Protein–RNA interactions for Protein: P32913

VPS17, Vacuolar protein sorting-associated protein 17, yeastyeast

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS17P32913 NSR1YGR159C 1245 nt18.05■□□□□ 0.48
VPS17P32913 YML009W-BYML009W-B 477 nt17.85■□□□□ 0.45
VPS17P32913 NOP1YDL014W 984 nt17.24■□□□□ 0.35
VPS17P32913 MDJ1YFL016C 1536 nt16.35■□□□□ 0.21
VPS17P32913 YKL036CYKL036C 393 nt15.53■□□□□ 0.08
VPS17P32913 YJL027CYJL027C 417 nt15.1■□□□□ 0.01
VPS17P32913 SRX1YKL086W 384 nt15.02■□□□□ -0
VPS17P32913 Q0297Q0297 156 nt14.93□□□□□ -0.02
VPS17P32913 DBP2YNL112W 1641 nt14.26□□□□□ -0.13
VPS17P32913 YCR051WYCR051W 669 nt14.25□□□□□ -0.13
VPS17P32913 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
VPS17P32913 SCS3YGL126W 1143 nt13.92□□□□□ -0.18
VPS17P32913 SSA3YBL075C 1950 nt13.92□□□□□ -0.18
VPS17P32913 TRN1tP(UGG)A 72 nt13.78□□□□□ -0.2
VPS17P32913 SUF9tP(UGG)F 72 nt13.78□□□□□ -0.2
VPS17P32913 SUF8tP(UGG)H 72 nt13.78□□□□□ -0.2
VPS17P32913 tP(UGG)LtP(UGG)L 72 nt13.78□□□□□ -0.2
VPS17P32913 SUF7tP(UGG)M 72 nt13.78□□□□□ -0.2
VPS17P32913 tP(UGG)N1tP(UGG)N1 72 nt13.78□□□□□ -0.2
VPS17P32913 tP(UGG)N2tP(UGG)N2 72 nt13.78□□□□□ -0.2
VPS17P32913 tP(UGG)O1tP(UGG)O1 72 nt13.78□□□□□ -0.2
VPS17P32913 SUF11tP(UGG)O2 72 nt13.78□□□□□ -0.2
VPS17P32913 RTC3YHR087W 336 nt13.76□□□□□ -0.21
VPS17P32913 CCC1YLR220W 969 nt13.67□□□□□ -0.22
VPS17P32913 YOL085CYOL085C 342 nt13.45□□□□□ -0.26
VPS17P32913 RVS167YDR388W 1449 nt13.43□□□□□ -0.26
VPS17P32913 RPP1BYDL130W 321 nt13.41□□□□□ -0.26
VPS17P32913 PKP1YIL042C 1185 nt13.29□□□□□ -0.28
VPS17P32913 SCJ1YMR214W 1134 nt13.21□□□□□ -0.29
VPS17P32913 PUT4YOR348C 1884 nt12.99□□□□□ -0.33
VPS17P32913 tP(UGG)O3tP(UGG)O3 72 nt12.92□□□□□ -0.34
VPS17P32913 SHR5YOL110W 714 nt12.84□□□□□ -0.35
VPS17P32913 PET122YER153C 765 nt12.83□□□□□ -0.36
VPS17P32913 URN1YPR152C 1398 nt12.71□□□□□ -0.37
VPS17P32913 SCR1SCR1 522 nt12.64□□□□□ -0.39
VPS17P32913 ARE1YCR048W 1833 nt12.64□□□□□ -0.39
VPS17P32913 OPI9YLR338W 858 nt12.61□□□□□ -0.39
VPS17P32913 SAH1YER043C 1350 nt12.6□□□□□ -0.39
VPS17P32913 DEP1YAL013W 1218 nt12.6□□□□□ -0.39
VPS17P32913 POA1YBR022W 534 nt12.58□□□□□ -0.4
VPS17P32913 YHR049C-AYHR049C-A 297 nt12.53□□□□□ -0.4
VPS17P32913 YDJ1YNL064C 1230 nt12.52□□□□□ -0.41
VPS17P32913 RPN10YHR200W 807 nt12.49□□□□□ -0.41
VPS17P32913 RRN5YLR141W 1092 nt12.43□□□□□ -0.42
VPS17P32913 YNL208WYNL208W 600 nt12.38□□□□□ -0.43
VPS17P32913 BSC6YOL137W 1494 nt12.38□□□□□ -0.43
VPS17P32913 ATS1YAL020C 1002 nt12.35□□□□□ -0.43
VPS17P32913 GAR1YHR089C 618 nt12.29□□□□□ -0.44
VPS17P32913 Q0182Q0182 405 nt12.27□□□□□ -0.45
VPS17P32913 PUN1YLR414C 792 nt12.26□□□□□ -0.45
VPS17P32913 BUD23YCR047C 828 nt12.24□□□□□ -0.45
VPS17P32913 YER088W-BYER088W-B 147 nt12.17□□□□□ -0.46
VPS17P32913 SPT5YML010W 3192 nt12.15□□□□□ -0.46
VPS17P32913 PTC2YER089C 1395 nt12.15□□□□□ -0.46
VPS17P32913 YJR018WYJR018W 363 nt12.12□□□□□ -0.47
VPS17P32913 RSB1YOR049C 1065 nt12.09□□□□□ -0.47
VPS17P32913 SSA4YER103W 1929 nt12.09□□□□□ -0.47
VPS17P32913 NAB2YGL122C 1578 nt12.05□□□□□ -0.48
VPS17P32913 SSA1YAL005C 1929 nt11.98□□□□□ -0.49
VPS17P32913 TIR1YER011W 765 nt11.9□□□□□ -0.5
VPS17P32913 DAL1YIR027C 1383 nt11.82□□□□□ -0.52
VPS17P32913 FPR4YLR449W 1179 nt11.81□□□□□ -0.52
VPS17P32913 RPP2BYDR382W 333 nt11.8□□□□□ -0.52
VPS17P32913 FIS1YIL065C 468 nt11.8□□□□□ -0.52
VPS17P32913 YJR120WYJR120W 351 nt11.79□□□□□ -0.52
VPS17P32913 BDF1YLR399C 2061 nt11.78□□□□□ -0.52
VPS17P32913 INM2YDR287W 879 nt11.75□□□□□ -0.53
VPS17P32913 PHO4YFR034C 939 nt11.7□□□□□ -0.54
VPS17P32913 MEP2YNL142W 1500 nt11.65□□□□□ -0.54
VPS17P32913 PAC11YDR488C 1602 nt11.62□□□□□ -0.55
VPS17P32913 YPS1YLR120C 1710 nt11.58□□□□□ -0.56
VPS17P32913 TAT1YBR069C 1860 nt11.57□□□□□ -0.56
VPS17P32913 YBL100CYBL100C 315 nt11.56□□□□□ -0.56
VPS17P32913 FPS1YLL043W 2010 nt11.53□□□□□ -0.56
VPS17P32913 YHR165W-AYHR165W-A 312 nt11.52□□□□□ -0.57
VPS17P32913 PST2YDR032C 597 nt11.49□□□□□ -0.57
VPS17P32913 SRB2YHR041C 633 nt11.49□□□□□ -0.57
VPS17P32913 BDH2YAL061W 1254 nt11.47□□□□□ -0.57
VPS17P32913 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
VPS17P32913 DCW1YKL046C 1350 nt11.45□□□□□ -0.58
VPS17P32913 NVJ2YPR091C 2313 nt11.42□□□□□ -0.58
VPS17P32913 FUN26YAL022C 1554 nt11.41□□□□□ -0.58
VPS17P32913 ALF1YNL148C 765 nt11.36□□□□□ -0.59
VPS17P32913 MOT3YMR070W 1473 nt11.34□□□□□ -0.59
VPS17P32913 TRM9YML014W 840 nt11.34□□□□□ -0.59
VPS17P32913 YMR090WYMR090W 684 nt11.33□□□□□ -0.6
VPS17P32913 EMI2YDR516C 1503 nt11.32□□□□□ -0.6
VPS17P32913 WWM1YFL010C 636 nt11.3□□□□□ -0.6
VPS17P32913 LSM3YLR438C-A 270 nt11.27□□□□□ -0.61
VPS17P32913 RPP2AYOL039W 321 nt11.26□□□□□ -0.61
VPS17P32913 YDL221WYDL221W 552 nt11.21□□□□□ -0.61
VPS17P32913 PTP1YDL230W 1008 nt11.21□□□□□ -0.61
VPS17P32913 CCT6YDR188W 1641 nt11.2□□□□□ -0.62
VPS17P32913 YBR220CYBR220C 1683 nt11.2□□□□□ -0.62
VPS17P32913 SUF2tP(AGG)C 72 nt11.19□□□□□ -0.62
VPS17P32913 SUF10tP(AGG)N 72 nt11.19□□□□□ -0.62
VPS17P32913 CAC2YML102W 1407 nt11.18□□□□□ -0.62
VPS17P32913 YGR021WYGR021W 873 nt11.16□□□□□ -0.62
VPS17P32913 YFL021C-AYFL021C-A 855 nt11.15□□□□□ -0.62
VPS17P32913 SIS1YNL007C 1059 nt11.14□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 7.4 ms