RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A PKP2P53170 491 aa2.78□□□□□ -1.97
YFL002W-AYFL002W-A COG2P53271 262 aa2.78□□□□□ -1.97
YFL002W-AYFL002W-A YMR102CQ03177 834 aa2.78□□□□□ -1.97
YFL002W-AYFL002W-A NUP1P20676 1076 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A RPS2P25443 254 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A PPZ1P26570 692 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A LAS21P40367 830 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A SPG5P42933 373 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A SMX3P54999 86 aaPredicted RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A RMD5Q12508 421 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YIL002W-AQ3E7Z5 69 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A RHO2P06781 192 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A RPB4P20433 221 aaPredicted RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A RME1P32338 300 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A MIA40P36046 403 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A HXT9P40885 567 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A PHO86P46956 311 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A BUD32P53323 261 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A SRL4Q03085 281 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YMR087WQ04299 284 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A CSI1Q04368 295 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A URC2Q04411 772 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A ATG38Q05789 226 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A TMA10Q06177 86 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YDL057WQ07379 328 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A SRN2Q99176 213 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A WHI2P12611 486 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A IML3P38265 245 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A EFM2P38347 419 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A ARO10Q06408 635 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YLR040CQ07988 224 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A MSF1P08425 469 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A ARO4P32449 370 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A KKQ8P36004 724 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YNL134CP53912 376 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A SHR3Q02774 210 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A EMI2Q04409 500 aaKnown RBP2.77□□□□□ -1.97
YFL002W-AYFL002W-A ATG26Q06321 1198 aa2.77□□□□□ -1.97
YFL002W-AYFL002W-A YUR1P26725 428 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PPS1P38148 807 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A VHC1P38329 1120 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PTR3P43606 678 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A NSG2P53898 299 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A SNZ1Q03148 297 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A CDA2Q06703 312 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A CHS1P08004 1131 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PMA2P19657 947 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A HXT2P23585 541 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A ERG4P25340 473 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A HSP104P31539 908 aaKnown RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A YER130CP39959 443 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A YJR011CP47086 261 aaPredicted RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A YDL186WP48568 277 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A UBP8P50102 471 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A YLR173WQ06247 608 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A NSE1Q07913 336 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A RAV1P47104 1357 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PMA1P05030 918 aaKnown RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A STE11P23561 717 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A EMP70P32802 667 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PET100P38958 111 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A YJR154WP47181 346 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A SPT20P50875 604 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A PIB2P53191 635 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A MPP6P53725 186 aaPredicted RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A THP1Q08231 455 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A YRM1Q12340 786 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A SEC3P33332 1336 aaKnown RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A ALG7P07286 448 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A POL30P15873 258 aaKnown RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A TOA2P32774 122 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A TAE1P38340 232 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A EXO1P39875 702 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A LCP5P40079 357 aaPredicted RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A YJL070CP40361 888 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A MSS2P40990 351 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A SNU56Q03782 492 aaKnown RBP2.76□□□□□ -1.97
YFL002W-AYFL002W-A ARR1Q06596 294 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A SMC5Q08204 1093 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A FMP16Q12497 93 aa2.76□□□□□ -1.97
YFL002W-AYFL002W-A YPR089WO13585 888 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A THR4P16120 514 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A YPS1P32329 569 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A IMP3P32899 183 aaPredicted RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A AIM10P39965 576 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A YAR1P46683 200 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A IMD3P50095 523 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A ECM7Q06200 448 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A RDR1Q08904 546 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A RKM5Q12367 367 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A RNR2P09938 399 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A ARC19P33204 171 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A SHP1P34223 423 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A PEX18P38855 283 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A ATM1P40416 690 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A MMT1Q03218 510 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A INP2Q03824 705 aa2.75□□□□□ -1.97
YFL002W-AYFL002W-A CLP1Q08685 445 aaPredicted RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A ZUO1P32527 433 aaKnown RBP2.75□□□□□ -1.97
YFL002W-AYFL002W-A PUB1P32588 453 aaKnown RBP RIP-Chip data2.75□□□□□ -1.97not detected
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms