RNA–Protein interactions for RNA: YFL002W-A

YFL002W-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YFL002W-A, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFL002W-AYFL002W-A DRS1P32892 752 aaKnown RBP6.72□□□□□ -1.33
YFL002W-AYFL002W-A MTC1P47018 478 aaKnown RBP6.19□□□□□ -1.42
YFL002W-AYFL002W-A TFA1P36100 482 aa6.16□□□□□ -1.42
YFL002W-AYFL002W-A BFR2Q06631 534 aaKnown RBP6.03□□□□□ -1.44
YFL002W-AYFL002W-A AVT3P36062 692 aa5.72□□□□□ -1.49
YFL002W-AYFL002W-A RQC2Q12532 1038 aaKnown RBP5.56□□□□□ -1.52
YFL002W-AYFL002W-A DIP2Q12220 943 aaPredicted RBP5.55□□□□□ -1.52
YFL002W-AYFL002W-A TAF7Q05021 590 aa5.42□□□□□ -1.54
YFL002W-AYFL002W-A DMA1P38823 416 aa5.26□□□□□ -1.57
YFL002W-AYFL002W-A LEO1P38439 464 aa5.09□□□□□ -1.59
YFL002W-AYFL002W-A RSE1Q04693 1361 aaKnown RBP5.02□□□□□ -1.61
YFL002W-AYFL002W-A PTP3P40048 928 aa4.94□□□□□ -1.62
YFL002W-AYFL002W-A SAS10Q12136 610 aaPredicted RBP4.89□□□□□ -1.63
YFL002W-AYFL002W-A LEU3P08638 886 aa4.89□□□□□ -1.63
YFL002W-AYFL002W-A RIM101P33400 625 aa4.85□□□□□ -1.63
YFL002W-AYFL002W-A SPT21P35209 758 aa4.84□□□□□ -1.64
YFL002W-AYFL002W-A ABP1P15891 592 aaKnown RBP4.83□□□□□ -1.64
YFL002W-AYFL002W-A SSP1P38871 571 aa4.82□□□□□ -1.64
YFL002W-AYFL002W-A RPL17AP05740 184 aaKnown RBP4.82□□□□□ -1.64
YFL002W-AYFL002W-A RPL17BP46990 184 aaKnown RBP4.82□□□□□ -1.64
YFL002W-AYFL002W-A ISW2Q08773 1120 aa4.79□□□□□ -1.64
YFL002W-AYFL002W-A RPG1P38249 964 aaKnown RBP4.77□□□□□ -1.65
YFL002W-AYFL002W-A OXP1P28273 1286 aa4.74□□□□□ -1.65
YFL002W-AYFL002W-A DMA2P53924 522 aa4.73□□□□□ -1.65
YFL002W-AYFL002W-A YLR271WQ06152 274 aa4.7□□□□□ -1.66
YFL002W-AYFL002W-A PRI1P10363 409 aa4.66□□□□□ -1.66
YFL002W-AYFL002W-A REB1P21538 810 aa4.64□□□□□ -1.67
YFL002W-AYFL002W-A RPN1P38764 993 aaKnown RBP4.64□□□□□ -1.67
YFL002W-AYFL002W-A IFH1P39520 1085 aa4.61□□□□□ -1.67
YFL002W-AYFL002W-A YAH1Q12184 172 aaKnown RBP4.61□□□□□ -1.67
YFL002W-AYFL002W-A CST9Q06032 482 aa4.6□□□□□ -1.67
YFL002W-AYFL002W-A MGA2P40578 1113 aa4.59□□□□□ -1.67
YFL002W-AYFL002W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
YFL002W-AYFL002W-A RLF2Q12495 606 aa4.58□□□□□ -1.68
YFL002W-AYFL002W-A CKB1P43639 278 aa4.55□□□□□ -1.68
YFL002W-AYFL002W-A YKR023WP36119 530 aaKnown RBP4.53□□□□□ -1.68
YFL002W-AYFL002W-A YPR148CQ06523 435 aa4.53□□□□□ -1.68
YFL002W-AYFL002W-A PSD2P53037 1138 aaKnown RBP4.52□□□□□ -1.69
YFL002W-AYFL002W-A RAM2P29703 316 aa4.5□□□□□ -1.69
YFL002W-AYFL002W-A RSM7P47150 247 aa4.49□□□□□ -1.69
YFL002W-AYFL002W-A ORC1P54784 914 aaPredicted RBP4.49□□□□□ -1.69
YFL002W-AYFL002W-A YIL055CP40523 627 aaKnown RBP4.48□□□□□ -1.69
YFL002W-AYFL002W-A DSF2P38213 736 aa4.46□□□□□ -1.7
YFL002W-AYFL002W-A SET1P38827 1080 aaKnown RBP4.45□□□□□ -1.7
YFL002W-AYFL002W-A SPB4P25808 606 aaPredicted RBP4.43□□□□□ -1.7
YFL002W-AYFL002W-A VPS70P47161 811 aa4.43□□□□□ -1.7
YFL002W-AYFL002W-A AAD16Q02895 342 aa4.43□□□□□ -1.7
YFL002W-AYFL002W-A NOP8Q08287 484 aaPredicted RBP4.43□□□□□ -1.7
YFL002W-AYFL002W-A RCR1P38212 213 aa4.42□□□□□ -1.7
YFL002W-AYFL002W-A TSR3Q12094 313 aaKnown RBP4.42□□□□□ -1.7
YFL002W-AYFL002W-A KIN1P13185 1064 aa4.41□□□□□ -1.7
YFL002W-AYFL002W-A TFC8Q12308 588 aa4.41□□□□□ -1.7
YFL002W-AYFL002W-A YNR021WP53723 404 aaKnown RBP4.39□□□□□ -1.71
YFL002W-AYFL002W-A AI2P03876 854 aa4.39□□□□□ -1.71
YFL002W-AYFL002W-A IOC4Q04213 475 aa4.38□□□□□ -1.71
YFL002W-AYFL002W-A YML020WQ03722 664 aa4.38□□□□□ -1.71
YFL002W-AYFL002W-A HOP09932 586 aa4.37□□□□□ -1.71
YFL002W-AYFL002W-A GUA1P38625 525 aaKnown RBP4.37□□□□□ -1.71
YFL002W-AYFL002W-A AIM7Q12156 149 aa4.37□□□□□ -1.71
YFL002W-AYFL002W-A DCD1P06773 312 aa4.36□□□□□ -1.71
YFL002W-AYFL002W-A NAP1P25293 417 aaKnown RBP4.36□□□□□ -1.71
YFL002W-AYFL002W-A NUP42P49686 430 aaKnown RBP4.36□□□□□ -1.71
YFL002W-AYFL002W-A PBS2P08018 668 aa4.36□□□□□ -1.71
YFL002W-AYFL002W-A GLC3P32775 704 aa4.36□□□□□ -1.71
YFL002W-AYFL002W-A DIT2P21595 489 aa4.34□□□□□ -1.72
YFL002W-AYFL002W-A MAM3Q12296 706 aa4.33□□□□□ -1.72
YFL002W-AYFL002W-A MAK11P20484 414 aaKnown RBP4.32□□□□□ -1.72
YFL002W-AYFL002W-A BCH2P36122 765 aa4.31□□□□□ -1.72
YFL002W-AYFL002W-A SUB2Q07478 446 aaKnown RBP4.31□□□□□ -1.72
YFL002W-AYFL002W-A SLX8P40072 274 aa4.29□□□□□ -1.72
YFL002W-AYFL002W-A IES2P40154 320 aa4.29□□□□□ -1.72
YFL002W-AYFL002W-A CDC27P38042 758 aa4.29□□□□□ -1.72
YFL002W-AYFL002W-A HPC2Q01448 625 aa4.28□□□□□ -1.72
YFL002W-AYFL002W-A MRM1P25270 412 aa4.28□□□□□ -1.72
YFL002W-AYFL002W-A FAP1P53971 965 aa4.28□□□□□ -1.72
YFL002W-AYFL002W-A SSA1P10591 642 aaKnown RBP4.27□□□□□ -1.73
YFL002W-AYFL002W-A GEF1P37020 779 aa4.27□□□□□ -1.73
YFL002W-AYFL002W-A GLN1P32288 370 aaKnown RBP4.27□□□□□ -1.73
YFL002W-AYFL002W-A MRX12P47084 519 aa4.26□□□□□ -1.73
YFL002W-AYFL002W-A TFB3Q03290 321 aa4.26□□□□□ -1.73
YFL002W-AYFL002W-A PKC1P24583 1151 aa4.26□□□□□ -1.73
YFL002W-AYFL002W-A AIM44Q99299 758 aa4.25□□□□□ -1.73
YFL002W-AYFL002W-A COQ8P27697 501 aa4.25□□□□□ -1.73
YFL002W-AYFL002W-A VPS29P38759 282 aa4.25□□□□□ -1.73
YFL002W-AYFL002W-A EDS1P38073 919 aa4.23□□□□□ -1.73
YFL002W-AYFL002W-A REF2P42073 533 aaPredicted RBP4.23□□□□□ -1.73
YFL002W-AYFL002W-A RTG3P38165 486 aa4.23□□□□□ -1.73
YFL002W-AYFL002W-A EPS1P40557 701 aa4.23□□□□□ -1.73
YFL002W-AYFL002W-A BBC1P47068 1157 aa4.23□□□□□ -1.73
YFL002W-AYFL002W-A MAK21Q12176 1025 aaKnown RBP4.23□□□□□ -1.73
YFL002W-AYFL002W-A BDF1P35817 686 aa4.22□□□□□ -1.73
YFL002W-AYFL002W-A COX6P00427 148 aa4.22□□□□□ -1.73
YFL002W-AYFL002W-A NOP53Q12080 455 aaKnown RBP4.21□□□□□ -1.73
YFL002W-AYFL002W-A HGH1P48362 394 aaKnown RBP4.21□□□□□ -1.74
YFL002W-AYFL002W-A PAM1P37304 830 aaKnown RBP4.2□□□□□ -1.74
YFL002W-AYFL002W-A ATG32P40458 529 aa4.2□□□□□ -1.74
YFL002W-AYFL002W-A BIM1P40013 344 aa4.19□□□□□ -1.74
YFL002W-AYFL002W-A SEN54Q02825 467 aaPredicted RBP4.19□□□□□ -1.74
YFL002W-AYFL002W-A YDR090CQ03193 310 aa4.19□□□□□ -1.74
YFL002W-AYFL002W-A KTR1P27810 393 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 1875.5 ms