Protein–RNA interactions for Protein: P20676

NUP1, Nucleoporin NUP1, yeastyeast

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP1P20676 NSR1YGR159C 1245 nt18.38■□□□□ 0.53
NUP1P20676 YML009W-BYML009W-B 477 nt18.38■□□□□ 0.53
NUP1P20676 NOP1YDL014W 984 nt17.86■□□□□ 0.45
NUP1P20676 MDJ1YFL016C 1536 nt16.4■□□□□ 0.22
NUP1P20676 YKL036CYKL036C 393 nt16.32■□□□□ 0.2
NUP1P20676 SRX1YKL086W 384 nt15.56■□□□□ 0.08
NUP1P20676 Q0297Q0297 156 nt15.54■□□□□ 0.08
NUP1P20676 YJL027CYJL027C 417 nt15.21■□□□□ 0.03
NUP1P20676 YCR051WYCR051W 669 nt14.76□□□□□ -0.05
NUP1P20676 SCS3YGL126W 1143 nt14.75□□□□□ -0.05
NUP1P20676 DBP2YNL112W 1641 nt14.43□□□□□ -0.1
NUP1P20676 TRN1tP(UGG)A 72 nt14.14□□□□□ -0.15
NUP1P20676 SUF9tP(UGG)F 72 nt14.14□□□□□ -0.15
NUP1P20676 SUF8tP(UGG)H 72 nt14.14□□□□□ -0.15
NUP1P20676 tP(UGG)LtP(UGG)L 72 nt14.14□□□□□ -0.15
NUP1P20676 SUF7tP(UGG)M 72 nt14.14□□□□□ -0.15
NUP1P20676 tP(UGG)N1tP(UGG)N1 72 nt14.14□□□□□ -0.15
NUP1P20676 tP(UGG)N2tP(UGG)N2 72 nt14.14□□□□□ -0.15
NUP1P20676 tP(UGG)O1tP(UGG)O1 72 nt14.14□□□□□ -0.15
NUP1P20676 SUF11tP(UGG)O2 72 nt14.14□□□□□ -0.15
NUP1P20676 YOL085CYOL085C 342 nt14.11□□□□□ -0.15
NUP1P20676 YBR190WYBR190W 312 nt14.06□□□□□ -0.16
NUP1P20676 CCC1YLR220W 969 nt13.99□□□□□ -0.17
NUP1P20676 RPP1BYDL130W 321 nt13.95□□□□□ -0.18
NUP1P20676 PKP1YIL042C 1185 nt13.89□□□□□ -0.19
NUP1P20676 RTC3YHR087W 336 nt13.75□□□□□ -0.21
NUP1P20676 RVS167YDR388W 1449 nt13.65□□□□□ -0.22
NUP1P20676 SCJ1YMR214W 1134 nt13.46□□□□□ -0.25
NUP1P20676 tP(UGG)O3tP(UGG)O3 72 nt13.33□□□□□ -0.28
NUP1P20676 PET122YER153C 765 nt13.32□□□□□ -0.28
NUP1P20676 SCR1SCR1 522 nt13.22□□□□□ -0.29
NUP1P20676 ATS1YAL020C 1002 nt13.16□□□□□ -0.3
NUP1P20676 SHR5YOL110W 714 nt13.12□□□□□ -0.31
NUP1P20676 RRN5YLR141W 1092 nt12.92□□□□□ -0.34
NUP1P20676 YDJ1YNL064C 1230 nt12.91□□□□□ -0.34
NUP1P20676 PUT4YOR348C 1884 nt12.82□□□□□ -0.36
NUP1P20676 URN1YPR152C 1398 nt12.81□□□□□ -0.36
NUP1P20676 DEP1YAL013W 1218 nt12.74□□□□□ -0.37
NUP1P20676 SSA3YBL075C 1950 nt12.67□□□□□ -0.38
NUP1P20676 YER088W-BYER088W-B 147 nt12.66□□□□□ -0.38
NUP1P20676 RPN10YHR200W 807 nt12.66□□□□□ -0.38
NUP1P20676 OPI9YLR338W 858 nt12.65□□□□□ -0.38
NUP1P20676 RSB1YOR049C 1065 nt12.65□□□□□ -0.38
NUP1P20676 GAR1YHR089C 618 nt12.63□□□□□ -0.39
NUP1P20676 SAH1YER043C 1350 nt12.57□□□□□ -0.4
NUP1P20676 YNL208WYNL208W 600 nt12.57□□□□□ -0.4
NUP1P20676 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
NUP1P20676 YHR049C-AYHR049C-A 297 nt12.42□□□□□ -0.42
NUP1P20676 POA1YBR022W 534 nt12.42□□□□□ -0.42
NUP1P20676 PUN1YLR414C 792 nt12.32□□□□□ -0.44
NUP1P20676 TIR1YER011W 765 nt12.22□□□□□ -0.45
NUP1P20676 YJR018WYJR018W 363 nt12.21□□□□□ -0.45
NUP1P20676 PST2YDR032C 597 nt12.19□□□□□ -0.46
NUP1P20676 BSC6YOL137W 1494 nt12.18□□□□□ -0.46
NUP1P20676 PTC2YER089C 1395 nt12.15□□□□□ -0.46
NUP1P20676 BUD23YCR047C 828 nt12.13□□□□□ -0.47
NUP1P20676 SSA1YAL005C 1929 nt12.05□□□□□ -0.48
NUP1P20676 NAB2YGL122C 1578 nt12.03□□□□□ -0.48
NUP1P20676 RPP2BYDR382W 333 nt11.99□□□□□ -0.49
NUP1P20676 YJR120WYJR120W 351 nt11.93□□□□□ -0.5
NUP1P20676 DAL1YIR027C 1383 nt11.85□□□□□ -0.51
NUP1P20676 INM2YDR287W 879 nt11.82□□□□□ -0.52
NUP1P20676 FIS1YIL065C 468 nt11.82□□□□□ -0.52
NUP1P20676 FPR4YLR449W 1179 nt11.81□□□□□ -0.52
NUP1P20676 SRB2YHR041C 633 nt11.77□□□□□ -0.53
NUP1P20676 PHO4YFR034C 939 nt11.72□□□□□ -0.53
NUP1P20676 SHU1YHL006C 453 nt11.72□□□□□ -0.53
NUP1P20676 YKL097CYKL097C 411 nt11.68□□□□□ -0.54
NUP1P20676 BDH2YAL061W 1254 nt11.68□□□□□ -0.54
NUP1P20676 YBL100CYBL100C 315 nt11.68□□□□□ -0.54
NUP1P20676 WWM1YFL010C 636 nt11.63□□□□□ -0.55
NUP1P20676 SPT5YML010W 3192 nt11.61□□□□□ -0.55
NUP1P20676 YGR021WYGR021W 873 nt11.6□□□□□ -0.55
NUP1P20676 YAL037C-BYAL037C-B 975 nt11.56□□□□□ -0.56
NUP1P20676 YPS1YLR120C 1710 nt11.53□□□□□ -0.56
NUP1P20676 LSM3YLR438C-A 270 nt11.52□□□□□ -0.57
NUP1P20676 FUN26YAL022C 1554 nt11.51□□□□□ -0.57
NUP1P20676 TRM9YML014W 840 nt11.5□□□□□ -0.57
NUP1P20676 YFL021C-AYFL021C-A 855 nt11.49□□□□□ -0.57
NUP1P20676 HOM6YJR139C 1080 nt11.49□□□□□ -0.57
NUP1P20676 MEP2YNL142W 1500 nt11.45□□□□□ -0.58
NUP1P20676 YDR095CYDR095C 411 nt11.44□□□□□ -0.58
NUP1P20676 YHR165W-AYHR165W-A 312 nt11.44□□□□□ -0.58
NUP1P20676 ALF1YNL148C 765 nt11.43□□□□□ -0.58
NUP1P20676 MNP1YGL068W 585 nt11.4□□□□□ -0.58
NUP1P20676 CCT6YDR188W 1641 nt11.37□□□□□ -0.59
NUP1P20676 SUF2tP(AGG)C 72 nt11.34□□□□□ -0.59
NUP1P20676 SUF10tP(AGG)N 72 nt11.34□□□□□ -0.59
NUP1P20676 RKM5YLR137W 1104 nt11.34□□□□□ -0.59
NUP1P20676 SSA4YER103W 1929 nt11.29□□□□□ -0.6
NUP1P20676 YOL037CYOL037C 354 nt11.24□□□□□ -0.61
NUP1P20676 RPP2AYOL039W 321 nt11.24□□□□□ -0.61
NUP1P20676 DCW1YKL046C 1350 nt11.23□□□□□ -0.61
NUP1P20676 NPL3YDR432W 1245 nt11.2□□□□□ -0.62
NUP1P20676 Q0182Q0182 405 nt11.2□□□□□ -0.62
NUP1P20676 SIS1YNL007C 1059 nt11.2□□□□□ -0.62
NUP1P20676 YOR139CYOR139C 393 nt11.18□□□□□ -0.62
NUP1P20676 PTP1YDL230W 1008 nt11.14□□□□□ -0.63
NUP1P20676 YMR090WYMR090W 684 nt11.13□□□□□ -0.63
NUP1P20676 EMI2YDR516C 1503 nt11.13□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 7.8 ms