RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	PCF11	P39081	626 aa	Predicted RBP	2.29	□□□□□ -2.04
SHE9	YDR393W	ESL1	P40456	1118 aa		2.29	□□□□□ -2.04
SHE9	YDR393W	EGT2	P42835	1041 aa		2.29	□□□□□ -2.04
SHE9	YDR393W	RMD8	P43620	662 aa		2.29	□□□□□ -2.04
SHE9	YDR393W	SFH5	P47008	294 aa		2.29	□□□□□ -2.04
SHE9	YDR393W	YIP5	P53108	310 aa		2.29	□□□□□ -2.04
SHE9	YDR393W	SNU66	Q12420	587 aa	Predicted RBP	2.29	□□□□□ -2.04
SHE9	YDR393W	RIP1	P08067	215 aa		2.28	□□□□□ -2.04
SHE9	YDR393W	SPS4	P09937	338 aa		2.28	□□□□□ -2.04
SHE9	YDR393W	MRPL27	P36526	146 aa	Predicted RBP	2.28	□□□□□ -2.04
SHE9	YDR393W	VTC2	P43585	828 aa		2.28	□□□□□ -2.04
SHE9	YDR393W	RPT6	Q01939	405 aa	Known RBP	2.28	□□□□□ -2.04
SHE9	YDR393W	REX4	Q08237	289 aa		2.28	□□□□□ -2.04
SHE9	YDR393W	YGK3	Q12222	375 aa	Predicted RBP	2.28	□□□□□ -2.04
SHE9	YDR393W	HIR3	P47171	1648 aa		2.28	□□□□□ -2.04
SHE9	YDR393W	THO2	P53552	1597 aa	Known RBP	2.27	□□□□□ -2.05
SHE9	YDR393W	PTI1	P39927	425 aa	Predicted RBP	2.27	□□□□□ -2.05
SHE9	YDR393W	SEC9	P40357	651 aa		2.27	□□□□□ -2.05
SHE9	YDR393W	YFL012W	P43580	148 aa		2.27	□□□□□ -2.05
SHE9	YDR393W	YPL107W	Q02873	248 aa		2.27	□□□□□ -2.05
SHE9	YDR393W	RTN1	Q04947	295 aa	Known RBP	2.27	□□□□□ -2.05
SHE9	YDR393W	SLF1	Q12034	447 aa	Known RBP	2.27	□□□□□ -2.05
SHE9	YDR393W	PEP1	P32319	1579 aa		2.27	□□□□□ -2.05
SHE9	YDR393W	GPH1	P06738	902 aa	Known RBP	2.26	□□□□□ -2.05
SHE9	YDR393W	OCA4	P25366	362 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	TPS2	P31688	896 aa	Known RBP	2.26	□□□□□ -2.05
SHE9	YDR393W	PMT1	P33775	817 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	CMC1	P36064	111 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	RFC3	P38629	340 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	PHB2	P50085	310 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	MST27	P53176	234 aa		2.26	□□□□□ -2.05
SHE9	YDR393W	VHC1	P38329	1120 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	HXT14	P42833	540 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	YJR011C	P47086	261 aa	Predicted RBP	2.25	□□□□□ -2.05
SHE9	YDR393W	MRM2	P53123	320 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	SVL3	Q03088	825 aa	Known RBP	2.25	□□□□□ -2.05
SHE9	YDR393W	GIR2	Q03768	265 aa	Predicted RBP	2.25	□□□□□ -2.05
SHE9	YDR393W	MCH1	Q07376	486 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	SRL2	Q12020	392 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	ATG29	Q12092	213 aa		2.25	□□□□□ -2.05
SHE9	YDR393W	SKI3	P17883	1432 aa	Known RBP	2.25	□□□□□ -2.05
SHE9	YDR393W	BNI1	P41832	1953 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	IMP2'	P32351	346 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	PHA2	P32452	334 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	ZUO1	P32527	433 aa	Known RBP	2.24	□□□□□ -2.05
SHE9	YDR393W	ANR2	P36090	516 aa	Predicted RBP	2.24	□□□□□ -2.05
SHE9	YDR393W	PRY2	P36110	329 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	GPI15	P53961	229 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	KTR6	P54070	446 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	OAZ1	Q02803	292 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	MMS1	Q06211	1407 aa		2.24	□□□□□ -2.05
SHE9	YDR393W	MET8	P15807	274 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	SPO7	P18410	259 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	PFF1	P38244	976 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	STP2	P38704	541 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	COX14	P39103	70 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	YER184C	P39961	794 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	ARF3	P40994	183 aa	RIP-Chip data	2.23	□□□□□ -2.05	not detected
SHE9	YDR393W	IMH1	Q06704	911 aa	Known RBP	2.23	□□□□□ -2.05
SHE9	YDR393W	RAX1	Q08760	435 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	FOL3	Q12676	427 aa	Predicted RBP	2.23	□□□□□ -2.05
SHE9	YDR393W	XRN1	P22147	1528 aa	Known RBP	2.23	□□□□□ -2.05
SHE9	YDR393W	YCF1	P39109	1515 aa	Known RBP	2.23	□□□□□ -2.05
SHE9	YDR393W	SPO22	P40511	975 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	YPR195C	Q06594	109 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	RIM20	Q12033	661 aa		2.23	□□□□□ -2.05
SHE9	YDR393W	LTE1	P07866	1435 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	CLN1	P20437	546 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	SIN4	P32259	974 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	HOT1	Q03213	719 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	MDM30	Q05930	598 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	YDL121C	Q07541	149 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	MFG1	Q07684	458 aa		2.22	□□□□□ -2.05
SHE9	YDR393W	ARG3	P05150	338 aa		2.21	□□□□□ -2.06
SHE9	YDR393W	ECT1	P33412	323 aa		2.21	□□□□□ -2.06
SHE9	YDR393W	RRP1	P35178	278 aa	Predicted RBP	2.21	□□□□□ -2.06
SHE9	YDR393W	MDM36	Q06820	579 aa		2.21	□□□□□ -2.06
SHE9	YDR393W	MED1	Q12321	566 aa		2.21	□□□□□ -2.06
SHE9	YDR393W	CDC25	P04821	1589 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	MET5	P47169	1442 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	MRP7	P12687	371 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	ZRC1	P20107	442 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	PPH22	P23595	377 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	YCL068C	P25593	260 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	UTP9	P38882	575 aa	Known RBP	2.2	□□□□□ -2.06
SHE9	YDR393W	YAL037W	P39728	267 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	LCB3	P47013	409 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	TPT1	Q12272	230 aa	Known RBP	2.2	□□□□□ -2.06
SHE9	YDR393W	YDR061W	Q12298	539 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	NAG1	Q8TGN9	163 aa		2.2	□□□□□ -2.06
SHE9	YDR393W	ATG2	P53855	1592 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	GPI10	P30777	616 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	CYM1	P32898	989 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	OTU2	P38747	307 aa	Known RBP	2.19	□□□□□ -2.06
SHE9	YDR393W	WSS1	P38838	269 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	MET18	P40469	1032 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	IGD1	P43598	195 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	SKI8	Q02793	397 aa	Predicted RBP	2.19	□□□□□ -2.06
SHE9	YDR393W	YMR102C	Q03177	834 aa		2.19	□□□□□ -2.06
SHE9	YDR393W	RQC1	Q05468	723 aa	Known RBP	2.19	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms