Protein–RNA interactions for Protein: P33308

CSE2, Mediator of RNA polymerase II transcription subunit 9, yeastyeast

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CSE2P33308 YML009W-BYML009W-B 477 nt22.04■■□□□ 1.12
CSE2P33308 NSR1YGR159C 1245 nt21.65■■□□□ 1.06
CSE2P33308 NOP1YDL014W 984 nt21.56■■□□□ 1.04
CSE2P33308 YKL036CYKL036C 393 nt20.21■□□□□ 0.83
CSE2P33308 Q0297Q0297 156 nt19.02■□□□□ 0.64
CSE2P33308 YJL027CYJL027C 417 nt18.91■□□□□ 0.62
CSE2P33308 MDJ1YFL016C 1536 nt18.9■□□□□ 0.62
CSE2P33308 SRX1YKL086W 384 nt18.87■□□□□ 0.61
CSE2P33308 SCS3YGL126W 1143 nt18.57■□□□□ 0.56
CSE2P33308 YCR051WYCR051W 669 nt17.89■□□□□ 0.45
CSE2P33308 YOL085CYOL085C 342 nt17.5■□□□□ 0.39
CSE2P33308 PKP1YIL042C 1185 nt17.17■□□□□ 0.34
CSE2P33308 RPP1BYDL130W 321 nt17.05■□□□□ 0.32
CSE2P33308 DBP2YNL112W 1641 nt16.9■□□□□ 0.3
CSE2P33308 TRN1tP(UGG)A 72 nt16.88■□□□□ 0.29
CSE2P33308 SUF9tP(UGG)F 72 nt16.88■□□□□ 0.29
CSE2P33308 SUF8tP(UGG)H 72 nt16.88■□□□□ 0.29
CSE2P33308 tP(UGG)LtP(UGG)L 72 nt16.88■□□□□ 0.29
CSE2P33308 SUF7tP(UGG)M 72 nt16.88■□□□□ 0.29
CSE2P33308 tP(UGG)N1tP(UGG)N1 72 nt16.88■□□□□ 0.29
CSE2P33308 tP(UGG)N2tP(UGG)N2 72 nt16.88■□□□□ 0.29
CSE2P33308 tP(UGG)O1tP(UGG)O1 72 nt16.88■□□□□ 0.29
CSE2P33308 SUF11tP(UGG)O2 72 nt16.88■□□□□ 0.29
CSE2P33308 SCJ1YMR214W 1134 nt16.87■□□□□ 0.29
CSE2P33308 ATS1YAL020C 1002 nt16.7■□□□□ 0.26
CSE2P33308 CCC1YLR220W 969 nt16.66■□□□□ 0.26
CSE2P33308 PET122YER153C 765 nt16.25■□□□□ 0.19
CSE2P33308 SCR1SCR1 522 nt16.14■□□□□ 0.17
CSE2P33308 tP(UGG)O3tP(UGG)O3 72 nt16.06■□□□□ 0.16
CSE2P33308 YBR190WYBR190W 312 nt16.05■□□□□ 0.16
CSE2P33308 RVS167YDR388W 1449 nt15.91■□□□□ 0.14
CSE2P33308 RRN5YLR141W 1092 nt15.81■□□□□ 0.12
CSE2P33308 RTC3YHR087W 336 nt15.67■□□□□ 0.1
CSE2P33308 RSB1YOR049C 1065 nt15.56■□□□□ 0.08
CSE2P33308 YDJ1YNL064C 1230 nt15.55■□□□□ 0.08
CSE2P33308 YER088W-BYER088W-B 147 nt15.51■□□□□ 0.07
CSE2P33308 SHR5YOL110W 714 nt15.46■□□□□ 0.07
CSE2P33308 PST2YDR032C 597 nt15.43■□□□□ 0.06
CSE2P33308 GAR1YHR089C 618 nt15.11■□□□□ 0.01
CSE2P33308 YKL097CYKL097C 411 nt14.96□□□□□ -0.01
CSE2P33308 DEP1YAL013W 1218 nt14.88□□□□□ -0.03
CSE2P33308 URN1YPR152C 1398 nt14.81□□□□□ -0.04
CSE2P33308 SHU1YHL006C 453 nt14.72□□□□□ -0.05
CSE2P33308 YNL208WYNL208W 600 nt14.71□□□□□ -0.05
CSE2P33308 RPN10YHR200W 807 nt14.66□□□□□ -0.06
CSE2P33308 TIR1YER011W 765 nt14.61□□□□□ -0.07
CSE2P33308 OPI9YLR338W 858 nt14.56□□□□□ -0.08
CSE2P33308 SSA1YAL005C 1929 nt14.39□□□□□ -0.11
CSE2P33308 YAL037C-BYAL037C-B 975 nt14.37□□□□□ -0.11
CSE2P33308 SAH1YER043C 1350 nt14.36□□□□□ -0.11
CSE2P33308 PUT4YOR348C 1884 nt14.34□□□□□ -0.11
CSE2P33308 YOR139CYOR139C 393 nt14.33□□□□□ -0.12
CSE2P33308 SRB2YHR041C 633 nt14.22□□□□□ -0.13
CSE2P33308 ARE1YCR048W 1833 nt14.18□□□□□ -0.14
CSE2P33308 YJR018WYJR018W 363 nt14.16□□□□□ -0.14
CSE2P33308 PUN1YLR414C 792 nt14.12□□□□□ -0.15
CSE2P33308 NPL3YDR432W 1245 nt14.09□□□□□ -0.15
CSE2P33308 YJR120WYJR120W 351 nt14.06□□□□□ -0.16
CSE2P33308 YGR021WYGR021W 873 nt14.04□□□□□ -0.16
CSE2P33308 WWM1YFL010C 636 nt14.03□□□□□ -0.16
CSE2P33308 HOM6YJR139C 1080 nt14.02□□□□□ -0.17
CSE2P33308 MNP1YGL068W 585 nt13.99□□□□□ -0.17
CSE2P33308 YHR049C-AYHR049C-A 297 nt13.97□□□□□ -0.17
CSE2P33308 RPP2BYDR382W 333 nt13.94□□□□□ -0.18
CSE2P33308 YOL037CYOL037C 354 nt13.89□□□□□ -0.19
CSE2P33308 POA1YBR022W 534 nt13.89□□□□□ -0.19
CSE2P33308 PTC2YER089C 1395 nt13.88□□□□□ -0.19
CSE2P33308 SSA3YBL075C 1950 nt13.82□□□□□ -0.2
CSE2P33308 RKM5YLR137W 1104 nt13.81□□□□□ -0.2
CSE2P33308 YFL021C-AYFL021C-A 855 nt13.8□□□□□ -0.2
CSE2P33308 tM(CAU)CtM(CAU)C 72 nt13.75□□□□□ -0.21
CSE2P33308 IMT4tM(CAU)E 72 nt13.75□□□□□ -0.21
CSE2P33308 IMT3tM(CAU)J3 72 nt13.75□□□□□ -0.21
CSE2P33308 IMT1tM(CAU)O1 72 nt13.75□□□□□ -0.21
CSE2P33308 IMT2tM(CAU)P 72 nt13.75□□□□□ -0.21
CSE2P33308 BDH2YAL061W 1254 nt13.75□□□□□ -0.21
CSE2P33308 NAB2YGL122C 1578 nt13.67□□□□□ -0.22
CSE2P33308 BUD23YCR047C 828 nt13.65□□□□□ -0.22
CSE2P33308 LSM3YLR438C-A 270 nt13.64□□□□□ -0.23
CSE2P33308 INM2YDR287W 879 nt13.62□□□□□ -0.23
CSE2P33308 YLR281CYLR281C 468 nt13.56□□□□□ -0.24
CSE2P33308 DAL1YIR027C 1383 nt13.56□□□□□ -0.24
CSE2P33308 FIS1YIL065C 468 nt13.53□□□□□ -0.24
CSE2P33308 YBL100CYBL100C 315 nt13.53□□□□□ -0.24
CSE2P33308 BSC6YOL137W 1494 nt13.53□□□□□ -0.24
CSE2P33308 PUS2YGL063W 1113 nt13.5□□□□□ -0.25
CSE2P33308 FPR4YLR449W 1179 nt13.48□□□□□ -0.25
CSE2P33308 WHI5YOR083W 888 nt13.45□□□□□ -0.26
CSE2P33308 PHO4YFR034C 939 nt13.42□□□□□ -0.26
CSE2P33308 TRM9YML014W 840 nt13.41□□□□□ -0.26
CSE2P33308 FUN26YAL022C 1554 nt13.39□□□□□ -0.27
CSE2P33308 MOT3YMR070W 1473 nt13.32□□□□□ -0.28
CSE2P33308 CCT6YDR188W 1641 nt13.29□□□□□ -0.28
CSE2P33308 YPR011CYPR011C 981 nt13.21□□□□□ -0.29
CSE2P33308 YLR154C-GYLR154C-G 150 nt13.2□□□□□ -0.3
CSE2P33308 DSK2YMR276W 1122 nt13.2□□□□□ -0.3
CSE2P33308 FMP45YDL222C 930 nt13.16□□□□□ -0.3
CSE2P33308 IMP2'YIL154C 1041 nt13.16□□□□□ -0.3
CSE2P33308 YLR236CYLR236C 324 nt13.16□□□□□ -0.3
CSE2P33308 SUF2tP(AGG)C 72 nt13.12□□□□□ -0.31
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms