RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W TY1A-DR4O74302 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-HP0C2I4 478 aaKnown RBP5.76□□□□□ -1.49
SNF12YNR023W TY1A-AP0CX57 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-PR1P0CX58 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-ORP0CX59 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-PR2P0CX60 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-DR5P0CX65 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-ER2P0CX66 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-GR3P0CX67 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-LR1P0CX68 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-MR2P0CX69 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-JR2P47099 440 aa5.76□□□□□ -1.49
SNF12YNR023W HST3P53687 447 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-DR1Q03856 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-ML1Q04706 440 aaKnown RBP5.76□□□□□ -1.49
SNF12YNR023W TY1A-BRQ12217 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-NL2Q12470 440 aa5.76□□□□□ -1.49
SNF12YNR023W TY1A-GR2Q12485 440 aa5.76□□□□□ -1.49
SNF12YNR023W GAP1P19145 602 aaPredicted RBP5.75□□□□□ -1.49
SNF12YNR023W ASH1P34233 588 aa5.74□□□□□ -1.49
SNF12YNR023W YDL176WQ12027 708 aa5.74□□□□□ -1.49
SNF12YNR023W SEC2P17065 759 aa5.74□□□□□ -1.49
SNF12YNR023W YDR090CQ03193 310 aa5.73□□□□□ -1.49
SNF12YNR023W AFT1P22149 690 aa5.71□□□□□ -1.5
SNF12YNR023W RRD1P40454 393 aaKnown RBP5.68□□□□□ -1.5
SNF12YNR023W MET32Q12041 191 aa5.68□□□□□ -1.5
SNF12YNR023W ORC6P38826 435 aa5.64□□□□□ -1.51
SNF12YNR023W YJR115WP47152 169 aa5.62□□□□□ -1.51
SNF12YNR023W CAF120P53836 1060 aa5.62□□□□□ -1.51
SNF12YNR023W YPR109WQ06104 294 aa5.62□□□□□ -1.51
SNF12YNR023W REF2P42073 533 aaPredicted RBP5.61□□□□□ -1.51
SNF12YNR023W MVP1P40959 511 aaKnown RBP5.6□□□□□ -1.51
SNF12YNR023W KEX2P13134 814 aa5.6□□□□□ -1.51
SNF12YNR023W PUS5Q06244 254 aa5.6□□□□□ -1.51
SNF12YNR023W TRK2P28584 889 aa5.59□□□□□ -1.51
SNF12YNR023W DMA1P38823 416 aa5.58□□□□□ -1.52
SNF12YNR023W YGR035CP53222 116 aa5.58□□□□□ -1.52
SNF12YNR023W YLR346CQ06139 101 aa5.57□□□□□ -1.52
SNF12YNR023W ACO2P39533 789 aa5.56□□□□□ -1.52
SNF12YNR023W PAC1P39946 494 aaKnown RBP5.55□□□□□ -1.52
SNF12YNR023W MOD5P07884 428 aa5.54□□□□□ -1.52
SNF12YNR023W ERF2Q06551 359 aa5.54□□□□□ -1.52
SNF12YNR023W SRF1Q12516 437 aa5.54□□□□□ -1.52
SNF12YNR023W RGR1P19263 1082 aa5.53□□□□□ -1.52
SNF12YNR023W MSB3P48566 633 aaPredicted RBP5.53□□□□□ -1.52
SNF12YNR023W MAK21Q12176 1025 aaKnown RBP5.52□□□□□ -1.53
SNF12YNR023W UGA3P26370 528 aa5.51□□□□□ -1.53
SNF12YNR023W OPT2Q06593 877 aa5.5□□□□□ -1.53
SNF12YNR023W COX6P00427 148 aa5.49□□□□□ -1.53
SNF12YNR023W TUB4P53378 473 aa5.48□□□□□ -1.53
SNF12YNR023W PTK2P47116 818 aaKnown RBP5.47□□□□□ -1.53
SNF12YNR023W KXD1P53158 218 aa5.47□□□□□ -1.53
SNF12YNR023W SYH1Q02875 849 aaKnown RBP5.47□□□□□ -1.53
SNF12YNR023W HPF1Q05164 967 aa5.45□□□□□ -1.54
SNF12YNR023W TYW1Q08960 810 aaKnown RBP5.45□□□□□ -1.54
SNF12YNR023W YPR204WQ08995 1032 aa5.45□□□□□ -1.54
SNF12YNR023W SCW11P53189 542 aa5.45□□□□□ -1.54
SNF12YNR023W AGE1Q04412 482 aa5.45□□□□□ -1.54
SNF12YNR023W PUS1Q12211 544 aaKnown RBP5.45□□□□□ -1.54
SNF12YNR023W GLY1P37303 387 aaKnown RBP5.44□□□□□ -1.54
SNF12YNR023W YIR007WP40566 764 aa5.44□□□□□ -1.54
SNF12YNR023W ICP55P40051 511 aa5.43□□□□□ -1.54
SNF12YNR023W YPR148CQ06523 435 aa5.43□□□□□ -1.54
SNF12YNR023W MIP1P15801 1254 aa5.41□□□□□ -1.54
SNF12YNR023W RTF1P53064 558 aa5.41□□□□□ -1.54
SNF12YNR023W CLB5P30283 435 aa5.4□□□□□ -1.54
SNF12YNR023W LSB3P43603 459 aaKnown RBP5.4□□□□□ -1.54
SNF12YNR023W NUP85P46673 744 aa5.4□□□□□ -1.54
SNF12YNR023W TPD3P31383 635 aa5.39□□□□□ -1.55
SNF12YNR023W YNL115CP53925 644 aa5.39□□□□□ -1.55
SNF12YNR023W KIP2P28743 706 aa5.38□□□□□ -1.55
SNF12YNR023W HXT10P43581 546 aa5.38□□□□□ -1.55
SNF12YNR023W VPS70P47161 811 aa5.38□□□□□ -1.55
SNF12YNR023W TY1A-BLQ12266 440 aa5.37□□□□□ -1.55
SNF12YNR023W RTT106P40161 455 aa5.36□□□□□ -1.55
SNF12YNR023W PHM7Q12252 991 aa5.35□□□□□ -1.55
SNF12YNR023W PSE1P32337 1089 aaKnown RBP5.34□□□□□ -1.55
SNF12YNR023W NRD1P53617 575 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SNF12YNR023W UBP2Q01476 1272 aa5.33□□□□□ -1.56
SNF12YNR023W IXR1P33417 597 aa5.32□□□□□ -1.56
SNF12YNR023W LSC2P53312 427 aa5.32□□□□□ -1.56
SNF12YNR023W DPH6Q12429 685 aa5.32□□□□□ -1.56
SNF12YNR023W PDC1P06169 563 aaKnown RBP5.31□□□□□ -1.56
SNF12YNR023W ARG82P07250 355 aa5.29□□□□□ -1.56
SNF12YNR023W MRT4P33201 236 aaKnown RBP5.28□□□□□ -1.56
SNF12YNR023W SAS10Q12136 610 aaPredicted RBP5.28□□□□□ -1.56
SNF12YNR023W ALR1Q08269 859 aa5.28□□□□□ -1.56
SNF12YNR023W TBF1Q02457 562 aa5.26□□□□□ -1.57
SNF12YNR023W SIT4P20604 311 aa5.25□□□□□ -1.57
SNF12YNR023W ROG3P43602 733 aa5.25□□□□□ -1.57
SNF12YNR023W LYS5P50113 272 aa5.25□□□□□ -1.57
SNF12YNR023W AAD14P42884 376 aa5.24□□□□□ -1.57
SNF12YNR023W SLY41P22215 453 aa5.23□□□□□ -1.57
SNF12YNR023W RPA14P50106 137 aa5.23□□□□□ -1.57
SNF12YNR023W NSG2P53898 299 aa5.23□□□□□ -1.57
SNF12YNR023W MDJ1P35191 511 aa5.23□□□□□ -1.57
SNF12YNR023W TEA1P47988 759 aa5.23□□□□□ -1.57
SNF12YNR023W TY1A-MR1Q04215 440 aa5.23□□□□□ -1.57
SNF12YNR023W TCB1Q12466 1186 aa5.23□□□□□ -1.57
SNF12YNR023W YDL206WQ12424 762 aa5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 206.1 ms