16.19■□□□□ 0.18
VHC1P38329 SUF9tP(UGG)F 72 nt16.19■□□□□ 0.18
VHC1P38329 SUF8tP(UGG)H 72 nt16.19■□□□□ 0.18
VHC1P38329 tP(UGG)LtP(UGG)L 72 nt16.19■□□□□ 0.18
VHC1P38329 SUF7tP(UGG)M 72 nt16.19■□□□□ 0.18
VHC1P38329 tP(UGG)N1tP(UGG)N1 72 nt16.19■□□□□ 0.18
VHC1P38329 tP(UGG)N2tP(UGG)N2 72 nt16.19■□□□□ 0.18
VHC1P38329 tP(UGG)O1tP(UGG)O1 72 nt16.19■□□□□ 0.18
VHC1P38329 SUF11tP(UGG)O2 72 nt16.19■□□□□ 0.18
VHC1P38329 CCC1YLR220W 969 nt16■□□□□ 0.15
VHC1P38329 YOL085CYOL085C 342 nt15.97■□□□□ 0.15
VHC1P38329 RTC3YHR087W 336 nt15.87■□□□□ 0.13
VHC1P38329 RPP1BYDL130W 321 nt15.83■□□□□ 0.12
VHC1P38329 PKP1YIL042C 1185 nt15.77■□□□□ 0.12
VHC1P38329 RVS167YDR388W 1449 nt15.6■□□□□ 0.09
VHC1P38329 SCJ1YMR214W 1134 nt15.52■□□□□ 0.08
VHC1P38329 tP(UGG)O3tP(UGG)O3 72 nt15.22■□□□□ 0.03
VHC1P38329 PET122YER153C 765 nt15.17■□□□□ 0.02
VHC1P38329 PUT4YOR348C 1884 nt15.03■□□□□ -0
VHC1P38329 SHR5YOL110W 714 nt15.02■□□□□ -0
VHC1P38329 SCR1SCR1 522 nt14.89□□□□□ -0.03
VHC1P38329 URN1YPR152C 1398 nt14.78□□□□□ -0.04
VHC1P38329 ATS1YAL020C 1002 nt14.78□□□□□ -0.04
VHC1P38329 YDJ1YNL064C 1230 nt14.72□□□□□ -0.05
VHC1P38329 RRN5YLR141W 1092 nt14.7□□□□□ -0.06
VHC1P38329 SSA3YBL075C 1950 nt14.7□□□□□ -0.06
VHC1P38329 DEP1YAL013W 1218 nt14.69□□□□□ -0.06
VHC1P38329 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
VHC1P38329 OPI9YLR338W 858 nt14.62□□□□□ -0.07
VHC1P38329 SAH1YER043C 1350 nt14.61□□□□□ -0.07
VHC1P38329 POA1YBR022W 534 nt14.52□□□□□ -0.09
VHC1P38329 YHR049C-AYHR049C-A 297 nt14.46□□□□□ -0.09
VHC1P38329 RPN10YHR200W 807 nt14.46□□□□□ -0.09
VHC1P38329 GAR1YHR089C 618 nt14.44□□□□□ -0.1
VHC1P38329 YNL208WYNL208W 600 nt14.42□□□□□ -0.1
VHC1P38329 YER088W-BYER088W-B 147 nt14.41□□□□□ -0.1
VHC1P38329 RSB1YOR049C 1065 nt14.29□□□□□ -0.12
VHC1P38329 BSC6YOL137W 1494 nt14.26□□□□□ -0.13
VHC1P38329 PUN1YLR414C 792 nt14.18□□□□□ -0.14
VHC1P38329 BUD23YCR047C 828 nt14.09□□□□□ -0.15
VHC1P38329 YJR018WYJR018W 363 nt14.07□□□□□ -0.16
VHC1P38329 PTC2YER089C 1395 nt14.07□□□□□ -0.16
VHC1P38329 TIR1YER011W 765 nt13.97□□□□□ -0.17
VHC1P38329 NAB2YGL122C 1578 nt13.92□□□□□ -0.18
VHC1P38329 SSA1YAL005C 1929 nt13.88□□□□□ -0.19
VHC1P38329 YJR120WYJR120W 351 nt13.84□□□□□ -0.19
VHC1P38329 SPT5YML010W 3192 nt13.84□□□□□ -0.19
VHC1P38329 PST2YDR032C 597 nt13.75□□□□□ -0.21
VHC1P38329 FIS1YIL065C 468 nt13.73□□□□□ -0.21
VHC1P38329 RPP2BYDR382W 333 nt13.69□□□□□ -0.22
VHC1P38329 DAL1YIR027C 1383 nt13.69□□□□□ -0.22
VHC1P38329 SRB2YHR041C 633 nt13.63□□□□□ -0.23
VHC1P38329 FPR4YLR449W 1179 nt13.63□□□□□ -0.23
VHC1P38329 INM2YDR287W 879 nt13.6□□□□□ -0.23
VHC1P38329 PHO4YFR034C 939 nt13.57□□□□□ -0.24
VHC1P38329 SSA4YER103W 1929 nt13.45□□□□□ -0.26
VHC1P38329 YBL100CYBL100C 315 nt13.43□□□□□ -0.26
VHC1P38329 MEP2YNL142W 1500 nt13.42□□□□□ -0.26
VHC1P38329 YPS1YLR120C 1710 nt13.41□□□□□ -0.26
VHC1P38329 BDH2YAL061W 1254 nt13.39□□□□□ -0.27
VHC1P38329 WWM1YFL010C 636 nt13.31□□□□□ -0.28
VHC1P38329 YDR095CYDR095C 411 nt13.28□□□□□ -0.28
VHC1P38329 FUN26YAL022C 1554 nt13.27□□□□□ -0.29
VHC1P38329 SHU1YHL006C 453 nt13.26□□□□□ -0.29
VHC1P38329 YHR165W-AYHR165W-A 312 nt13.26□□□□□ -0.29
VHC1P38329 DCW1YKL046C 1350 nt13.21□□□□□ -0.29
VHC1P38329 TRM9YML014W 840 nt13.17□□□□□ -0.3
VHC1P38329 YAL037C-BYAL037C-B 975 nt13.16□□□□□ -0.3
VHC1P38329 LSM3YLR438C-A 270 nt13.16□□□□□ -0.3
VHC1P38329 YGR021WYGR021W 873 nt13.12□□□□□ -0.31
VHC1P38329 ALF1YNL148C 765 nt13.11□□□□□ -0.31
VHC1P38329 YFL021C-AYFL021C-A 855 nt13.09□□□□□ -0.31
VHC1P38329 HOM6YJR139C 1080 nt13.09□□□□□ -0.31
VHC1P38329 CCT6YDR188W 1641 nt13.08□□□□□ -0.32
VHC1P38329 PTP1YDL230W 1008 nt13.03□□□□□ -0.32
VHC1P38329 YKL097CYKL097C 411 nt13.03□□□□□ -0.32
VHC1P38329 EMI2YDR516C 1503 nt13.03□□□□□ -0.32
VHC1P38329 RPP2AYOL039W 321 nt13.02□□□□□ -0.33
VHC1P38329 MNP1YGL068W 585 nt12.99□□□□□ -0.33
VHC1P38329 CAC2YML102W 1407 nt12.97□□□□□ -0.33
VHC1P38329 BDF1YLR399C 2061 nt12.97□□□□□ -0.33
VHC1P38329 SUF2tP(AGG)C 72 nt12.95□□□□□ -0.34
VHC1P38329 SUF10tP(AGG)N 72 nt12.95□□□□□ -0.34
VHC1P38329 SIS1YNL007C 1059 nt12.95□□□□□ -0.34
VHC1P38329 YMR090WYMR090W 684 nt12.92□□□□□ -0.34
VHC1P38329 YDL221WYDL221W 552 nt12.91□□□□□ -0.34
VHC1P38329 RKM5YLR137W 1104 nt12.89□□□□□ -0.35
VHC1P38329 YBR220CYBR220C 1683 nt12.88□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms