Protein–RNA interactions for Protein: P39709

SEO1, Probable transporter SEO1, yeastyeast

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEO1P39709 YML009W-BYML009W-B 477 nt20.55■□□□□ 0.88
SEO1P39709 NSR1YGR159C 1245 nt20.46■□□□□ 0.87
SEO1P39709 NOP1YDL014W 984 nt19.88■□□□□ 0.77
SEO1P39709 MDJ1YFL016C 1536 nt18.31■□□□□ 0.52
SEO1P39709 YKL036CYKL036C 393 nt18.3■□□□□ 0.52
SEO1P39709 Q0297Q0297 156 nt17.39■□□□□ 0.37
SEO1P39709 SRX1YKL086W 384 nt17.39■□□□□ 0.37
SEO1P39709 YJL027CYJL027C 417 nt17.08■□□□□ 0.32
SEO1P39709 SCS3YGL126W 1143 nt16.62■□□□□ 0.25
SEO1P39709 YCR051WYCR051W 669 nt16.54■□□□□ 0.24
SEO1P39709 DBP2YNL112W 1641 nt16.16■□□□□ 0.18
SEO1P39709 YOL085CYOL085C 342 nt15.88■□□□□ 0.13
SEO1P39709 TRN1tP(UGG)A 72 nt15.77■□□□□ 0.12
SEO1P39709 SUF9tP(UGG)F 72 nt15.77■□□□□ 0.12
SEO1P39709 SUF8tP(UGG)H 72 nt15.77■□□□□ 0.12
SEO1P39709 tP(UGG)LtP(UGG)L 72 nt15.77■□□□□ 0.12
SEO1P39709 SUF7tP(UGG)M 72 nt15.77■□□□□ 0.12
SEO1P39709 tP(UGG)N1tP(UGG)N1 72 nt15.77■□□□□ 0.12
SEO1P39709 tP(UGG)N2tP(UGG)N2 72 nt15.77■□□□□ 0.12
SEO1P39709 tP(UGG)O1tP(UGG)O1 72 nt15.77■□□□□ 0.12
SEO1P39709 SUF11tP(UGG)O2 72 nt15.77■□□□□ 0.12
SEO1P39709 PKP1YIL042C 1185 nt15.7■□□□□ 0.1
SEO1P39709 CCC1YLR220W 969 nt15.7■□□□□ 0.1
SEO1P39709 RPP1BYDL130W 321 nt15.61■□□□□ 0.09
SEO1P39709 YBR190WYBR190W 312 nt15.57■□□□□ 0.08
SEO1P39709 RTC3YHR087W 336 nt15.28■□□□□ 0.04
SEO1P39709 RVS167YDR388W 1449 nt15.1■□□□□ 0.01
SEO1P39709 SCJ1YMR214W 1134 nt15.07■□□□□ 0
SEO1P39709 PET122YER153C 765 nt14.96□□□□□ -0.01
SEO1P39709 tP(UGG)O3tP(UGG)O3 72 nt14.92□□□□□ -0.02
SEO1P39709 ATS1YAL020C 1002 nt14.84□□□□□ -0.03
SEO1P39709 SCR1SCR1 522 nt14.73□□□□□ -0.05
SEO1P39709 SSA3YBL075C 1950 nt14.61□□□□□ -0.07
SEO1P39709 SHR5YOL110W 714 nt14.57□□□□□ -0.08
SEO1P39709 RRN5YLR141W 1092 nt14.53□□□□□ -0.08
SEO1P39709 YDJ1YNL064C 1230 nt14.4□□□□□ -0.1
SEO1P39709 DEP1YAL013W 1218 nt14.28□□□□□ -0.12
SEO1P39709 URN1YPR152C 1398 nt14.26□□□□□ -0.13
SEO1P39709 YER088W-BYER088W-B 147 nt14.23□□□□□ -0.13
SEO1P39709 PUT4YOR348C 1884 nt14.23□□□□□ -0.13
SEO1P39709 RSB1YOR049C 1065 nt14.2□□□□□ -0.14
SEO1P39709 GAR1YHR089C 618 nt14.15□□□□□ -0.14
SEO1P39709 OPI9YLR338W 858 nt14.04□□□□□ -0.16
SEO1P39709 SAH1YER043C 1350 nt14.03□□□□□ -0.16
SEO1P39709 RPN10YHR200W 807 nt13.96□□□□□ -0.17
SEO1P39709 YNL208WYNL208W 600 nt13.96□□□□□ -0.17
SEO1P39709 ARE1YCR048W 1833 nt13.96□□□□□ -0.17
SEO1P39709 POA1YBR022W 534 nt13.83□□□□□ -0.2
SEO1P39709 YHR049C-AYHR049C-A 297 nt13.78□□□□□ -0.2
SEO1P39709 PST2YDR032C 597 nt13.76□□□□□ -0.21
SEO1P39709 TIR1YER011W 765 nt13.66□□□□□ -0.22
SEO1P39709 PUN1YLR414C 792 nt13.61□□□□□ -0.23
SEO1P39709 YJR018WYJR018W 363 nt13.59□□□□□ -0.23
SEO1P39709 SSA1YAL005C 1929 nt13.54□□□□□ -0.24
SEO1P39709 PTC2YER089C 1395 nt13.52□□□□□ -0.25
SEO1P39709 BSC6YOL137W 1494 nt13.51□□□□□ -0.25
SEO1P39709 BUD23YCR047C 828 nt13.49□□□□□ -0.25
SEO1P39709 YJR120WYJR120W 351 nt13.39□□□□□ -0.27
SEO1P39709 SRB2YHR041C 633 nt13.35□□□□□ -0.27
SEO1P39709 NAB2YGL122C 1578 nt13.31□□□□□ -0.28
SEO1P39709 RPP2BYDR382W 333 nt13.25□□□□□ -0.29
SEO1P39709 SHU1YHL006C 453 nt13.25□□□□□ -0.29
SEO1P39709 SPT5YML010W 3192 nt13.16□□□□□ -0.3
SEO1P39709 YKL097CYKL097C 411 nt13.16□□□□□ -0.3
SEO1P39709 FPR4YLR449W 1179 nt13.15□□□□□ -0.3
SEO1P39709 YAL037C-BYAL037C-B 975 nt13.13□□□□□ -0.31
SEO1P39709 FIS1YIL065C 468 nt13.12□□□□□ -0.31
SEO1P39709 DAL1YIR027C 1383 nt13.11□□□□□ -0.31
SEO1P39709 INM2YDR287W 879 nt13.09□□□□□ -0.31
SEO1P39709 WWM1YFL010C 636 nt13.08□□□□□ -0.32
SEO1P39709 PHO4YFR034C 939 nt13.01□□□□□ -0.33
SEO1P39709 SSA4YER103W 1929 nt13□□□□□ -0.33
SEO1P39709 BDH2YAL061W 1254 nt12.99□□□□□ -0.33
SEO1P39709 YBL100CYBL100C 315 nt12.97□□□□□ -0.33
SEO1P39709 YGR021WYGR021W 873 nt12.88□□□□□ -0.35
SEO1P39709 HOM6YJR139C 1080 nt12.88□□□□□ -0.35
SEO1P39709 MNP1YGL068W 585 nt12.85□□□□□ -0.35
SEO1P39709 FUN26YAL022C 1554 nt12.82□□□□□ -0.36
SEO1P39709 YFL021C-AYFL021C-A 855 nt12.8□□□□□ -0.36
SEO1P39709 LSM3YLR438C-A 270 nt12.79□□□□□ -0.36
SEO1P39709 TRM9YML014W 840 nt12.78□□□□□ -0.36
SEO1P39709 YPS1YLR120C 1710 nt12.78□□□□□ -0.36
SEO1P39709 RKM5YLR137W 1104 nt12.69□□□□□ -0.38
SEO1P39709 YDR095CYDR095C 411 nt12.68□□□□□ -0.38
SEO1P39709 YOR139CYOR139C 393 nt12.68□□□□□ -0.38
SEO1P39709 YHR165W-AYHR165W-A 312 nt12.67□□□□□ -0.38
SEO1P39709 MEP2YNL142W 1500 nt12.67□□□□□ -0.38
SEO1P39709 ALF1YNL148C 765 nt12.64□□□□□ -0.39
SEO1P39709 CCT6YDR188W 1641 nt12.62□□□□□ -0.39
SEO1P39709 BDF1YLR399C 2061 nt12.57□□□□□ -0.4
SEO1P39709 NPL3YDR432W 1245 nt12.56□□□□□ -0.4
SEO1P39709 DCW1YKL046C 1350 nt12.53□□□□□ -0.4
SEO1P39709 YOL037CYOL037C 354 nt12.51□□□□□ -0.41
SEO1P39709 SUF2tP(AGG)C 72 nt12.5□□□□□ -0.41
SEO1P39709 SUF10tP(AGG)N 72 nt12.5□□□□□ -0.41
SEO1P39709 SIS1YNL007C 1059 nt12.46□□□□□ -0.41
SEO1P39709 RPP2AYOL039W 321 nt12.46□□□□□ -0.41
SEO1P39709 PTP1YDL230W 1008 nt12.44□□□□□ -0.42
SEO1P39709 CAC2YML102W 1407 nt12.38□□□□□ -0.43
SEO1P39709 TAT1YBR069C 1860 nt12.38□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 38.4 ms