Protein–RNA interactions for Protein: P0CF17

YML002W, UPF0507 protein YML002W, yeastyeast

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YML002WP0CF17 NSR1YGR159C 1245 nt20.97■□□□□ 0.95
YML002WP0CF17 YML009W-BYML009W-B 477 nt20.93■□□□□ 0.94
YML002WP0CF17 NOP1YDL014W 984 nt20.15■□□□□ 0.82
YML002WP0CF17 MDJ1YFL016C 1536 nt18.99■□□□□ 0.63
YML002WP0CF17 YKL036CYKL036C 393 nt18.35■□□□□ 0.53
YML002WP0CF17 SRX1YKL086W 384 nt17.61■□□□□ 0.41
YML002WP0CF17 Q0297Q0297 156 nt17.53■□□□□ 0.4
YML002WP0CF17 YJL027CYJL027C 417 nt17.47■□□□□ 0.39
YML002WP0CF17 YCR051WYCR051W 669 nt16.75■□□□□ 0.27
YML002WP0CF17 DBP2YNL112W 1641 nt16.64■□□□□ 0.25
YML002WP0CF17 SCS3YGL126W 1143 nt16.56■□□□□ 0.24
YML002WP0CF17 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
YML002WP0CF17 TRN1tP(UGG)A 72 nt16.11■□□□□ 0.17
YML002WP0CF17 SUF9tP(UGG)F 72 nt16.11■□□□□ 0.17
YML002WP0CF17 SUF8tP(UGG)H 72 nt16.11■□□□□ 0.17
YML002WP0CF17 tP(UGG)LtP(UGG)L 72 nt16.11■□□□□ 0.17
YML002WP0CF17 SUF7tP(UGG)M 72 nt16.11■□□□□ 0.17
YML002WP0CF17 tP(UGG)N1tP(UGG)N1 72 nt16.11■□□□□ 0.17
YML002WP0CF17 tP(UGG)N2tP(UGG)N2 72 nt16.11■□□□□ 0.17
YML002WP0CF17 tP(UGG)O1tP(UGG)O1 72 nt16.11■□□□□ 0.17
YML002WP0CF17 SUF11tP(UGG)O2 72 nt16.11■□□□□ 0.17
YML002WP0CF17 CCC1YLR220W 969 nt16.03■□□□□ 0.16
YML002WP0CF17 YOL085CYOL085C 342 nt15.91■□□□□ 0.14
YML002WP0CF17 RTC3YHR087W 336 nt15.89■□□□□ 0.13
YML002WP0CF17 PKP1YIL042C 1185 nt15.78■□□□□ 0.12
YML002WP0CF17 RPP1BYDL130W 321 nt15.75■□□□□ 0.11
YML002WP0CF17 RVS167YDR388W 1449 nt15.56■□□□□ 0.08
YML002WP0CF17 SCJ1YMR214W 1134 nt15.46■□□□□ 0.07
YML002WP0CF17 tP(UGG)O3tP(UGG)O3 72 nt15.17■□□□□ 0.02
YML002WP0CF17 PET122YER153C 765 nt15.13■□□□□ 0.01
YML002WP0CF17 SHR5YOL110W 714 nt14.94□□□□□ -0.02
YML002WP0CF17 PUT4YOR348C 1884 nt14.94□□□□□ -0.02
YML002WP0CF17 SSA3YBL075C 1950 nt14.89□□□□□ -0.03
YML002WP0CF17 SCR1SCR1 522 nt14.85□□□□□ -0.03
YML002WP0CF17 URN1YPR152C 1398 nt14.74□□□□□ -0.05
YML002WP0CF17 ATS1YAL020C 1002 nt14.72□□□□□ -0.05
YML002WP0CF17 DEP1YAL013W 1218 nt14.71□□□□□ -0.05
YML002WP0CF17 RRN5YLR141W 1092 nt14.67□□□□□ -0.06
YML002WP0CF17 YDJ1YNL064C 1230 nt14.63□□□□□ -0.07
YML002WP0CF17 ARE1YCR048W 1833 nt14.59□□□□□ -0.07
YML002WP0CF17 SAH1YER043C 1350 nt14.59□□□□□ -0.07
YML002WP0CF17 OPI9YLR338W 858 nt14.55□□□□□ -0.08
YML002WP0CF17 POA1YBR022W 534 nt14.51□□□□□ -0.09
YML002WP0CF17 YHR049C-AYHR049C-A 297 nt14.44□□□□□ -0.1
YML002WP0CF17 GAR1YHR089C 618 nt14.43□□□□□ -0.1
YML002WP0CF17 RPN10YHR200W 807 nt14.42□□□□□ -0.1
YML002WP0CF17 YNL208WYNL208W 600 nt14.37□□□□□ -0.11
YML002WP0CF17 YER088W-BYER088W-B 147 nt14.36□□□□□ -0.11
YML002WP0CF17 RSB1YOR049C 1065 nt14.29□□□□□ -0.12
YML002WP0CF17 BSC6YOL137W 1494 nt14.23□□□□□ -0.13
YML002WP0CF17 PUN1YLR414C 792 nt14.12□□□□□ -0.15
YML002WP0CF17 BUD23YCR047C 828 nt14.11□□□□□ -0.15
YML002WP0CF17 PTC2YER089C 1395 nt14.05□□□□□ -0.16
YML002WP0CF17 YJR018WYJR018W 363 nt14.04□□□□□ -0.16
YML002WP0CF17 TIR1YER011W 765 nt13.92□□□□□ -0.18
YML002WP0CF17 NAB2YGL122C 1578 nt13.87□□□□□ -0.19
YML002WP0CF17 SSA1YAL005C 1929 nt13.82□□□□□ -0.2
YML002WP0CF17 YJR120WYJR120W 351 nt13.77□□□□□ -0.21
YML002WP0CF17 FPR4YLR449W 1179 nt13.68□□□□□ -0.22
YML002WP0CF17 SPT5YML010W 3192 nt13.67□□□□□ -0.22
YML002WP0CF17 PST2YDR032C 597 nt13.66□□□□□ -0.22
YML002WP0CF17 RPP2BYDR382W 333 nt13.66□□□□□ -0.22
YML002WP0CF17 FIS1YIL065C 468 nt13.65□□□□□ -0.22
YML002WP0CF17 DAL1YIR027C 1383 nt13.63□□□□□ -0.23
YML002WP0CF17 SRB2YHR041C 633 nt13.58□□□□□ -0.24
YML002WP0CF17 INM2YDR287W 879 nt13.54□□□□□ -0.24
YML002WP0CF17 PHO4YFR034C 939 nt13.52□□□□□ -0.25
YML002WP0CF17 YBL100CYBL100C 315 nt13.4□□□□□ -0.26
YML002WP0CF17 SSA4YER103W 1929 nt13.37□□□□□ -0.27
YML002WP0CF17 MEP2YNL142W 1500 nt13.35□□□□□ -0.27
YML002WP0CF17 YPS1YLR120C 1710 nt13.33□□□□□ -0.27
YML002WP0CF17 BDH2YAL061W 1254 nt13.33□□□□□ -0.28
YML002WP0CF17 WWM1YFL010C 636 nt13.29□□□□□ -0.28
YML002WP0CF17 YHR165W-AYHR165W-A 312 nt13.26□□□□□ -0.29
YML002WP0CF17 FUN26YAL022C 1554 nt13.23□□□□□ -0.29
YML002WP0CF17 SHU1YHL006C 453 nt13.22□□□□□ -0.29
YML002WP0CF17 YDR095CYDR095C 411 nt13.21□□□□□ -0.29
YML002WP0CF17 DCW1YKL046C 1350 nt13.19□□□□□ -0.3
YML002WP0CF17 YAL037C-BYAL037C-B 975 nt13.16□□□□□ -0.3
YML002WP0CF17 TRM9YML014W 840 nt13.15□□□□□ -0.3
YML002WP0CF17 ALF1YNL148C 765 nt13.11□□□□□ -0.31
YML002WP0CF17 LSM3YLR438C-A 270 nt13.07□□□□□ -0.32
YML002WP0CF17 YGR021WYGR021W 873 nt13.05□□□□□ -0.32
YML002WP0CF17 YFL021C-AYFL021C-A 855 nt13.02□□□□□ -0.33
YML002WP0CF17 HOM6YJR139C 1080 nt13.02□□□□□ -0.33
YML002WP0CF17 CCT6YDR188W 1641 nt12.99□□□□□ -0.33
YML002WP0CF17 EMI2YDR516C 1503 nt12.99□□□□□ -0.33
YML002WP0CF17 YKL097CYKL097C 411 nt12.99□□□□□ -0.33
YML002WP0CF17 RPP2AYOL039W 321 nt12.98□□□□□ -0.33
YML002WP0CF17 MNP1YGL068W 585 nt12.97□□□□□ -0.33
YML002WP0CF17 PTP1YDL230W 1008 nt12.95□□□□□ -0.34
YML002WP0CF17 CAC2YML102W 1407 nt12.93□□□□□ -0.34
YML002WP0CF17 SUF2tP(AGG)C 72 nt12.91□□□□□ -0.34
YML002WP0CF17 SUF10tP(AGG)N 72 nt12.91□□□□□ -0.34
YML002WP0CF17 YMR090WYMR090W 684 nt12.88□□□□□ -0.35
YML002WP0CF17 SIS1YNL007C 1059 nt12.88□□□□□ -0.35
YML002WP0CF17 YDL221WYDL221W 552 nt12.85□□□□□ -0.35
YML002WP0CF17 RKM5YLR137W 1104 nt12.84□□□□□ -0.35
YML002WP0CF17 BDF1YLR399C 2061 nt12.84□□□□□ -0.35
YML002WP0CF17 YBR220CYBR220C 1683 nt12.81□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms