RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	FAR7	P43592	221 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	YJL055W	P47044	245 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	TWF1	P53250	332 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	TDA7	P53882	636 aa	Predicted RBP	3.21	□□□□□ -1.89
VPS33	YLR396C	SAM50	P53969	484 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	YDR239C	Q03780	787 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	SMP3	Q04174	516 aa		3.21	□□□□□ -1.89
VPS33	YLR396C	PET494	P07390	489 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	YML002W	P0CF17	737 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	ATR1	P13090	542 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	OM45	P16547	393 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	ALG1	P16661	449 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	PRP2	P20095	876 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	SEC1	P30619	724 aa	Known RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	RPT5	P33297	434 aa	Known RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	SHP1	P34223	423 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	PDX3	P38075	228 aa	Known RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	RXT2	P38255	430 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	TRM5	P38793	499 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	BZZ1	P38822	633 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	LCP5	P40079	357 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	DIM1	P41819	318 aa	Known RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	GCD14	P46959	383 aa	Predicted RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	VMA10	P48836	114 aa	Known RBP	3.21	□□□□□ -1.9
VPS33	YLR396C	ALT2	P52892	507 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	MIG2	P53035	382 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	SRL4	Q03085	281 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	YDR476C	Q03362	224 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	YDR278C	Q05612	105 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	DCS1	Q06151	350 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	YDL114W	Q07530	308 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	THP1	Q08231	455 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	ATG29	Q12092	213 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	CSR2	Q12734	1121 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	YDL007C-A	Q2V2Q0	85 aa		3.21	□□□□□ -1.9
VPS33	YLR396C	SUC2	P00724	532 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	CBF1	P17106	351 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	RRT12	P25381	491 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	RPC53	P25441	422 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	RPS5	P26783	225 aa	Known RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	ICL1	P28240	557 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	ERG3	P32353	365 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	CMC1	P36064	111 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	TCM62	P38228	572 aa	Known RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	TIF5	P38431	405 aa	Known RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	APE4	P38821	490 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	MAM33	P40513	266 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	ALB1	P47019	175 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	YGL108C	P53139	140 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YMR087W	Q04299	284 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	COX20	Q04935	205 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YPR078C	Q06813	372 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	EMP46	Q12396	444 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YLR462W	O13556	202 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	HEM15	P16622	393 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SEN2	P16658	377 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	VPS17	P32913	551 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	ECM15	P35195	104 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	BNA4	P38169	460 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YHL049C	P38722	271 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YEL075C	P39972	122 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	DSE1	P40077	573 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YER189W	P40104	122 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YTA12	P40341	825 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	GCD10	P41814	478 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YFL064C	P43540	174 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	FMP32	P43557	207 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SNX4	P47057	423 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	CUL3	P53202	744 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SLG1	P54867	378 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SED5	Q01590	340 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	ABZ2	Q03266	374 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SSQ1	Q05931	657 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	YPR172W	Q06608	200 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	GRS2	Q06817	618 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YEH2	Q07950	538 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YPR202W	Q08993	238 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	SNU66	Q12420	587 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS33	YLR396C	RTN2	Q12443	393 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	YBL111C	Q3E7Y5	667 aa		3.2	□□□□□ -1.9
VPS33	YLR396C	COR1	P07256	457 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	RED1	P14291	827 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	NMT1	P14743	455 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	TRS65	P32893	560 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	MSN2	P33748	704 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	PMT1	P33775	817 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	PEX5	P35056	612 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	RIM2	P38127	377 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	DUG2	P38149	878 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	VHC1	P38329	1120 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	MMS21	P38632	267 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	MBB1	P39534	108 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	RPH1	P39956	796 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	CSM2	P40465	213 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	SAD1	P43589	448 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	RQC1	Q05468	723 aa	Known RBP	3.19	□□□□□ -1.9
VPS33	YLR396C	GLO2	Q05584	274 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	BCP1	Q06338	283 aa		3.19	□□□□□ -1.9
VPS33	YLR396C	SNX3	Q08826	162 aa	Known RBP	3.19	□□□□□ -1.9
VPS33	YLR396C	ATP16	Q12165	160 aa		3.19	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms