RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C DRS1P32892 752 aaKnown RBP10.7□□□□□ -0.7
VPS33YLR396C MTC1P47018 478 aaKnown RBP10.65□□□□□ -0.7
VPS33YLR396C BFR2Q06631 534 aaKnown RBP9.27□□□□□ -0.93
VPS33YLR396C DIP2Q12220 943 aaPredicted RBP9.11□□□□□ -0.95
VPS33YLR396C AVT3P36062 692 aa9.03□□□□□ -0.96
VPS33YLR396C TFA1P36100 482 aa8.76□□□□□ -1.01
VPS33YLR396C FAP1P53971 965 aa8.67□□□□□ -1.02
VPS33YLR396C ISW2Q08773 1120 aa8.64□□□□□ -1.03
VPS33YLR396C RSE1Q04693 1361 aaKnown RBP8.58□□□□□ -1.04
VPS33YLR396C PRI1P10363 409 aa8.55□□□□□ -1.04
VPS33YLR396C RPG1P38249 964 aaKnown RBP8.53□□□□□ -1.04
VPS33YLR396C AAD16Q02895 342 aa8.37□□□□□ -1.07
VPS33YLR396C RPL17AP05740 184 aaKnown RBP8.26□□□□□ -1.09
VPS33YLR396C RPL17BP46990 184 aaKnown RBP8.26□□□□□ -1.09
VPS33YLR396C REB1P21538 810 aa8.14□□□□□ -1.11
VPS33YLR396C PRY3P47033 881 aa8.12□□□□□ -1.11
VPS33YLR396C TSR3Q12094 313 aaKnown RBP8.1□□□□□ -1.11
VPS33YLR396C SPT21P35209 758 aa8□□□□□ -1.13
VPS33YLR396C RIM101P33400 625 aa7.88□□□□□ -1.15
VPS33YLR396C MRPL32P25348 183 aa7.77□□□□□ -1.17
VPS33YLR396C YCK3P39962 524 aa7.74□□□□□ -1.17
VPS33YLR396C YKR023WP36119 530 aaKnown RBP7.72□□□□□ -1.17
VPS33YLR396C HAA1Q12753 694 aaKnown RBP7.67□□□□□ -1.18
VPS33YLR396C OXP1P28273 1286 aa7.64□□□□□ -1.19
VPS33YLR396C PTP3P40048 928 aa7.59□□□□□ -1.19
VPS33YLR396C TFC8Q12308 588 aa7.56□□□□□ -1.2
VPS33YLR396C HOP09932 586 aa7.55□□□□□ -1.2
VPS33YLR396C CDC27P38042 758 aa7.55□□□□□ -1.2
VPS33YLR396C SSP1P38871 571 aa7.53□□□□□ -1.2
VPS33YLR396C DCD1P06773 312 aa7.5□□□□□ -1.21
VPS33YLR396C YAH1Q12184 172 aaKnown RBP7.5□□□□□ -1.21
VPS33YLR396C YIL055CP40523 627 aaKnown RBP7.49□□□□□ -1.21
VPS33YLR396C YLR271WQ06152 274 aa7.43□□□□□ -1.22
VPS33YLR396C RQC2Q12532 1038 aaKnown RBP7.4□□□□□ -1.23
VPS33YLR396C RSM7P47150 247 aa7.39□□□□□ -1.23
VPS33YLR396C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
VPS33YLR396C BCH2P36122 765 aa7.34□□□□□ -1.23
VPS33YLR396C AI2P03876 854 aa7.27□□□□□ -1.25
VPS33YLR396C MGA2P40578 1113 aa7.26□□□□□ -1.25
VPS33YLR396C YGL015CP33199 130 aa7.24□□□□□ -1.25
VPS33YLR396C PSD2P53037 1138 aaKnown RBP7.24□□□□□ -1.25
VPS33YLR396C UBP10P53874 792 aaPredicted RBP7.23□□□□□ -1.25
VPS33YLR396C MAP2P38174 421 aaKnown RBP7.21□□□□□ -1.25
VPS33YLR396C EPS1P40557 701 aa7.21□□□□□ -1.25
VPS33YLR396C DMA1P38823 416 aa7.21□□□□□ -1.26
VPS33YLR396C BBC1P47068 1157 aa7.21□□□□□ -1.26
VPS33YLR396C CST9Q06032 482 aa7.21□□□□□ -1.26
VPS33YLR396C SCY1P53009 804 aa7.2□□□□□ -1.26
VPS33YLR396C BDF1P35817 686 aa7.16□□□□□ -1.26
VPS33YLR396C SLX5P32828 619 aaKnown RBP7.07□□□□□ -1.28
VPS33YLR396C MRM1P25270 412 aa7.05□□□□□ -1.28
VPS33YLR396C RCR1P38212 213 aa6.96□□□□□ -1.29
VPS33YLR396C RTG3P38165 486 aa6.96□□□□□ -1.3
VPS33YLR396C RAM2P29703 316 aa6.95□□□□□ -1.3
VPS33YLR396C TIF4632P39936 914 aaKnown RBP6.91□□□□□ -1.3
VPS33YLR396C VPS29P38759 282 aa6.89□□□□□ -1.31
VPS33YLR396C TGL3P40308 642 aa6.88□□□□□ -1.31
VPS33YLR396C SAS10Q12136 610 aaPredicted RBP6.85□□□□□ -1.31
VPS33YLR396C MAK11P20484 414 aaKnown RBP6.84□□□□□ -1.31
VPS33YLR396C NSR1P27476 414 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
VPS33YLR396C YMR1P47147 688 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
VPS33YLR396C SET1P38827 1080 aaKnown RBP6.8□□□□□ -1.32
VPS33YLR396C STS1P38637 319 aa6.79□□□□□ -1.32
VPS33YLR396C YOR238WQ08634 303 aa6.78□□□□□ -1.32
VPS33YLR396C DBP1P24784 617 aaKnown RBP6.77□□□□□ -1.33
VPS33YLR396C YAP5P40574 245 aa6.77□□□□□ -1.33
VPS33YLR396C YFR006WP43590 535 aa6.75□□□□□ -1.33
VPS33YLR396C COQ8P27697 501 aa6.74□□□□□ -1.33
VPS33YLR396C YPR148CQ06523 435 aa6.72□□□□□ -1.33
VPS33YLR396C PIB1Q06651 286 aa6.7□□□□□ -1.34
VPS33YLR396C MST1P07236 462 aa6.7□□□□□ -1.34
VPS33YLR396C EDS1P38073 919 aa6.69□□□□□ -1.34
VPS33YLR396C IFH1P39520 1085 aa6.69□□□□□ -1.34
VPS33YLR396C MIF2P35201 549 aa6.69□□□□□ -1.34
VPS33YLR396C NOP53Q12080 455 aaKnown RBP6.69□□□□□ -1.34
VPS33YLR396C VMA1P17255 1071 aaKnown RBP6.65□□□□□ -1.35
VPS33YLR396C VPS70P47161 811 aa6.65□□□□□ -1.35
VPS33YLR396C PTC3P34221 468 aaKnown RBP6.63□□□□□ -1.35
VPS33YLR396C LEU3P08638 886 aa6.62□□□□□ -1.35
VPS33YLR396C CKB1P43639 278 aa6.62□□□□□ -1.35
VPS33YLR396C SAM3Q08986 587 aa6.59□□□□□ -1.35
VPS33YLR396C GTT3P39996 337 aa6.57□□□□□ -1.36
VPS33YLR396C LEO1P38439 464 aa6.54□□□□□ -1.36
VPS33YLR396C GRE2Q12068 342 aaKnown RBP6.54□□□□□ -1.36
VPS33YLR396C SPB4P25808 606 aaPredicted RBP6.53□□□□□ -1.36
VPS33YLR396C GUT1P32190 709 aa6.53□□□□□ -1.36
VPS33YLR396C ATH1P48016 1211 aa6.53□□□□□ -1.36
VPS33YLR396C YOL036WQ08206 761 aa6.51□□□□□ -1.37
VPS33YLR396C GYP5Q12344 894 aa6.51□□□□□ -1.37
VPS33YLR396C PBS2P08018 668 aa6.51□□□□□ -1.37
VPS33YLR396C DSF2P38213 736 aa6.51□□□□□ -1.37
VPS33YLR396C REF2P42073 533 aaPredicted RBP6.51□□□□□ -1.37
VPS33YLR396C SET4P42948 560 aa6.48□□□□□ -1.37
VPS33YLR396C MSB4Q12317 492 aa6.48□□□□□ -1.37
VPS33YLR396C ABP1P15891 592 aaKnown RBP6.47□□□□□ -1.37
VPS33YLR396C WSC3Q12215 556 aa6.46□□□□□ -1.38
VPS33YLR396C SOL3P38858 249 aa6.45□□□□□ -1.38
VPS33YLR396C DCW1P36091 449 aa6.45□□□□□ -1.38
VPS33YLR396C YGR273CP53329 174 aa6.45□□□□□ -1.38
VPS33YLR396C YBL029C-AQ3E756 94 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms