RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C REV3P14284 1504 aa4.96□□□□□ -1.62
SHH3YMR118C CLA4P48562 842 aa4.95□□□□□ -1.62
SHH3YMR118C ENV9Q08651 330 aa4.95□□□□□ -1.62
SHH3YMR118C SIN3P22579 1536 aa4.94□□□□□ -1.62
SHH3YMR118C GCD11P32481 527 aaKnown RBP4.94□□□□□ -1.62
SHH3YMR118C YPR148CQ06523 435 aa4.94□□□□□ -1.62
SHH3YMR118C TAF2P23255 1407 aa4.93□□□□□ -1.62
SHH3YMR118C CST6P40535 587 aa4.93□□□□□ -1.62
SHH3YMR118C THO2P53552 1597 aaKnown RBP4.93□□□□□ -1.62
SHH3YMR118C CDC4P07834 779 aa4.92□□□□□ -1.62
SHH3YMR118C SPT16P32558 1035 aaKnown RBP4.92□□□□□ -1.62
SHH3YMR118C ORC6P38826 435 aa4.92□□□□□ -1.62
SHH3YMR118C NOP2P40991 618 aaKnown RBP4.92□□□□□ -1.62
SHH3YMR118C VPS70P47161 811 aa4.92□□□□□ -1.62
SHH3YMR118C SSK2P53599 1579 aa4.91□□□□□ -1.62
SHH3YMR118C UFD4P33202 1483 aa4.9□□□□□ -1.62
SHH3YMR118C COX6P00427 148 aa4.9□□□□□ -1.63
SHH3YMR118C MVP1P40959 511 aaKnown RBP4.9□□□□□ -1.63
SHH3YMR118C SEC2P17065 759 aa4.89□□□□□ -1.63
SHH3YMR118C YDR444WQ04093 687 aa4.89□□□□□ -1.63
SHH3YMR118C LAM6Q08001 693 aa4.89□□□□□ -1.63
SHH3YMR118C MAK21Q12176 1025 aaKnown RBP4.89□□□□□ -1.63
SHH3YMR118C YTA7P40340 1379 aa4.89□□□□□ -1.63
SHH3YMR118C TY1A-DR4O74302 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-HP0C2I4 478 aaKnown RBP4.88□□□□□ -1.63
SHH3YMR118C TY1A-AP0CX57 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-PR1P0CX58 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-ORP0CX59 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-PR2P0CX60 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-DR5P0CX65 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-ER2P0CX66 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-GR3P0CX67 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-LR1P0CX68 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-MR2P0CX69 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-JR2P47099 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-DR1Q03856 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-ML1Q04706 440 aaKnown RBP4.88□□□□□ -1.63
SHH3YMR118C YPR109WQ06104 294 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-BRQ12217 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-NL2Q12470 440 aa4.88□□□□□ -1.63
SHH3YMR118C TY1A-GR2Q12485 440 aa4.88□□□□□ -1.63
SHH3YMR118C POL1P13382 1468 aa4.88□□□□□ -1.63
SHH3YMR118C STU1P38198 1513 aa4.87□□□□□ -1.63
SHH3YMR118C SWR1Q05471 1514 aa4.87□□□□□ -1.63
SHH3YMR118C FRK1Q03002 865 aaPredicted RBP4.87□□□□□ -1.63
SHH3YMR118C MTC5Q03897 1148 aa4.87□□□□□ -1.63
SHH3YMR118C MYO2P19524 1574 aaKnown RBP4.87□□□□□ -1.63
SHH3YMR118C RGR1P19263 1082 aa4.86□□□□□ -1.63
SHH3YMR118C PAT1P25644 796 aaKnown RBP4.86□□□□□ -1.63
SHH3YMR118C RRN7P40992 514 aa4.86□□□□□ -1.63
SHH3YMR118C SAS10Q12136 610 aaPredicted RBP4.86□□□□□ -1.63
SHH3YMR118C TRM732Q03496 1420 aa4.86□□□□□ -1.63
SHH3YMR118C IKI3Q06706 1349 aaKnown RBP4.85□□□□□ -1.63
SHH3YMR118C BDP1P46678 594 aa4.84□□□□□ -1.63
SHH3YMR118C YDL176WQ12027 708 aa4.84□□□□□ -1.63
SHH3YMR118C HED1Q03937 162 aa4.83□□□□□ -1.64
SHH3YMR118C LCB5Q06147 687 aaKnown RBP4.83□□□□□ -1.64
SHH3YMR118C MON2P48563 1636 aaPredicted RBP4.83□□□□□ -1.64
SHH3YMR118C SPP41P38904 1435 aa4.82□□□□□ -1.64
SHH3YMR118C KEX2P13134 814 aa4.81□□□□□ -1.64
SHH3YMR118C BPT1P14772 1559 aa4.81□□□□□ -1.64
SHH3YMR118C ESP1Q03018 1630 aa4.8□□□□□ -1.64
SHH3YMR118C ERF2Q06551 359 aa4.8□□□□□ -1.64
SHH3YMR118C MYO4P32492 1471 aa4.8□□□□□ -1.64
SHH3YMR118C YPK9Q12697 1472 aa4.8□□□□□ -1.64
SHH3YMR118C BUD4P47136 1447 aa4.8□□□□□ -1.64
SHH3YMR118C ECM5Q03214 1411 aa4.8□□□□□ -1.64
SHH3YMR118C DNA2P38859 1522 aa4.78□□□□□ -1.64
SHH3YMR118C YOR1P53049 1477 aa4.78□□□□□ -1.64
SHH3YMR118C SCC2Q04002 1493 aa4.78□□□□□ -1.64
SHH3YMR118C TAF7Q05021 590 aa4.78□□□□□ -1.64
SHH3YMR118C PBS2P08018 668 aa4.77□□□□□ -1.65
SHH3YMR118C ASH1P34233 588 aa4.77□□□□□ -1.65
SHH3YMR118C CKB1P43639 278 aa4.76□□□□□ -1.65
SHH3YMR118C SSM4P40318 1319 aa4.75□□□□□ -1.65
SHH3YMR118C SMC4Q12267 1418 aa4.75□□□□□ -1.65
SHH3YMR118C PSE1P32337 1089 aaKnown RBP4.75□□□□□ -1.65
SHH3YMR118C PAC1P39946 494 aaKnown RBP4.75□□□□□ -1.65
SHH3YMR118C RKR1Q04781 1562 aa4.74□□□□□ -1.65
SHH3YMR118C NUP170P38181 1502 aa4.74□□□□□ -1.65
SHH3YMR118C ENP1P38333 483 aaKnown RBP4.74□□□□□ -1.65
SHH3YMR118C RRD1P40454 393 aaKnown RBP4.74□□□□□ -1.65
SHH3YMR118C STH1P32597 1359 aa4.74□□□□□ -1.65
SHH3YMR118C AFT1P22149 690 aa4.73□□□□□ -1.65
SHH3YMR118C CLB5P30283 435 aa4.73□□□□□ -1.65
SHH3YMR118C POL5P39985 1022 aaKnown RBP4.73□□□□□ -1.65
SHH3YMR118C HST3P53687 447 aa4.73□□□□□ -1.65
SHH3YMR118C SNQ2P32568 1501 aaKnown RBP4.72□□□□□ -1.65
SHH3YMR118C MOD5P07884 428 aa4.72□□□□□ -1.65
SHH3YMR118C TUB4P53378 473 aa4.72□□□□□ -1.65
SHH3YMR118C PUS5Q06244 254 aa4.72□□□□□ -1.65
SHH3YMR118C MET32Q12041 191 aa4.72□□□□□ -1.65
SHH3YMR118C MAM3Q12296 706 aa4.72□□□□□ -1.65
SHH3YMR118C ATG2P53855 1592 aa4.72□□□□□ -1.65
SHH3YMR118C PAN1P32521 1480 aa4.71□□□□□ -1.66
SHH3YMR118C AGE1Q04412 482 aa4.71□□□□□ -1.66
SHH3YMR118C TOP2P06786 1428 aaKnown RBP4.71□□□□□ -1.66
SHH3YMR118C RPO31P04051 1460 aa4.7□□□□□ -1.66
SHH3YMR118C YNL115CP53925 644 aa4.7□□□□□ -1.66
SHH3YMR118C GEA1P47102 1408 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms