RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W FAP1P53971 965 aa12.04□□□□□ -0.48
SNF12YNR023W MTC1P47018 478 aaKnown RBP11.94□□□□□ -0.5
SNF12YNR023W PRY3P47033 881 aa11.32□□□□□ -0.6
SNF12YNR023W AAD16Q02895 342 aa10.76□□□□□ -0.69
SNF12YNR023W PRI1P10363 409 aa10.64□□□□□ -0.71
SNF12YNR023W HAA1Q12753 694 aaKnown RBP10.57□□□□□ -0.72
SNF12YNR023W YCK3P39962 524 aa10.46□□□□□ -0.74
SNF12YNR023W ISW2Q08773 1120 aa10.21□□□□□ -0.78
SNF12YNR023W DRS1P32892 752 aaKnown RBP10.15□□□□□ -0.78
SNF12YNR023W RPG1P38249 964 aaKnown RBP10.08□□□□□ -0.8
SNF12YNR023W TSR3Q12094 313 aaKnown RBP10.03□□□□□ -0.8
SNF12YNR023W MRPL32P25348 183 aa9.71□□□□□ -0.85
SNF12YNR023W YGL015CP33199 130 aa9.59□□□□□ -0.87
SNF12YNR023W RSE1Q04693 1361 aaKnown RBP9.29□□□□□ -0.92
SNF12YNR023W DIP2Q12220 943 aaPredicted RBP9.25□□□□□ -0.93
SNF12YNR023W BUD31P25337 157 aaPredicted RBP9.2□□□□□ -0.94
SNF12YNR023W REB1P21538 810 aa9.15□□□□□ -0.94
SNF12YNR023W RPL17AP05740 184 aaKnown RBP9.04□□□□□ -0.96
SNF12YNR023W RPL17BP46990 184 aaKnown RBP9.04□□□□□ -0.96
SNF12YNR023W CDC27P38042 758 aa8.91□□□□□ -0.98
SNF12YNR023W UBP10P53874 792 aaPredicted RBP8.87□□□□□ -0.99
SNF12YNR023W MAP2P38174 421 aaKnown RBP8.8□□□□□ -1
SNF12YNR023W SIS1P25294 352 aaKnown RBP8.76□□□□□ -1.01
SNF12YNR023W UBP9P39967 754 aa8.65□□□□□ -1.03
SNF12YNR023W YKR023WP36119 530 aaKnown RBP8.63□□□□□ -1.03
SNF12YNR023W TIF4632P39936 914 aaKnown RBP8.58□□□□□ -1.04
SNF12YNR023W AVT3P36062 692 aa8.56□□□□□ -1.04
SNF12YNR023W HOP09932 586 aa8.5□□□□□ -1.05
SNF12YNR023W TGL3P40308 642 aa8.5□□□□□ -1.05
SNF12YNR023W TFC8Q12308 588 aa8.48□□□□□ -1.05
SNF12YNR023W DCD1P06773 312 aa8.47□□□□□ -1.05
SNF12YNR023W SPT21P35209 758 aa8.47□□□□□ -1.05
SNF12YNR023W SCY1P53009 804 aa8.46□□□□□ -1.05
SNF12YNR023W SLX5P32828 619 aaKnown RBP8.44□□□□□ -1.06
SNF12YNR023W BCH2P36122 765 aa8.15□□□□□ -1.1
SNF12YNR023W YBL029C-AQ3E756 94 aa8.04□□□□□ -1.12
SNF12YNR023W RIM101P33400 625 aa7.98□□□□□ -1.13
SNF12YNR023W YOR238WQ08634 303 aa7.97□□□□□ -1.13
SNF12YNR023W MST1P07236 462 aa7.95□□□□□ -1.14
SNF12YNR023W BFR2Q06631 534 aaKnown RBP7.95□□□□□ -1.14
SNF12YNR023W EPS1P40557 701 aa7.92□□□□□ -1.14
SNF12YNR023W VNX1P42839 908 aa7.9□□□□□ -1.14
SNF12YNR023W SPP1Q03012 353 aa7.89□□□□□ -1.15
SNF12YNR023W BDF1P35817 686 aa7.89□□□□□ -1.15
SNF12YNR023W YJL171CP46992 396 aa7.88□□□□□ -1.15
SNF12YNR023W WSC3Q12215 556 aa7.81□□□□□ -1.16
SNF12YNR023W NSR1P27476 414 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
SNF12YNR023W YAP5P40574 245 aa7.76□□□□□ -1.17
SNF12YNR023W AIR2Q12476 344 aaKnown RBP7.76□□□□□ -1.17
SNF12YNR023W TIF11P38912 153 aaKnown RBP7.72□□□□□ -1.17
SNF12YNR023W FKH1P40466 484 aa7.72□□□□□ -1.17
SNF12YNR023W PTP3P40048 928 aa7.71□□□□□ -1.18
SNF12YNR023W GTT3P39996 337 aa7.69□□□□□ -1.18
SNF12YNR023W YIL055CP40523 627 aaKnown RBP7.69□□□□□ -1.18
SNF12YNR023W BBC1P47068 1157 aa7.66□□□□□ -1.18
SNF12YNR023W OXP1P28273 1286 aa7.64□□□□□ -1.19
SNF12YNR023W BMT6Q12291 365 aa7.64□□□□□ -1.19
SNF12YNR023W LDB19Q12502 818 aa7.6□□□□□ -1.19
SNF12YNR023W ULI1P43604 169 aa7.56□□□□□ -1.2
SNF12YNR023W AI2P03876 854 aa7.52□□□□□ -1.21
SNF12YNR023W RSM7P47150 247 aa7.51□□□□□ -1.21
SNF12YNR023W IOC2Q12072 812 aa7.49□□□□□ -1.21
SNF12YNR023W EAP1P36041 632 aaKnown RBP7.42□□□□□ -1.22
SNF12YNR023W PIB1Q06651 286 aa7.41□□□□□ -1.22
SNF12YNR023W MSB4Q12317 492 aa7.41□□□□□ -1.22
SNF12YNR023W RTG1P32607 177 aa7.38□□□□□ -1.23
SNF12YNR023W YAH1Q12184 172 aaKnown RBP7.38□□□□□ -1.23
SNF12YNR023W NCR1Q12200 1170 aa7.36□□□□□ -1.23
SNF12YNR023W TRP5P00931 707 aaKnown RBP7.29□□□□□ -1.24
SNF12YNR023W TFG1P41895 735 aaPredicted RBP7.28□□□□□ -1.24
SNF12YNR023W SET4P42948 560 aa7.28□□□□□ -1.24
SNF12YNR023W YNL035CP53962 389 aaKnown RBP7.28□□□□□ -1.24
SNF12YNR023W SEC61P32915 480 aa7.27□□□□□ -1.25
SNF12YNR023W YOL036WQ08206 761 aa7.27□□□□□ -1.25
SNF12YNR023W BCK2P33306 851 aa7.23□□□□□ -1.25
SNF12YNR023W MRM1P25270 412 aa7.19□□□□□ -1.26
SNF12YNR023W SAP30P38429 201 aa7.15□□□□□ -1.26
SNF12YNR023W CHL1P22516 861 aaPredicted RBP7.13□□□□□ -1.27
SNF12YNR023W PSD2P53037 1138 aaKnown RBP7.13□□□□□ -1.27
SNF12YNR023W YMR1P47147 688 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SNF12YNR023W YLR271WQ06152 274 aa7.13□□□□□ -1.27
SNF12YNR023W DBP1P24784 617 aaKnown RBP7.1□□□□□ -1.27
SNF12YNR023W JIP4Q03361 876 aa7.08□□□□□ -1.28
SNF12YNR023W YDL129WQ07555 291 aa7.08□□□□□ -1.28
SNF12YNR023W VMA1P17255 1071 aaKnown RBP7.07□□□□□ -1.28
SNF12YNR023W PRE3P38624 215 aa7.07□□□□□ -1.28
SNF12YNR023W YFR006WP43590 535 aa7.06□□□□□ -1.28
SNF12YNR023W SAM3Q08986 587 aa7.05□□□□□ -1.28
SNF12YNR023W ABP1P15891 592 aaKnown RBP7.02□□□□□ -1.29
SNF12YNR023W DAN4P47179 1161 aa7.02□□□□□ -1.29
SNF12YNR023W VPS29P38759 282 aa7□□□□□ -1.29
SNF12YNR023W RTG3P38165 486 aa6.99□□□□□ -1.29
SNF12YNR023W XDJ1P39102 459 aa6.98□□□□□ -1.29
SNF12YNR023W HTA1P04911 132 aaKnown RBP6.97□□□□□ -1.29
SNF12YNR023W HTA2P04912 132 aa6.97□□□□□ -1.29
SNF12YNR023W GYP5Q12344 894 aa6.97□□□□□ -1.29
SNF12YNR023W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.97□□□□□ -1.29not detected
SNF12YNR023W VRP1P37370 817 aa6.96□□□□□ -1.29
SNF12YNR023W STS1P38637 319 aa6.96□□□□□ -1.3
SNF12YNR023W PTC4P38089 393 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms