Protein–RNA interactions for Protein: P40079

LCP5, U3 small nucleolar ribonucleoprotein protein LCP5, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCP5P40079 NSR1YGR159C 1245 nt21.38■■□□□ 1.01
LCP5P40079 YML009W-BYML009W-B 477 nt21.32■■□□□ 1
LCP5P40079 NOP1YDL014W 984 nt20.56■□□□□ 0.88
LCP5P40079 MDJ1YFL016C 1536 nt19.29■□□□□ 0.68
LCP5P40079 YKL036CYKL036C 393 nt18.76■□□□□ 0.59
LCP5P40079 SRX1YKL086W 384 nt17.99■□□□□ 0.47
LCP5P40079 Q0297Q0297 156 nt17.94■□□□□ 0.46
LCP5P40079 YJL027CYJL027C 417 nt17.73■□□□□ 0.43
LCP5P40079 YCR051WYCR051W 669 nt17.07■□□□□ 0.32
LCP5P40079 DBP2YNL112W 1641 nt16.98■□□□□ 0.31
LCP5P40079 SCS3YGL126W 1143 nt16.95■□□□□ 0.3
LCP5P40079 YBR190WYBR190W 312 nt16.47■□□□□ 0.23
LCP5P40079 TRN1tP(UGG)A 72 nt16.44■□□□□ 0.22
LCP5P40079 SUF9tP(UGG)F 72 nt16.44■□□□□ 0.22
LCP5P40079 SUF8tP(UGG)H 72 nt16.44■□□□□ 0.22
LCP5P40079 tP(UGG)LtP(UGG)L 72 nt16.44■□□□□ 0.22
LCP5P40079 SUF7tP(UGG)M 72 nt16.44■□□□□ 0.22
LCP5P40079 tP(UGG)N1tP(UGG)N1 72 nt16.44■□□□□ 0.22
LCP5P40079 tP(UGG)N2tP(UGG)N2 72 nt16.44■□□□□ 0.22
LCP5P40079 tP(UGG)O1tP(UGG)O1 72 nt16.44■□□□□ 0.22
LCP5P40079 SUF11tP(UGG)O2 72 nt16.44■□□□□ 0.22
LCP5P40079 CCC1YLR220W 969 nt16.3■□□□□ 0.2
LCP5P40079 YOL085CYOL085C 342 nt16.27■□□□□ 0.2
LCP5P40079 RPP1BYDL130W 321 nt16.1■□□□□ 0.17
LCP5P40079 RTC3YHR087W 336 nt16.1■□□□□ 0.17
LCP5P40079 PKP1YIL042C 1185 nt16.1■□□□□ 0.17
LCP5P40079 RVS167YDR388W 1449 nt15.82■□□□□ 0.12
LCP5P40079 SCJ1YMR214W 1134 nt15.76■□□□□ 0.11
LCP5P40079 tP(UGG)O3tP(UGG)O3 72 nt15.47■□□□□ 0.07
LCP5P40079 PET122YER153C 765 nt15.45■□□□□ 0.06
LCP5P40079 SHR5YOL110W 714 nt15.23■□□□□ 0.03
LCP5P40079 PUT4YOR348C 1884 nt15.2■□□□□ 0.02
LCP5P40079 SCR1SCR1 522 nt15.16■□□□□ 0.02
LCP5P40079 ATS1YAL020C 1002 nt15.08■□□□□ 0
LCP5P40079 URN1YPR152C 1398 nt14.99□□□□□ -0.01
LCP5P40079 RRN5YLR141W 1092 nt14.97□□□□□ -0.01
LCP5P40079 DEP1YAL013W 1218 nt14.94□□□□□ -0.02
LCP5P40079 YDJ1YNL064C 1230 nt14.94□□□□□ -0.02
LCP5P40079 ARE1YCR048W 1833 nt14.86□□□□□ -0.03
LCP5P40079 SAH1YER043C 1350 nt14.82□□□□□ -0.04
LCP5P40079 OPI9YLR338W 858 nt14.81□□□□□ -0.04
LCP5P40079 SSA3YBL075C 1950 nt14.8□□□□□ -0.04
LCP5P40079 POA1YBR022W 534 nt14.71□□□□□ -0.05
LCP5P40079 GAR1YHR089C 618 nt14.69□□□□□ -0.06
LCP5P40079 YER088W-BYER088W-B 147 nt14.67□□□□□ -0.06
LCP5P40079 YHR049C-AYHR049C-A 297 nt14.64□□□□□ -0.07
LCP5P40079 RPN10YHR200W 807 nt14.64□□□□□ -0.07
LCP5P40079 YNL208WYNL208W 600 nt14.62□□□□□ -0.07
LCP5P40079 RSB1YOR049C 1065 nt14.57□□□□□ -0.08
LCP5P40079 BSC6YOL137W 1494 nt14.43□□□□□ -0.1
LCP5P40079 PUN1YLR414C 792 nt14.36□□□□□ -0.11
LCP5P40079 BUD23YCR047C 828 nt14.29□□□□□ -0.12
LCP5P40079 YJR018WYJR018W 363 nt14.28□□□□□ -0.12
LCP5P40079 PTC2YER089C 1395 nt14.27□□□□□ -0.12
LCP5P40079 TIR1YER011W 765 nt14.2□□□□□ -0.14
LCP5P40079 SSA1YAL005C 1929 nt14.11□□□□□ -0.15
LCP5P40079 NAB2YGL122C 1578 nt14.1□□□□□ -0.15
LCP5P40079 YJR120WYJR120W 351 nt14.04□□□□□ -0.16
LCP5P40079 PST2YDR032C 597 nt14.02□□□□□ -0.17
LCP5P40079 SPT5YML010W 3192 nt13.98□□□□□ -0.17
LCP5P40079 FIS1YIL065C 468 nt13.89□□□□□ -0.19
LCP5P40079 RPP2BYDR382W 333 nt13.88□□□□□ -0.19
LCP5P40079 DAL1YIR027C 1383 nt13.86□□□□□ -0.19
LCP5P40079 SRB2YHR041C 633 nt13.86□□□□□ -0.19
LCP5P40079 FPR4YLR449W 1179 nt13.85□□□□□ -0.19
LCP5P40079 INM2YDR287W 879 nt13.77□□□□□ -0.21
LCP5P40079 PHO4YFR034C 939 nt13.75□□□□□ -0.21
LCP5P40079 YBL100CYBL100C 315 nt13.63□□□□□ -0.23
LCP5P40079 BDH2YAL061W 1254 nt13.59□□□□□ -0.23
LCP5P40079 YPS1YLR120C 1710 nt13.58□□□□□ -0.24
LCP5P40079 SSA4YER103W 1929 nt13.56□□□□□ -0.24
LCP5P40079 MEP2YNL142W 1500 nt13.56□□□□□ -0.24
LCP5P40079 WWM1YFL010C 636 nt13.56□□□□□ -0.24
LCP5P40079 SHU1YHL006C 453 nt13.53□□□□□ -0.24
LCP5P40079 FUN26YAL022C 1554 nt13.46□□□□□ -0.25
LCP5P40079 YAL037C-BYAL037C-B 975 nt13.44□□□□□ -0.26
LCP5P40079 YDR095CYDR095C 411 nt13.43□□□□□ -0.26
LCP5P40079 YHR165W-AYHR165W-A 312 nt13.43□□□□□ -0.26
LCP5P40079 DCW1YKL046C 1350 nt13.38□□□□□ -0.27
LCP5P40079 TRM9YML014W 840 nt13.38□□□□□ -0.27
LCP5P40079 LSM3YLR438C-A 270 nt13.34□□□□□ -0.27
LCP5P40079 YGR021WYGR021W 873 nt13.33□□□□□ -0.28
LCP5P40079 HOM6YJR139C 1080 nt13.31□□□□□ -0.28
LCP5P40079 YKL097CYKL097C 411 nt13.31□□□□□ -0.28
LCP5P40079 ALF1YNL148C 765 nt13.3□□□□□ -0.28
LCP5P40079 YFL021C-AYFL021C-A 855 nt13.29□□□□□ -0.28
LCP5P40079 CCT6YDR188W 1641 nt13.25□□□□□ -0.29
LCP5P40079 MNP1YGL068W 585 nt13.24□□□□□ -0.29
LCP5P40079 PTP1YDL230W 1008 nt13.19□□□□□ -0.3
LCP5P40079 RPP2AYOL039W 321 nt13.19□□□□□ -0.3
LCP5P40079 EMI2YDR516C 1503 nt13.18□□□□□ -0.3
LCP5P40079 CAC2YML102W 1407 nt13.15□□□□□ -0.3
LCP5P40079 SUF2tP(AGG)C 72 nt13.13□□□□□ -0.31
LCP5P40079 SUF10tP(AGG)N 72 nt13.13□□□□□ -0.31
LCP5P40079 SIS1YNL007C 1059 nt13.13□□□□□ -0.31
LCP5P40079 RKM5YLR137W 1104 nt13.11□□□□□ -0.31
LCP5P40079 BDF1YLR399C 2061 nt13.08□□□□□ -0.32
LCP5P40079 YMR090WYMR090W 684 nt13.05□□□□□ -0.32
LCP5P40079 YDL221WYDL221W 552 nt13.04□□□□□ -0.32
LCP5P40079 YBR220CYBR220C 1683 nt13.01□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms