RNA–Protein interactions for RNA: snR17a

snR17a, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17a, Length 333 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17asnR17a TY1A-DR4O74302 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-HP0C2I4 478 aaKnown RBP6.45□□□□□ -1.38
snR17asnR17a TY1A-AP0CX57 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-PR1P0CX58 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-ORP0CX59 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-PR2P0CX60 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-DR5P0CX65 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-ER2P0CX66 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-GR3P0CX67 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-LR1P0CX68 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-MR2P0CX69 440 aa6.45□□□□□ -1.38
snR17asnR17a KEX2P13134 814 aa6.45□□□□□ -1.38
snR17asnR17a SEC2P17065 759 aa6.45□□□□□ -1.38
snR17asnR17a SDH2P21801 266 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-JR2P47099 440 aa6.45□□□□□ -1.38
snR17asnR17a RTF1P53064 558 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-DR1Q03856 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-ML1Q04706 440 aaKnown RBP6.45□□□□□ -1.38
snR17asnR17a TY1A-BRQ12217 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-NL2Q12470 440 aa6.45□□□□□ -1.38
snR17asnR17a TY1A-GR2Q12485 440 aa6.45□□□□□ -1.38
snR17asnR17a ATF2P53296 535 aa6.44□□□□□ -1.38
snR17asnR17a RRN7P40992 514 aa6.43□□□□□ -1.38
snR17asnR17a YNR021WP53723 404 aaKnown RBP6.43□□□□□ -1.38
snR17asnR17a YNL115CP53925 644 aa6.42□□□□□ -1.38
snR17asnR17a SIT4P20604 311 aa6.41□□□□□ -1.38
snR17asnR17a NIS1P53939 407 aa6.4□□□□□ -1.38
snR17asnR17a YMR196WQ04336 1088 aa6.4□□□□□ -1.38
snR17asnR17a ERF2Q06551 359 aa6.4□□□□□ -1.38
snR17asnR17a SRC1Q03707 834 aa6.37□□□□□ -1.39
snR17asnR17a TRK1P12685 1235 aa6.36□□□□□ -1.39
snR17asnR17a GLC3P32775 704 aa6.36□□□□□ -1.39
snR17asnR17a FPK1P53739 893 aa6.36□□□□□ -1.39
snR17asnR17a CST6P40535 587 aa6.35□□□□□ -1.39
snR17asnR17a TUB4P53378 473 aa6.35□□□□□ -1.39
snR17asnR17a SLY41P22215 453 aa6.34□□□□□ -1.39
snR17asnR17a LAM6Q08001 693 aa6.34□□□□□ -1.39
snR17asnR17a AIM7Q12156 149 aa6.34□□□□□ -1.39
snR17asnR17a PAC1P39946 494 aaKnown RBP6.33□□□□□ -1.4
snR17asnR17a BDP1P46678 594 aa6.33□□□□□ -1.4
snR17asnR17a FRK1Q03002 865 aaPredicted RBP6.33□□□□□ -1.4
snR17asnR17a AGE1Q04412 482 aa6.33□□□□□ -1.4
snR17asnR17a LEU3P08638 886 aa6.32□□□□□ -1.4
snR17asnR17a HST2P53686 357 aa6.32□□□□□ -1.4
snR17asnR17a KXD1P53158 218 aa6.31□□□□□ -1.4
snR17asnR17a GLN1P32288 370 aaKnown RBP6.3□□□□□ -1.4
snR17asnR17a MMP1Q12372 583 aa6.3□□□□□ -1.4
snR17asnR17a PUS6P53294 404 aa6.29□□□□□ -1.4
snR17asnR17a TBF1Q02457 562 aa6.29□□□□□ -1.4
snR17asnR17a MOD5P07884 428 aa6.28□□□□□ -1.4
snR17asnR17a HED1Q03937 162 aa6.28□□□□□ -1.4
snR17asnR17a BUB1P41695 1021 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
snR17asnR17a SCJ1P25303 377 aa6.26□□□□□ -1.41
snR17asnR17a CDC4P07834 779 aa6.25□□□□□ -1.41
snR17asnR17a TPD3P31383 635 aa6.25□□□□□ -1.41
snR17asnR17a HXT10P43581 546 aa6.25□□□□□ -1.41
snR17asnR17a ALR1Q08269 859 aa6.25□□□□□ -1.41
snR17asnR17a RPN1P38764 993 aaKnown RBP6.24□□□□□ -1.41
snR17asnR17a AIR1P40507 360 aaKnown RBP6.24□□□□□ -1.41
snR17asnR17a CLA4P48562 842 aa6.24□□□□□ -1.41
snR17asnR17a RPA14P50106 137 aa6.24□□□□□ -1.41
snR17asnR17a GCR2Q01722 534 aa6.24□□□□□ -1.41
snR17asnR17a TRM1P15565 570 aaKnown RBP6.23□□□□□ -1.41
snR17asnR17a ESS1P22696 170 aa6.23□□□□□ -1.41
snR17asnR17a YDL206WQ12424 762 aa6.23□□□□□ -1.41
snR17asnR17a PDC1P06169 563 aaKnown RBP6.22□□□□□ -1.41
snR17asnR17a CSN12P47130 423 aa6.22□□□□□ -1.41
snR17asnR17a YPR097WQ06839 1073 aa6.22□□□□□ -1.41
snR17asnR17a RRD1P40454 393 aaKnown RBP6.21□□□□□ -1.42
snR17asnR17a PUS5Q06244 254 aa6.21□□□□□ -1.42
snR17asnR17a TYW1Q08960 810 aaKnown RBP6.21□□□□□ -1.42
snR17asnR17a KIN1P13185 1064 aa6.2□□□□□ -1.42
snR17asnR17a BRE2P43132 505 aa6.2□□□□□ -1.42
snR17asnR17a SYH1Q02875 849 aaKnown RBP6.2□□□□□ -1.42
snR17asnR17a PKH3Q03306 898 aaPredicted RBP6.19□□□□□ -1.42
snR17asnR17a TAF7Q05021 590 aa6.19□□□□□ -1.42
snR17asnR17a SSA2P10592 639 aaKnown RBP6.18□□□□□ -1.42
snR17asnR17a YJU3P28321 313 aa6.18□□□□□ -1.42
snR17asnR17a KIP2P28743 706 aa6.17□□□□□ -1.42
snR17asnR17a HST3P53687 447 aa6.17□□□□□ -1.42
snR17asnR17a ARG8P18544 423 aa6.16□□□□□ -1.42
snR17asnR17a KTR1P27810 393 aaKnown RBP6.16□□□□□ -1.42
snR17asnR17a AFT1P22149 690 aa6.15□□□□□ -1.42
snR17asnR17a ASH1P34233 588 aa6.15□□□□□ -1.42
snR17asnR17a RSC30P38781 883 aa6.15□□□□□ -1.42
snR17asnR17a MET32Q12041 191 aa6.14□□□□□ -1.43
snR17asnR17a IXR1P33417 597 aa6.13□□□□□ -1.43
snR17asnR17a RAD59Q12223 238 aa6.11□□□□□ -1.43
snR17asnR17a RTT106P40161 455 aa6.09□□□□□ -1.43
snR17asnR17a VAC17P25591 423 aa6.08□□□□□ -1.44
snR17asnR17a MSB3P48566 633 aaPredicted RBP6.08□□□□□ -1.44
snR17asnR17a UGA3P26370 528 aa6.07□□□□□ -1.44
snR17asnR17a MRT4P33201 236 aaKnown RBP6.07□□□□□ -1.44
snR17asnR17a GUA1P38625 525 aaKnown RBP6.07□□□□□ -1.44
snR17asnR17a GBP2P25555 427 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
snR17asnR17a YJR115WP47152 169 aa6.05□□□□□ -1.44
snR17asnR17a HPC2Q01448 625 aa6.05□□□□□ -1.44
snR17asnR17a GAR1P28007 205 aaKnown RBP6.04□□□□□ -1.44
snR17asnR17a ENV9Q08651 330 aa6.04□□□□□ -1.44
snR17asnR17a SRF1Q12516 437 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms