RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W MRD1Q06106 887 aaKnown RBP1.88□□□□□ -2.11
HIT1YJR055W NOP58Q12499 511 aaKnown RBP1.88□□□□□ -2.11
HIT1YJR055W YBR126W-AQ8TGU7 68 aa1.88□□□□□ -2.11
HIT1YJR055W NTE1Q04958 1679 aa1.87□□□□□ -2.11
HIT1YJR055W CYC3P06182 269 aa1.87□□□□□ -2.11
HIT1YJR055W PRB1P09232 635 aa1.87□□□□□ -2.11
HIT1YJR055W PRD1P25375 712 aa1.87□□□□□ -2.11
HIT1YJR055W POP5P28005 173 aa1.87□□□□□ -2.11
HIT1YJR055W ITR1P30605 584 aa1.87□□□□□ -2.11
HIT1YJR055W SSH4P32343 579 aa1.87□□□□□ -2.11
HIT1YJR055W KAR9P32526 644 aa1.87□□□□□ -2.11
HIT1YJR055W FUI1P38196 639 aa1.87□□□□□ -2.11
HIT1YJR055W SGN1P40561 250 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
HIT1YJR055W OCA1P50946 238 aaPredicted RBP1.87□□□□□ -2.11
HIT1YJR055W VHS1Q03785 461 aa1.87□□□□□ -2.11
HIT1YJR055W PKH2Q12236 1081 aaKnown RBP1.87□□□□□ -2.11
HIT1YJR055W RRD2Q12461 358 aa1.87□□□□□ -2.11
HIT1YJR055W ENT1Q12518 454 aa1.87□□□□□ -2.11
HIT1YJR055W GFD2P25370 566 aaKnown RBP1.86□□□□□ -2.11
HIT1YJR055W NPL6P32832 435 aa1.86□□□□□ -2.11
HIT1YJR055W CBP4P37267 147 aa1.86□□□□□ -2.11
HIT1YJR055W AIM10P39965 576 aaKnown RBP1.86□□□□□ -2.11
HIT1YJR055W YIP1P53039 248 aa1.86□□□□□ -2.11
HIT1YJR055W DUO1P53168 247 aaKnown RBP1.86□□□□□ -2.11
HIT1YJR055W YML131WQ03102 365 aa1.86□□□□□ -2.11
HIT1YJR055W YMR181CQ03231 154 aa1.86□□□□□ -2.11
HIT1YJR055W TIM18Q08749 192 aa1.86□□□□□ -2.11
HIT1YJR055W HUA2Q12134 243 aa1.86□□□□□ -2.11
HIT1YJR055W XRN1P22147 1528 aaKnown RBP1.86□□□□□ -2.11
HIT1YJR055W CCH1P50077 2039 aa1.85□□□□□ -2.11
HIT1YJR055W WBP1P33767 430 aaKnown RBP1.85□□□□□ -2.11
HIT1YJR055W SEO1P39709 593 aa1.85□□□□□ -2.11
HIT1YJR055W PCP1P53259 346 aa1.85□□□□□ -2.11
HIT1YJR055W CAF130P53280 1122 aaPredicted RBP1.85□□□□□ -2.11
HIT1YJR055W PDS5Q04264 1277 aa1.85□□□□□ -2.11
HIT1YJR055W YPQ1Q12010 308 aa1.85□□□□□ -2.11
HIT1YJR055W NMD4Q12129 218 aa1.85□□□□□ -2.11
HIT1YJR055W YPR022CQ12139 1133 aa1.85□□□□□ -2.11
HIT1YJR055W PDR15Q04182 1529 aaKnown RBP1.85□□□□□ -2.11
HIT1YJR055W YRF1-1P0CX20 1796 aa1.85□□□□□ -2.11
HIT1YJR055W YRF1-5P0CX21 1796 aa1.85□□□□□ -2.11
HIT1YJR055W YRF1-8P0CX22 1796 aa1.85□□□□□ -2.11
HIT1YJR055W TY1B-BRQ12193 1756 aa1.85□□□□□ -2.11
HIT1YJR055W TY1B-GR3Q12316 1755 aa1.85□□□□□ -2.11
HIT1YJR055W TY1B-ORQ92393 1755 aa1.85□□□□□ -2.11
HIT1YJR055W DRS2P39524 1355 aa1.85□□□□□ -2.11
HIT1YJR055W CHD1P32657 1468 aa1.84□□□□□ -2.11
HIT1YJR055W RPL31BP0C2H9 113 aaKnown RBP1.84□□□□□ -2.11
HIT1YJR055W SLY1P22213 666 aa1.84□□□□□ -2.11
HIT1YJR055W CSE2P33308 149 aa1.84□□□□□ -2.11
HIT1YJR055W CHK1P38147 527 aa1.84□□□□□ -2.11
HIT1YJR055W FLC2P39719 783 aa1.84□□□□□ -2.11
HIT1YJR055W CHS6P40955 746 aa1.84□□□□□ -2.11
HIT1YJR055W YDR239CQ03780 787 aa1.84□□□□□ -2.11
HIT1YJR055W ECM11Q04110 302 aa1.84□□□□□ -2.11
HIT1YJR055W SNX3Q08826 162 aaKnown RBP1.84□□□□□ -2.11
HIT1YJR055W PLP2Q12017 286 aa1.84□□□□□ -2.11
HIT1YJR055W GAL80P04387 435 aa1.83□□□□□ -2.12
HIT1YJR055W CDC16P09798 840 aa1.83□□□□□ -2.12
HIT1YJR055W PEP3P27801 918 aa1.83□□□□□ -2.12
HIT1YJR055W MUD1P32605 298 aaKnown RBP1.83□□□□□ -2.12
HIT1YJR055W REG2P38232 338 aa1.83□□□□□ -2.12
HIT1YJR055W MIG3P39943 394 aa1.83□□□□□ -2.12
HIT1YJR055W VID27P40157 782 aa1.83□□□□□ -2.12
HIT1YJR055W YPR091CQ06833 770 aa1.83□□□□□ -2.12
HIT1YJR055W YPS3Q12303 508 aa1.83□□□□□ -2.12
HIT1YJR055W AHC1Q12433 566 aa1.83□□□□□ -2.12
HIT1YJR055W AVL9Q12500 764 aa1.83□□□□□ -2.12
HIT1YJR055W YJR112W-AQ3E743 109 aa1.83□□□□□ -2.12
HIT1YJR055W UFD4P33202 1483 aa1.82□□□□□ -2.12
HIT1YJR055W MRPS9P38120 278 aa1.82□□□□□ -2.12
HIT1YJR055W DFG10P40526 253 aa1.82□□□□□ -2.12
HIT1YJR055W YGL108CP53139 140 aa1.82□□□□□ -2.12
HIT1YJR055W RFM1Q12192 310 aa1.82□□□□□ -2.12
HIT1YJR055W YDL007C-AQ2V2Q0 85 aa1.82□□□□□ -2.12
HIT1YJR055W DOP1Q03921 1698 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-LR1P0C2J3 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-FP0CX63 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-GR2P0CX64 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-CP25384 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-DR2Q03494 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY1B-DR1Q03855 1755 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-DR3Q07791 1770 aaKnown RBP1.82□□□□□ -2.12
HIT1YJR055W TY2B-OR1Q12113 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-DR1Q12472 1770 aa1.82□□□□□ -2.12
HIT1YJR055W TY2B-OR2Q12501 1770 aa1.82□□□□□ -2.12
HIT1YJR055W SKI3P17883 1432 aaKnown RBP1.82□□□□□ -2.12
HIT1YJR055W VPS15P22219 1454 aa1.82□□□□□ -2.12
HIT1YJR055W ESP1Q03018 1630 aa1.81□□□□□ -2.12
HIT1YJR055W ATP10P18496 279 aa1.81□□□□□ -2.12
HIT1YJR055W MCM10P32354 571 aa1.81□□□□□ -2.12
HIT1YJR055W THI2P38141 450 aa1.81□□□□□ -2.12
HIT1YJR055W NCS2P53923 493 aaPredicted RBP1.81□□□□□ -2.12
HIT1YJR055W SUB1P54000 292 aaKnown RBP1.81□□□□□ -2.12
HIT1YJR055W OPY2Q06810 360 aa1.81□□□□□ -2.12
HIT1YJR055W PSK1P31374 1356 aa1.81□□□□□ -2.12
HIT1YJR055W TOM1Q03280 3268 aa1.8□□□□□ -2.12
HIT1YJR055W TOP1P04786 769 aa1.8□□□□□ -2.12
HIT1YJR055W ECM25P32525 599 aa1.8□□□□□ -2.12
HIT1YJR055W ARA1P38115 344 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms