Protein–RNA interactions for Protein: P12611

WHI2, Growth regulation protein, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
WHI2P12611 YML009W-BYML009W-B 477 nt22.38■■□□□ 1.17
WHI2P12611 NSR1YGR159C 1245 nt22.01■■□□□ 1.11
WHI2P12611 NOP1YDL014W 984 nt21.87■■□□□ 1.09
WHI2P12611 YKL036CYKL036C 393 nt20.42■□□□□ 0.86
WHI2P12611 MDJ1YFL016C 1536 nt19.28■□□□□ 0.68
WHI2P12611 Q0297Q0297 156 nt19.22■□□□□ 0.67
WHI2P12611 YJL027CYJL027C 417 nt19.11■□□□□ 0.65
WHI2P12611 SRX1YKL086W 384 nt19.11■□□□□ 0.65
WHI2P12611 SCS3YGL126W 1143 nt18.71■□□□□ 0.59
WHI2P12611 YCR051WYCR051W 669 nt18.15■□□□□ 0.5
WHI2P12611 YOL085CYOL085C 342 nt17.66■□□□□ 0.42
WHI2P12611 PKP1YIL042C 1185 nt17.36■□□□□ 0.37
WHI2P12611 RPP1BYDL130W 321 nt17.25■□□□□ 0.35
WHI2P12611 DBP2YNL112W 1641 nt17.16■□□□□ 0.34
WHI2P12611 TRN1tP(UGG)A 72 nt17.12■□□□□ 0.33
WHI2P12611 SUF9tP(UGG)F 72 nt17.12■□□□□ 0.33
WHI2P12611 SUF8tP(UGG)H 72 nt17.12■□□□□ 0.33
WHI2P12611 tP(UGG)LtP(UGG)L 72 nt17.12■□□□□ 0.33
WHI2P12611 SUF7tP(UGG)M 72 nt17.12■□□□□ 0.33
WHI2P12611 tP(UGG)N1tP(UGG)N1 72 nt17.12■□□□□ 0.33
WHI2P12611 tP(UGG)N2tP(UGG)N2 72 nt17.12■□□□□ 0.33
WHI2P12611 tP(UGG)O1tP(UGG)O1 72 nt17.12■□□□□ 0.33
WHI2P12611 SUF11tP(UGG)O2 72 nt17.12■□□□□ 0.33
WHI2P12611 CCC1YLR220W 969 nt16.94■□□□□ 0.3
WHI2P12611 SCJ1YMR214W 1134 nt16.93■□□□□ 0.3
WHI2P12611 ATS1YAL020C 1002 nt16.8■□□□□ 0.28
WHI2P12611 PET122YER153C 765 nt16.44■□□□□ 0.22
WHI2P12611 YBR190WYBR190W 312 nt16.39■□□□□ 0.21
WHI2P12611 SCR1SCR1 522 nt16.36■□□□□ 0.21
WHI2P12611 tP(UGG)O3tP(UGG)O3 72 nt16.28■□□□□ 0.2
WHI2P12611 RVS167YDR388W 1449 nt16.23■□□□□ 0.19
WHI2P12611 RTC3YHR087W 336 nt16.04■□□□□ 0.16
WHI2P12611 RRN5YLR141W 1092 nt15.99■□□□□ 0.15
WHI2P12611 YDJ1YNL064C 1230 nt15.75■□□□□ 0.11
WHI2P12611 RSB1YOR049C 1065 nt15.75■□□□□ 0.11
WHI2P12611 SHR5YOL110W 714 nt15.72■□□□□ 0.11
WHI2P12611 YER088W-BYER088W-B 147 nt15.68■□□□□ 0.1
WHI2P12611 PST2YDR032C 597 nt15.51■□□□□ 0.07
WHI2P12611 GAR1YHR089C 618 nt15.35■□□□□ 0.05
WHI2P12611 DEP1YAL013W 1218 nt15.16■□□□□ 0.02
WHI2P12611 URN1YPR152C 1398 nt15.11■□□□□ 0.01
WHI2P12611 YKL097CYKL097C 411 nt15.06■□□□□ 0
WHI2P12611 YNL208WYNL208W 600 nt14.98□□□□□ -0.01
WHI2P12611 RPN10YHR200W 807 nt14.97□□□□□ -0.01
WHI2P12611 OPI9YLR338W 858 nt14.84□□□□□ -0.03
WHI2P12611 TIR1YER011W 765 nt14.83□□□□□ -0.04
WHI2P12611 SHU1YHL006C 453 nt14.82□□□□□ -0.04
WHI2P12611 SAH1YER043C 1350 nt14.66□□□□□ -0.06
WHI2P12611 PUT4YOR348C 1884 nt14.65□□□□□ -0.06
WHI2P12611 SSA1YAL005C 1929 nt14.58□□□□□ -0.07
WHI2P12611 YAL037C-BYAL037C-B 975 nt14.51□□□□□ -0.09
WHI2P12611 ARE1YCR048W 1833 nt14.48□□□□□ -0.09
WHI2P12611 YJR018WYJR018W 363 nt14.44□□□□□ -0.1
WHI2P12611 PUN1YLR414C 792 nt14.42□□□□□ -0.1
WHI2P12611 YOR139CYOR139C 393 nt14.38□□□□□ -0.11
WHI2P12611 SRB2YHR041C 633 nt14.37□□□□□ -0.11
WHI2P12611 YHR049C-AYHR049C-A 297 nt14.3□□□□□ -0.12
WHI2P12611 YJR120WYJR120W 351 nt14.25□□□□□ -0.13
WHI2P12611 NPL3YDR432W 1245 nt14.24□□□□□ -0.13
WHI2P12611 RPP2BYDR382W 333 nt14.23□□□□□ -0.13
WHI2P12611 YGR021WYGR021W 873 nt14.23□□□□□ -0.13
WHI2P12611 SSA3YBL075C 1950 nt14.23□□□□□ -0.13
WHI2P12611 POA1YBR022W 534 nt14.22□□□□□ -0.13
WHI2P12611 WWM1YFL010C 636 nt14.21□□□□□ -0.13
WHI2P12611 HOM6YJR139C 1080 nt14.18□□□□□ -0.14
WHI2P12611 PTC2YER089C 1395 nt14.18□□□□□ -0.14
WHI2P12611 MNP1YGL068W 585 nt14.15□□□□□ -0.14
WHI2P12611 YOL037CYOL037C 354 nt14.04□□□□□ -0.16
WHI2P12611 BUD23YCR047C 828 nt14□□□□□ -0.17
WHI2P12611 YFL021C-AYFL021C-A 855 nt14□□□□□ -0.17
WHI2P12611 BDH2YAL061W 1254 nt13.99□□□□□ -0.17
WHI2P12611 RKM5YLR137W 1104 nt13.98□□□□□ -0.17
WHI2P12611 NAB2YGL122C 1578 nt13.97□□□□□ -0.17
WHI2P12611 INM2YDR287W 879 nt13.89□□□□□ -0.19
WHI2P12611 BSC6YOL137W 1494 nt13.86□□□□□ -0.19
WHI2P12611 LSM3YLR438C-A 270 nt13.85□□□□□ -0.19
WHI2P12611 DAL1YIR027C 1383 nt13.84□□□□□ -0.19
WHI2P12611 tM(CAU)CtM(CAU)C 72 nt13.81□□□□□ -0.2
WHI2P12611 IMT4tM(CAU)E 72 nt13.81□□□□□ -0.2
WHI2P12611 IMT3tM(CAU)J3 72 nt13.81□□□□□ -0.2
WHI2P12611 IMT1tM(CAU)O1 72 nt13.81□□□□□ -0.2
WHI2P12611 IMT2tM(CAU)P 72 nt13.81□□□□□ -0.2
WHI2P12611 FPR4YLR449W 1179 nt13.8□□□□□ -0.2
WHI2P12611 YBL100CYBL100C 315 nt13.8□□□□□ -0.2
WHI2P12611 FIS1YIL065C 468 nt13.79□□□□□ -0.2
WHI2P12611 PHO4YFR034C 939 nt13.7□□□□□ -0.22
WHI2P12611 YLR281CYLR281C 468 nt13.67□□□□□ -0.22
WHI2P12611 TRM9YML014W 840 nt13.67□□□□□ -0.22
WHI2P12611 FUN26YAL022C 1554 nt13.64□□□□□ -0.23
WHI2P12611 PUS2YGL063W 1113 nt13.63□□□□□ -0.23
WHI2P12611 WHI5YOR083W 888 nt13.59□□□□□ -0.23
WHI2P12611 CCT6YDR188W 1641 nt13.52□□□□□ -0.25
WHI2P12611 SUF2tP(AGG)C 72 nt13.4□□□□□ -0.26
WHI2P12611 SUF10tP(AGG)N 72 nt13.4□□□□□ -0.26
WHI2P12611 ALF1YNL148C 765 nt13.4□□□□□ -0.26
WHI2P12611 YLR154C-GYLR154C-G 150 nt13.39□□□□□ -0.27
WHI2P12611 MOT3YMR070W 1473 nt13.37□□□□□ -0.27
WHI2P12611 DSK2YMR276W 1122 nt13.35□□□□□ -0.27
WHI2P12611 YPS1YLR120C 1710 nt13.33□□□□□ -0.27
WHI2P12611 IMP2'YIL154C 1041 nt13.33□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms