Protein–RNA interactions for Protein: P47057

SNX4, Sorting nexin-4, yeastyeast

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX4P47057 NSR1YGR159C 1245 nt16.79■□□□□ 0.28
SNX4P47057 YML009W-BYML009W-B 477 nt16.11■□□□□ 0.17
SNX4P47057 MDJ1YFL016C 1536 nt15.73■□□□□ 0.11
SNX4P47057 NOP1YDL014W 984 nt15.4■□□□□ 0.06
SNX4P47057 SSA3YBL075C 1950 nt14.69□□□□□ -0.06
SNX4P47057 YJL027CYJL027C 417 nt14.46□□□□□ -0.09
SNX4P47057 YBR190WYBR190W 312 nt13.67□□□□□ -0.22
SNX4P47057 YKL036CYKL036C 393 nt13.55□□□□□ -0.24
SNX4P47057 DBP2YNL112W 1641 nt13.53□□□□□ -0.24
SNX4P47057 SRX1YKL086W 384 nt13.39□□□□□ -0.27
SNX4P47057 RTC3YHR087W 336 nt13.33□□□□□ -0.28
SNX4P47057 Q0297Q0297 156 nt13.18□□□□□ -0.3
SNX4P47057 PUT4YOR348C 1884 nt13.07□□□□□ -0.32
SNX4P47057 YCR051WYCR051W 669 nt12.66□□□□□ -0.38
SNX4P47057 POA1YBR022W 534 nt12.6□□□□□ -0.39
SNX4P47057 SSA4YER103W 1929 nt12.6□□□□□ -0.39
SNX4P47057 TRN1tP(UGG)A 72 nt12.59□□□□□ -0.39
SNX4P47057 SUF9tP(UGG)F 72 nt12.59□□□□□ -0.39
SNX4P47057 SUF8tP(UGG)H 72 nt12.59□□□□□ -0.39
SNX4P47057 tP(UGG)LtP(UGG)L 72 nt12.59□□□□□ -0.39
SNX4P47057 SUF7tP(UGG)M 72 nt12.59□□□□□ -0.39
SNX4P47057 tP(UGG)N1tP(UGG)N1 72 nt12.59□□□□□ -0.39
SNX4P47057 tP(UGG)N2tP(UGG)N2 72 nt12.59□□□□□ -0.39
SNX4P47057 tP(UGG)O1tP(UGG)O1 72 nt12.59□□□□□ -0.39
SNX4P47057 SUF11tP(UGG)O2 72 nt12.59□□□□□ -0.39
SNX4P47057 RVS167YDR388W 1449 nt12.59□□□□□ -0.39
SNX4P47057 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
SNX4P47057 SPT5YML010W 3192 nt12.54□□□□□ -0.4
SNX4P47057 BSC6YOL137W 1494 nt12.5□□□□□ -0.41
SNX4P47057 PAC11YDR488C 1602 nt12.5□□□□□ -0.41
SNX4P47057 CCC1YLR220W 969 nt12.48□□□□□ -0.41
SNX4P47057 YHR049C-AYHR049C-A 297 nt12.42□□□□□ -0.42
SNX4P47057 NVJ2YPR091C 2313 nt12.4□□□□□ -0.42
SNX4P47057 SAH1YER043C 1350 nt12.29□□□□□ -0.44
SNX4P47057 FPS1YLL043W 2010 nt12.27□□□□□ -0.44
SNX4P47057 SCJ1YMR214W 1134 nt12.27□□□□□ -0.45
SNX4P47057 SCS3YGL126W 1143 nt12.25□□□□□ -0.45
SNX4P47057 BDF1YLR399C 2061 nt12.18□□□□□ -0.46
SNX4P47057 URN1YPR152C 1398 nt12.14□□□□□ -0.47
SNX4P47057 OPI9YLR338W 858 nt12.13□□□□□ -0.47
SNX4P47057 BUD23YCR047C 828 nt12.08□□□□□ -0.48
SNX4P47057 SSA1YAL005C 1929 nt12.02□□□□□ -0.49
SNX4P47057 TAT1YBR069C 1860 nt12.01□□□□□ -0.49
SNX4P47057 SHR5YOL110W 714 nt11.91□□□□□ -0.5
SNX4P47057 DEP1YAL013W 1218 nt11.87□□□□□ -0.51
SNX4P47057 RPP1BYDL130W 321 nt11.84□□□□□ -0.51
SNX4P47057 MEP2YNL142W 1500 nt11.83□□□□□ -0.52
SNX4P47057 PTC2YER089C 1395 nt11.79□□□□□ -0.52
SNX4P47057 PUN1YLR414C 792 nt11.79□□□□□ -0.52
SNX4P47057 RPN10YHR200W 807 nt11.78□□□□□ -0.52
SNX4P47057 NAB2YGL122C 1578 nt11.77□□□□□ -0.53
SNX4P47057 YOL085CYOL085C 342 nt11.69□□□□□ -0.54
SNX4P47057 tP(UGG)O3tP(UGG)O3 72 nt11.63□□□□□ -0.55
SNX4P47057 DCW1YKL046C 1350 nt11.6□□□□□ -0.55
SNX4P47057 YNL208WYNL208W 600 nt11.6□□□□□ -0.55
SNX4P47057 PKP1YIL042C 1185 nt11.56□□□□□ -0.56
SNX4P47057 YBR220CYBR220C 1683 nt11.52□□□□□ -0.56
SNX4P47057 YJR018WYJR018W 363 nt11.52□□□□□ -0.57
SNX4P47057 FIS1YIL065C 468 nt11.48□□□□□ -0.57
SNX4P47057 YMR090WYMR090W 684 nt11.48□□□□□ -0.57
SNX4P47057 UME6YDR207C 2511 nt11.47□□□□□ -0.57
SNX4P47057 EMI2YDR516C 1503 nt11.44□□□□□ -0.58
SNX4P47057 DAL1YIR027C 1383 nt11.43□□□□□ -0.58
SNX4P47057 YPS1YLR120C 1710 nt11.42□□□□□ -0.58
SNX4P47057 FPR4YLR449W 1179 nt11.4□□□□□ -0.58
SNX4P47057 YHR165W-AYHR165W-A 312 nt11.37□□□□□ -0.59
SNX4P47057 PET122YER153C 765 nt11.35□□□□□ -0.59
SNX4P47057 PCH2YBR186W 1695 nt11.35□□□□□ -0.59
SNX4P47057 PHO4YFR034C 939 nt11.32□□□□□ -0.6
SNX4P47057 SDH1YKL148C 1923 nt11.31□□□□□ -0.6
SNX4P47057 GUT2YIL155C 1950 nt11.31□□□□□ -0.6
SNX4P47057 YDL221WYDL221W 552 nt11.28□□□□□ -0.6
SNX4P47057 SEC11YIR022W 504 nt11.28□□□□□ -0.6
SNX4P47057 YDJ1YNL064C 1230 nt11.26□□□□□ -0.61
SNX4P47057 INM2YDR287W 879 nt11.23□□□□□ -0.61
SNX4P47057 YDR095CYDR095C 411 nt11.21□□□□□ -0.61
SNX4P47057 YJL225CYJL225C 5277 nt11.16□□□□□ -0.62
SNX4P47057 GAR1YHR089C 618 nt11.15□□□□□ -0.62
SNX4P47057 SCR1SCR1 522 nt11.14□□□□□ -0.63
SNX4P47057 SCC4YER147C 1875 nt11.11□□□□□ -0.63
SNX4P47057 YJR120WYJR120W 351 nt11.11□□□□□ -0.63
SNX4P47057 CAC2YML102W 1407 nt11.1□□□□□ -0.63
SNX4P47057 RPP2BYDR382W 333 nt11.07□□□□□ -0.64
SNX4P47057 PIB2YGL023C 1908 nt11.07□□□□□ -0.64
SNX4P47057 PTP1YDL230W 1008 nt11.02□□□□□ -0.65
SNX4P47057 RPP2AYOL039W 321 nt11.01□□□□□ -0.65
SNX4P47057 RTF1YGL244W 1677 nt10.98□□□□□ -0.65
SNX4P47057 YBL100CYBL100C 315 nt10.97□□□□□ -0.65
SNX4P47057 YSC84YHR016C 1407 nt10.96□□□□□ -0.65
SNX4P47057 RRN5YLR141W 1092 nt10.96□□□□□ -0.65
SNX4P47057 ATS1YAL020C 1002 nt10.95□□□□□ -0.66
SNX4P47057 IRC15YPL017C 1500 nt10.94□□□□□ -0.66
SNX4P47057 GIS3YLR094C 1509 nt10.9□□□□□ -0.66
SNX4P47057 BOR1YNL275W 1731 nt10.89□□□□□ -0.67
SNX4P47057 ALF1YNL148C 765 nt10.88□□□□□ -0.67
SNX4P47057 MCH5YOR306C 1566 nt10.88□□□□□ -0.67
SNX4P47057 YHL050CYHL050C 2094 nt10.85□□□□□ -0.67
SNX4P47057 BOP3YNL042W 1191 nt10.85□□□□□ -0.67
SNX4P47057 TIR1YER011W 765 nt10.82□□□□□ -0.68
SNX4P47057 FUN26YAL022C 1554 nt10.81□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms