Protein–RNA interactions for Protein: P38244

PFF1, Vacuolar membrane protease, yeastyeast

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PFF1P38244 YML009W-BYML009W-B 477 nt25.3■■□□□ 1.64
PFF1P38244 NOP1YDL014W 984 nt24.8■■□□□ 1.56
PFF1P38244 NSR1YGR159C 1245 nt24.53■■□□□ 1.52
PFF1P38244 YKL036CYKL036C 393 nt23.46■■□□□ 1.35
PFF1P38244 YJL027CYJL027C 417 nt22.05■■□□□ 1.12
PFF1P38244 Q0297Q0297 156 nt21.88■■□□□ 1.09
PFF1P38244 SCS3YGL126W 1143 nt21.66■■□□□ 1.06
PFF1P38244 SRX1YKL086W 384 nt21.66■■□□□ 1.06
PFF1P38244 MDJ1YFL016C 1536 nt21.25■□□□□ 0.99
PFF1P38244 YCR051WYCR051W 669 nt20.66■□□□□ 0.9
PFF1P38244 YOL085CYOL085C 342 nt20.29■□□□□ 0.84
PFF1P38244 PKP1YIL042C 1185 nt19.97■□□□□ 0.79
PFF1P38244 SCJ1YMR214W 1134 nt19.9■□□□□ 0.78
PFF1P38244 RPP1BYDL130W 321 nt19.65■□□□□ 0.74
PFF1P38244 ATS1YAL020C 1002 nt19.54■□□□□ 0.72
PFF1P38244 TRN1tP(UGG)A 72 nt19.21■□□□□ 0.67
PFF1P38244 SUF9tP(UGG)F 72 nt19.21■□□□□ 0.67
PFF1P38244 SUF8tP(UGG)H 72 nt19.21■□□□□ 0.67
PFF1P38244 tP(UGG)LtP(UGG)L 72 nt19.21■□□□□ 0.67
PFF1P38244 SUF7tP(UGG)M 72 nt19.21■□□□□ 0.67
PFF1P38244 tP(UGG)N1tP(UGG)N1 72 nt19.21■□□□□ 0.67
PFF1P38244 tP(UGG)N2tP(UGG)N2 72 nt19.21■□□□□ 0.67
PFF1P38244 tP(UGG)O1tP(UGG)O1 72 nt19.21■□□□□ 0.67
PFF1P38244 SUF11tP(UGG)O2 72 nt19.21■□□□□ 0.67
PFF1P38244 CCC1YLR220W 969 nt19.12■□□□□ 0.65
PFF1P38244 DBP2YNL112W 1641 nt18.99■□□□□ 0.63
PFF1P38244 PET122YER153C 765 nt18.72■□□□□ 0.59
PFF1P38244 SCR1SCR1 522 nt18.71■□□□□ 0.59
PFF1P38244 tP(UGG)O3tP(UGG)O3 72 nt18.4■□□□□ 0.54
PFF1P38244 RRN5YLR141W 1092 nt18.26■□□□□ 0.51
PFF1P38244 RTC3YHR087W 336 nt18.19■□□□□ 0.5
PFF1P38244 RSB1YOR049C 1065 nt18.09■□□□□ 0.49
PFF1P38244 RVS167YDR388W 1449 nt18.06■□□□□ 0.48
PFF1P38244 PST2YDR032C 597 nt17.97■□□□□ 0.47
PFF1P38244 YBR190WYBR190W 312 nt17.92■□□□□ 0.46
PFF1P38244 YER088W-BYER088W-B 147 nt17.88■□□□□ 0.45
PFF1P38244 YDJ1YNL064C 1230 nt17.76■□□□□ 0.43
PFF1P38244 YKL097CYKL097C 411 nt17.63■□□□□ 0.41
PFF1P38244 SHR5YOL110W 714 nt17.54■□□□□ 0.4
PFF1P38244 GAR1YHR089C 618 nt17.34■□□□□ 0.37
PFF1P38244 SHU1YHL006C 453 nt17.12■□□□□ 0.33
PFF1P38244 DEP1YAL013W 1218 nt16.91■□□□□ 0.3
PFF1P38244 YOR139CYOR139C 393 nt16.78■□□□□ 0.28
PFF1P38244 YAL037C-BYAL037C-B 975 nt16.72■□□□□ 0.27
PFF1P38244 URN1YPR152C 1398 nt16.7■□□□□ 0.26
PFF1P38244 TIR1YER011W 765 nt16.7■□□□□ 0.26
PFF1P38244 YNL208WYNL208W 600 nt16.66■□□□□ 0.26
PFF1P38244 RPN10YHR200W 807 nt16.6■□□□□ 0.25
PFF1P38244 NPL3YDR432W 1245 nt16.55■□□□□ 0.24
PFF1P38244 SSA1YAL005C 1929 nt16.36■□□□□ 0.21
PFF1P38244 OPI9YLR338W 858 nt16.3■□□□□ 0.2
PFF1P38244 SRB2YHR041C 633 nt16.19■□□□□ 0.18
PFF1P38244 MNP1YGL068W 585 nt16.17■□□□□ 0.18
PFF1P38244 YGR021WYGR021W 873 nt16.15■□□□□ 0.18
PFF1P38244 HOM6YJR139C 1080 nt16.11■□□□□ 0.17
PFF1P38244 YOL037CYOL037C 354 nt16.11■□□□□ 0.17
PFF1P38244 WWM1YFL010C 636 nt16.09■□□□□ 0.17
PFF1P38244 tM(CAU)CtM(CAU)C 72 nt16.08■□□□□ 0.16
PFF1P38244 IMT4tM(CAU)E 72 nt16.08■□□□□ 0.16
PFF1P38244 IMT3tM(CAU)J3 72 nt16.08■□□□□ 0.16
PFF1P38244 IMT1tM(CAU)O1 72 nt16.08■□□□□ 0.16
PFF1P38244 IMT2tM(CAU)P 72 nt16.08■□□□□ 0.16
PFF1P38244 SAH1YER043C 1350 nt16.07■□□□□ 0.16
PFF1P38244 YJR018WYJR018W 363 nt15.98■□□□□ 0.15
PFF1P38244 RKM5YLR137W 1104 nt15.89■□□□□ 0.13
PFF1P38244 PUN1YLR414C 792 nt15.86■□□□□ 0.13
PFF1P38244 RPP2BYDR382W 333 nt15.83■□□□□ 0.12
PFF1P38244 YJR120WYJR120W 351 nt15.8■□□□□ 0.12
PFF1P38244 YFL021C-AYFL021C-A 855 nt15.79■□□□□ 0.12
PFF1P38244 PUS2YGL063W 1113 nt15.79■□□□□ 0.12
PFF1P38244 PUT4YOR348C 1884 nt15.76■□□□□ 0.11
PFF1P38244 MOT3YMR070W 1473 nt15.71■□□□□ 0.1
PFF1P38244 ARE1YCR048W 1833 nt15.68■□□□□ 0.1
PFF1P38244 YLR281CYLR281C 468 nt15.68■□□□□ 0.1
PFF1P38244 BSC6YOL137W 1494 nt15.62■□□□□ 0.09
PFF1P38244 BDH2YAL061W 1254 nt15.59■□□□□ 0.09
PFF1P38244 WHI5YOR083W 888 nt15.57■□□□□ 0.08
PFF1P38244 PTC2YER089C 1395 nt15.57■□□□□ 0.08
PFF1P38244 SSA3YBL075C 1950 nt15.53■□□□□ 0.08
PFF1P38244 YHR049C-AYHR049C-A 297 nt15.53■□□□□ 0.08
PFF1P38244 LSM3YLR438C-A 270 nt15.49■□□□□ 0.07
PFF1P38244 FMP45YDL222C 930 nt15.4■□□□□ 0.06
PFF1P38244 POA1YBR022W 534 nt15.39■□□□□ 0.05
PFF1P38244 INM2YDR287W 879 nt15.31■□□□□ 0.04
PFF1P38244 DSK2YMR276W 1122 nt15.31■□□□□ 0.04
PFF1P38244 YPR011CYPR011C 981 nt15.29■□□□□ 0.04
PFF1P38244 BUD23YCR047C 828 nt15.28■□□□□ 0.04
PFF1P38244 YBL100CYBL100C 315 nt15.28■□□□□ 0.04
PFF1P38244 MRPL8YJL063C 717 nt15.27■□□□□ 0.04
PFF1P38244 NAB2YGL122C 1578 nt15.25■□□□□ 0.03
PFF1P38244 YCH1YGR203W 447 nt15.25■□□□□ 0.03
PFF1P38244 FPR4YLR449W 1179 nt15.24■□□□□ 0.03
PFF1P38244 TRM9YML014W 840 nt15.23■□□□□ 0.03
PFF1P38244 YLR236CYLR236C 324 nt15.22■□□□□ 0.03
PFF1P38244 IMP2'YIL154C 1041 nt15.2■□□□□ 0.02
PFF1P38244 DAL1YIR027C 1383 nt15.18■□□□□ 0.02
PFF1P38244 YLR154C-GYLR154C-G 150 nt15.12■□□□□ 0.01
PFF1P38244 FUN26YAL022C 1554 nt15.11■□□□□ 0.01
PFF1P38244 FIS1YIL065C 468 nt15.07■□□□□ 0
PFF1P38244 ADO1YJR105W 1023 nt15.07■□□□□ 0
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms