RNA–Protein interactions for RNA: YLR104W

LCL2, Transcript of Putative protein of unknown function, yeastyeast

Gene LCL2, Length 396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCL2YLR104W TY1A-MR2P0CX69 440 aa5.8□□□□□ -1.48
LCL2YLR104W TY1A-JR2P47099 440 aa5.8□□□□□ -1.48
LCL2YLR104W TY1A-DR1Q03856 440 aa5.8□□□□□ -1.48
LCL2YLR104W TY1A-ML1Q04706 440 aaKnown RBP5.8□□□□□ -1.48
LCL2YLR104W TY1A-BRQ12217 440 aa5.8□□□□□ -1.48
LCL2YLR104W TY1A-NL2Q12470 440 aa5.8□□□□□ -1.48
LCL2YLR104W TY1A-GR2Q12485 440 aa5.8□□□□□ -1.48
LCL2YLR104W UBP14P38237 781 aaKnown RBP5.79□□□□□ -1.48
LCL2YLR104W BNI1P41832 1953 aa5.77□□□□□ -1.49
LCL2YLR104W SEC2P17065 759 aa5.77□□□□□ -1.49
LCL2YLR104W NUD1P32336 851 aa5.77□□□□□ -1.49
LCL2YLR104W RRD1P40454 393 aaKnown RBP5.77□□□□□ -1.49
LCL2YLR104W HED1Q03937 162 aa5.77□□□□□ -1.49
LCL2YLR104W SPT16P32558 1035 aaKnown RBP5.75□□□□□ -1.49
LCL2YLR104W ASH1P34233 588 aa5.75□□□□□ -1.49
LCL2YLR104W VHR2P40041 505 aa5.75□□□□□ -1.49
LCL2YLR104W MET32Q12041 191 aa5.75□□□□□ -1.49
LCL2YLR104W ITT1Q04638 464 aa5.73□□□□□ -1.49
LCL2YLR104W DNF1P32660 1571 aa5.72□□□□□ -1.49
LCL2YLR104W TY1B-DR4Q07793 1604 aa5.71□□□□□ -1.5
LCL2YLR104W RAD54P32863 898 aa5.71□□□□□ -1.5
LCL2YLR104W IRC20Q06554 1556 aa5.71□□□□□ -1.5
LCL2YLR104W RPP1BP10622 106 aaKnown RBP5.7□□□□□ -1.5
LCL2YLR104W GCD11P32481 527 aaKnown RBP5.7□□□□□ -1.5
LCL2YLR104W CAF120P53836 1060 aa5.7□□□□□ -1.5
LCL2YLR104W GAP1P19145 602 aaPredicted RBP5.68□□□□□ -1.5
LCL2YLR104W AFT1P22149 690 aa5.68□□□□□ -1.5
LCL2YLR104W TRK2P28584 889 aa5.68□□□□□ -1.5
LCL2YLR104W RRN7P40992 514 aa5.68□□□□□ -1.5
LCL2YLR104W PEX21P50091 288 aa5.68□□□□□ -1.5
LCL2YLR104W TUM1Q08686 304 aaKnown RBP5.66□□□□□ -1.5
LCL2YLR104W MMS1Q06211 1407 aa5.65□□□□□ -1.5
LCL2YLR104W NPL4P33755 580 aa5.65□□□□□ -1.5
LCL2YLR104W ACO2P39533 789 aa5.64□□□□□ -1.51
LCL2YLR104W YJR115WP47152 169 aa5.64□□□□□ -1.51
LCL2YLR104W LTE1P07866 1435 aa5.64□□□□□ -1.51
LCL2YLR104W HST3P53687 447 aa5.63□□□□□ -1.51
LCL2YLR104W MDS3P53094 1487 aa5.63□□□□□ -1.51
LCL2YLR104W BPT1P14772 1559 aa5.63□□□□□ -1.51
LCL2YLR104W TFB4Q12004 338 aa5.62□□□□□ -1.51
LCL2YLR104W MYO2P19524 1574 aaKnown RBP5.62□□□□□ -1.51
LCL2YLR104W YGR035CP53222 116 aa5.6□□□□□ -1.51
LCL2YLR104W TAF2P23255 1407 aa5.58□□□□□ -1.52
LCL2YLR104W CSC1Q06538 782 aa5.58□□□□□ -1.52
LCL2YLR104W LSB3P43603 459 aaKnown RBP5.57□□□□□ -1.52
LCL2YLR104W YDR090CQ03193 310 aa5.57□□□□□ -1.52
LCL2YLR104W TCB3Q03640 1545 aaKnown RBP5.55□□□□□ -1.52
LCL2YLR104W HPF1Q05164 967 aa5.55□□□□□ -1.52
LCL2YLR104W RPA190P10964 1664 aaKnown RBP5.54□□□□□ -1.52
LCL2YLR104W PUS5Q06244 254 aa5.54□□□□□ -1.52
LCL2YLR104W MOD5P07884 428 aa5.53□□□□□ -1.52
LCL2YLR104W PAT1P25644 796 aaKnown RBP5.53□□□□□ -1.52
LCL2YLR104W NRD1P53617 575 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
LCL2YLR104W BUD4P47136 1447 aa5.53□□□□□ -1.52
LCL2YLR104W CDC25P04821 1589 aa5.51□□□□□ -1.53
LCL2YLR104W YIR007WP40566 764 aa5.51□□□□□ -1.53
LCL2YLR104W OPT2Q06593 877 aa5.51□□□□□ -1.53
LCL2YLR104W HIR3P47171 1648 aa5.51□□□□□ -1.53
LCL2YLR104W PEP1P32319 1579 aa5.5□□□□□ -1.53
LCL2YLR104W PAC1P39946 494 aaKnown RBP5.5□□□□□ -1.53
LCL2YLR104W DMA1P38823 416 aa5.49□□□□□ -1.53
LCL2YLR104W ICP55P40051 511 aa5.48□□□□□ -1.53
LCL2YLR104W ERF2Q06551 359 aa5.48□□□□□ -1.53
LCL2YLR104W ORC6P38826 435 aa5.47□□□□□ -1.53
LCL2YLR104W YCF1P39109 1515 aaKnown RBP5.47□□□□□ -1.53
LCL2YLR104W THO2P53552 1597 aaKnown RBP5.46□□□□□ -1.53
LCL2YLR104W PUS1Q12211 544 aaKnown RBP5.46□□□□□ -1.54
LCL2YLR104W KIC1P38692 1080 aa5.45□□□□□ -1.54
LCL2YLR104W GEA2P39993 1459 aaKnown RBP5.45□□□□□ -1.54
LCL2YLR104W YOR093CQ12275 1648 aa5.45□□□□□ -1.54
LCL2YLR104W MSB3P48566 633 aaPredicted RBP5.44□□□□□ -1.54
LCL2YLR104W KEX2P13134 814 aa5.43□□□□□ -1.54
LCL2YLR104W RQC2Q12532 1038 aaKnown RBP5.43□□□□□ -1.54
LCL2YLR104W MET5P47169 1442 aa5.41□□□□□ -1.54
LCL2YLR104W GLY1P37303 387 aaKnown RBP5.41□□□□□ -1.54
LCL2YLR104W MVP1P40959 511 aaKnown RBP5.4□□□□□ -1.54
LCL2YLR104W PTK2P47116 818 aaKnown RBP5.4□□□□□ -1.54
LCL2YLR104W RPO31P04051 1460 aa5.39□□□□□ -1.55
LCL2YLR104W SET1P38827 1080 aaKnown RBP5.39□□□□□ -1.55
LCL2YLR104W YPR204WQ08995 1032 aa5.39□□□□□ -1.55
LCL2YLR104W ESC1Q03661 1658 aaKnown RBP5.38□□□□□ -1.55
LCL2YLR104W AGE1Q04412 482 aa5.38□□□□□ -1.55
LCL2YLR104W MDJ1P35191 511 aa5.37□□□□□ -1.55
LCL2YLR104W YPR109WQ06104 294 aa5.37□□□□□ -1.55
LCL2YLR104W YLR346CQ06139 101 aa5.37□□□□□ -1.55
LCL2YLR104W TY1A-BLQ12266 440 aa5.37□□□□□ -1.55
LCL2YLR104W SCW11P53189 542 aa5.36□□□□□ -1.55
LCL2YLR104W DNF2Q12675 1612 aa5.35□□□□□ -1.55
LCL2YLR104W UGA3P26370 528 aa5.33□□□□□ -1.56
LCL2YLR104W TUB4P53378 473 aa5.33□□□□□ -1.56
LCL2YLR104W PHM7Q12252 991 aa5.33□□□□□ -1.56
LCL2YLR104W GLN1P32288 370 aaKnown RBP5.32□□□□□ -1.56
LCL2YLR104W SRF1Q12516 437 aa5.31□□□□□ -1.56
LCL2YLR104W MIP1P15801 1254 aa5.3□□□□□ -1.56
LCL2YLR104W RGR1P19263 1082 aa5.3□□□□□ -1.56
LCL2YLR104W HSL1P34244 1518 aa5.29□□□□□ -1.56
LCL2YLR104W NUP85P46673 744 aa5.29□□□□□ -1.56
LCL2YLR104W TYW1Q08960 810 aaKnown RBP5.29□□□□□ -1.56
LCL2YLR104W SPT6P23615 1451 aaKnown RBP5.28□□□□□ -1.56
LCL2YLR104W IFH1P39520 1085 aa5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms