Protein–RNA interactions for Protein: Q03780

YDR239C, Uncharacterized protein YDR239C, yeastyeast

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YDR239CQ03780 NSR1YGR159C 1245 nt19.08■□□□□ 0.64
YDR239CQ03780 YML009W-BYML009W-B 477 nt18.78■□□□□ 0.6
YDR239CQ03780 NOP1YDL014W 984 nt18.04■□□□□ 0.48
YDR239CQ03780 MDJ1YFL016C 1536 nt17.42■□□□□ 0.38
YDR239CQ03780 YKL036CYKL036C 393 nt16.18■□□□□ 0.18
YDR239CQ03780 YJL027CYJL027C 417 nt16.04■□□□□ 0.16
YDR239CQ03780 SRX1YKL086W 384 nt15.75■□□□□ 0.11
YDR239CQ03780 Q0297Q0297 156 nt15.6■□□□□ 0.09
YDR239CQ03780 DBP2YNL112W 1641 nt15.19■□□□□ 0.02
YDR239CQ03780 YBR190WYBR190W 312 nt14.97□□□□□ -0.01
YDR239CQ03780 YCR051WYCR051W 669 nt14.95□□□□□ -0.02
YDR239CQ03780 SSA3YBL075C 1950 nt14.83□□□□□ -0.04
YDR239CQ03780 RTC3YHR087W 336 nt14.67□□□□□ -0.06
YDR239CQ03780 TRN1tP(UGG)A 72 nt14.51□□□□□ -0.09
YDR239CQ03780 SUF9tP(UGG)F 72 nt14.51□□□□□ -0.09
YDR239CQ03780 SUF8tP(UGG)H 72 nt14.51□□□□□ -0.09
YDR239CQ03780 tP(UGG)LtP(UGG)L 72 nt14.51□□□□□ -0.09
YDR239CQ03780 SUF7tP(UGG)M 72 nt14.51□□□□□ -0.09
YDR239CQ03780 tP(UGG)N1tP(UGG)N1 72 nt14.51□□□□□ -0.09
YDR239CQ03780 tP(UGG)N2tP(UGG)N2 72 nt14.51□□□□□ -0.09
YDR239CQ03780 tP(UGG)O1tP(UGG)O1 72 nt14.51□□□□□ -0.09
YDR239CQ03780 SUF11tP(UGG)O2 72 nt14.51□□□□□ -0.09
YDR239CQ03780 SCS3YGL126W 1143 nt14.45□□□□□ -0.1
YDR239CQ03780 CCC1YLR220W 969 nt14.45□□□□□ -0.1
YDR239CQ03780 RVS167YDR388W 1449 nt14.18□□□□□ -0.14
YDR239CQ03780 YOL085CYOL085C 342 nt14.03□□□□□ -0.16
YDR239CQ03780 RPP1BYDL130W 321 nt14.01□□□□□ -0.17
YDR239CQ03780 PUT4YOR348C 1884 nt13.98□□□□□ -0.17
YDR239CQ03780 SCJ1YMR214W 1134 nt13.97□□□□□ -0.17
YDR239CQ03780 PKP1YIL042C 1185 nt13.92□□□□□ -0.18
YDR239CQ03780 tP(UGG)O3tP(UGG)O3 72 nt13.6□□□□□ -0.23
YDR239CQ03780 ARE1YCR048W 1833 nt13.57□□□□□ -0.24
YDR239CQ03780 SHR5YOL110W 714 nt13.55□□□□□ -0.24
YDR239CQ03780 POA1YBR022W 534 nt13.55□□□□□ -0.24
YDR239CQ03780 URN1YPR152C 1398 nt13.52□□□□□ -0.25
YDR239CQ03780 SAH1YER043C 1350 nt13.48□□□□□ -0.25
YDR239CQ03780 PET122YER153C 765 nt13.46□□□□□ -0.25
YDR239CQ03780 YHR049C-AYHR049C-A 297 nt13.4□□□□□ -0.26
YDR239CQ03780 DEP1YAL013W 1218 nt13.4□□□□□ -0.26
YDR239CQ03780 OPI9YLR338W 858 nt13.4□□□□□ -0.26
YDR239CQ03780 BSC6YOL137W 1494 nt13.34□□□□□ -0.27
YDR239CQ03780 SPT5YML010W 3192 nt13.24□□□□□ -0.29
YDR239CQ03780 SCR1SCR1 522 nt13.19□□□□□ -0.3
YDR239CQ03780 RPN10YHR200W 807 nt13.18□□□□□ -0.3
YDR239CQ03780 SSA4YER103W 1929 nt13.13□□□□□ -0.31
YDR239CQ03780 YDJ1YNL064C 1230 nt13.13□□□□□ -0.31
YDR239CQ03780 BUD23YCR047C 828 nt13.1□□□□□ -0.31
YDR239CQ03780 YNL208WYNL208W 600 nt13.09□□□□□ -0.31
YDR239CQ03780 RRN5YLR141W 1092 nt13.05□□□□□ -0.32
YDR239CQ03780 PUN1YLR414C 792 nt13□□□□□ -0.33
YDR239CQ03780 GAR1YHR089C 618 nt12.97□□□□□ -0.33
YDR239CQ03780 PTC2YER089C 1395 nt12.96□□□□□ -0.33
YDR239CQ03780 YJR018WYJR018W 363 nt12.87□□□□□ -0.35
YDR239CQ03780 NAB2YGL122C 1578 nt12.85□□□□□ -0.35
YDR239CQ03780 ATS1YAL020C 1002 nt12.79□□□□□ -0.36
YDR239CQ03780 YER088W-BYER088W-B 147 nt12.77□□□□□ -0.37
YDR239CQ03780 BDF1YLR399C 2061 nt12.7□□□□□ -0.38
YDR239CQ03780 RSB1YOR049C 1065 nt12.62□□□□□ -0.39
YDR239CQ03780 FPR4YLR449W 1179 nt12.59□□□□□ -0.39
YDR239CQ03780 MEP2YNL142W 1500 nt12.58□□□□□ -0.4
YDR239CQ03780 DAL1YIR027C 1383 nt12.57□□□□□ -0.4
YDR239CQ03780 FIS1YIL065C 468 nt12.56□□□□□ -0.4
YDR239CQ03780 TIR1YER011W 765 nt12.54□□□□□ -0.4
YDR239CQ03780 YJR120WYJR120W 351 nt12.52□□□□□ -0.41
YDR239CQ03780 TAT1YBR069C 1860 nt12.51□□□□□ -0.41
YDR239CQ03780 SSA1YAL005C 1929 nt12.49□□□□□ -0.41
YDR239CQ03780 INM2YDR287W 879 nt12.47□□□□□ -0.41
YDR239CQ03780 RPP2BYDR382W 333 nt12.47□□□□□ -0.41
YDR239CQ03780 PHO4YFR034C 939 nt12.44□□□□□ -0.42
YDR239CQ03780 DCW1YKL046C 1350 nt12.39□□□□□ -0.43
YDR239CQ03780 YPS1YLR120C 1710 nt12.39□□□□□ -0.43
YDR239CQ03780 YHR165W-AYHR165W-A 312 nt12.31□□□□□ -0.44
YDR239CQ03780 Q0182Q0182 405 nt12.28□□□□□ -0.44
YDR239CQ03780 PAC11YDR488C 1602 nt12.28□□□□□ -0.44
YDR239CQ03780 YBL100CYBL100C 315 nt12.26□□□□□ -0.45
YDR239CQ03780 YDR095CYDR095C 411 nt12.21□□□□□ -0.45
YDR239CQ03780 YBR220CYBR220C 1683 nt12.2□□□□□ -0.46
YDR239CQ03780 EMI2YDR516C 1503 nt12.19□□□□□ -0.46
YDR239CQ03780 SRB2YHR041C 633 nt12.18□□□□□ -0.46
YDR239CQ03780 YMR090WYMR090W 684 nt12.16□□□□□ -0.46
YDR239CQ03780 BDH2YAL061W 1254 nt12.12□□□□□ -0.47
YDR239CQ03780 FUN26YAL022C 1554 nt12.1□□□□□ -0.47
YDR239CQ03780 ALF1YNL148C 765 nt12.05□□□□□ -0.48
YDR239CQ03780 YDL221WYDL221W 552 nt12.03□□□□□ -0.48
YDR239CQ03780 SDH1YKL148C 1923 nt12.03□□□□□ -0.48
YDR239CQ03780 CAC2YML102W 1407 nt12.03□□□□□ -0.48
YDR239CQ03780 TRM9YML014W 840 nt12.02□□□□□ -0.49
YDR239CQ03780 RPP2AYOL039W 321 nt12.02□□□□□ -0.49
YDR239CQ03780 PTP1YDL230W 1008 nt12□□□□□ -0.49
YDR239CQ03780 PST2YDR032C 597 nt11.93□□□□□ -0.5
YDR239CQ03780 PCH2YBR186W 1695 nt11.93□□□□□ -0.5
YDR239CQ03780 WWM1YFL010C 636 nt11.92□□□□□ -0.5
YDR239CQ03780 GUT2YIL155C 1950 nt11.88□□□□□ -0.51
YDR239CQ03780 NVJ2YPR091C 2313 nt11.87□□□□□ -0.51
YDR239CQ03780 LSM3YLR438C-A 270 nt11.87□□□□□ -0.51
YDR239CQ03780 CCT6YDR188W 1641 nt11.86□□□□□ -0.51
YDR239CQ03780 SCC4YER147C 1875 nt11.85□□□□□ -0.51
YDR239CQ03780 SEC11YIR022W 504 nt11.85□□□□□ -0.51
YDR239CQ03780 SIS1YNL007C 1059 nt11.85□□□□□ -0.51
YDR239CQ03780 IRC15YPL017C 1500 nt11.82□□□□□ -0.52
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms