RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeastyeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT109YLL002W TY1A-MR2P0CX69 440 aa6.63□□□□□ -1.35
RTT109YLL002W SEC2P17065 759 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-JR2P47099 440 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-DR1Q03856 440 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-ML1Q04706 440 aaKnown RBP6.63□□□□□ -1.35
RTT109YLL002W CSC1Q06538 782 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-BRQ12217 440 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-NL2Q12470 440 aa6.63□□□□□ -1.35
RTT109YLL002W TY1A-GR2Q12485 440 aa6.63□□□□□ -1.35
RTT109YLL002W CLA4P48562 842 aa6.62□□□□□ -1.35
RTT109YLL002W MAM3Q12296 706 aa6.62□□□□□ -1.35
RTT109YLL002W MVP1P40959 511 aaKnown RBP6.61□□□□□ -1.35
RTT109YLL002W TFB4Q12004 338 aa6.61□□□□□ -1.35
RTT109YLL002W DSF2P38213 736 aa6.6□□□□□ -1.35
RTT109YLL002W CST6P40535 587 aa6.6□□□□□ -1.35
RTT109YLL002W YPL062WQ02781 134 aa6.6□□□□□ -1.35
RTT109YLL002W MAK21Q12176 1025 aaKnown RBP6.6□□□□□ -1.35
RTT109YLL002W COX6P00427 148 aa6.59□□□□□ -1.35
RTT109YLL002W GCD11P32481 527 aaKnown RBP6.59□□□□□ -1.35
RTT109YLL002W AIR1P40507 360 aaKnown RBP6.59□□□□□ -1.35
RTT109YLL002W LEO1P38439 464 aa6.58□□□□□ -1.36
RTT109YLL002W RGR1P19263 1082 aa6.57□□□□□ -1.36
RTT109YLL002W YPR109WQ06104 294 aa6.57□□□□□ -1.36
RTT109YLL002W YEL077CQ3E7X8 1277 aa6.57□□□□□ -1.36
RTT109YLL002W IES2P40154 320 aa6.56□□□□□ -1.36
RTT109YLL002W ERF2Q06551 359 aa6.56□□□□□ -1.36
RTT109YLL002W MRF1P30775 413 aaPredicted RBP6.53□□□□□ -1.36
RTT109YLL002W NPL4P33755 580 aa6.53□□□□□ -1.36
RTT109YLL002W RPN1P38764 993 aaKnown RBP6.53□□□□□ -1.36
RTT109YLL002W TY1B-DR4Q07793 1604 aa6.53□□□□□ -1.36
RTT109YLL002W ERG12P07277 443 aa6.52□□□□□ -1.37
RTT109YLL002W RRN7P40992 514 aa6.51□□□□□ -1.37
RTT109YLL002W KEX2P13134 814 aa6.5□□□□□ -1.37
RTT109YLL002W FRK1Q03002 865 aaPredicted RBP6.5□□□□□ -1.37
RTT109YLL002W LAM6Q08001 693 aa6.5□□□□□ -1.37
RTT109YLL002W SPT16P32558 1035 aaKnown RBP6.5□□□□□ -1.37
RTT109YLL002W YNR021WP53723 404 aaKnown RBP6.48□□□□□ -1.37
RTT109YLL002W DIT2P21595 489 aa6.47□□□□□ -1.37
RTT109YLL002W BDP1P46678 594 aa6.47□□□□□ -1.37
RTT109YLL002W GLC3P32775 704 aa6.46□□□□□ -1.38
RTT109YLL002W NUP42P49686 430 aaKnown RBP6.46□□□□□ -1.38
RTT109YLL002W ATF2P53296 535 aa6.45□□□□□ -1.38
RTT109YLL002W PAC1P39946 494 aaKnown RBP6.43□□□□□ -1.38
RTT109YLL002W REV3P14284 1504 aa6.42□□□□□ -1.38
RTT109YLL002W PSE1P32337 1089 aaKnown RBP6.4□□□□□ -1.39
RTT109YLL002W BRE2P43132 505 aa6.4□□□□□ -1.39
RTT109YLL002W AGE1Q04412 482 aa6.39□□□□□ -1.39
RTT109YLL002W AIM7Q12156 149 aa6.39□□□□□ -1.39
RTT109YLL002W KIN1P13185 1064 aa6.38□□□□□ -1.39
RTT109YLL002W PUS5Q06244 254 aa6.38□□□□□ -1.39
RTT109YLL002W GAR1P28007 205 aaKnown RBP6.37□□□□□ -1.39
RTT109YLL002W TUB4P53378 473 aa6.37□□□□□ -1.39
RTT109YLL002W MOD5P07884 428 aa6.35□□□□□ -1.39
RTT109YLL002W CDC4P07834 779 aa6.34□□□□□ -1.39
RTT109YLL002W PAT1P25644 796 aaKnown RBP6.33□□□□□ -1.4
RTT109YLL002W TEA1P47988 759 aa6.33□□□□□ -1.4
RTT109YLL002W MET32Q12041 191 aa6.33□□□□□ -1.4
RTT109YLL002W CLB5P30283 435 aa6.32□□□□□ -1.4
RTT109YLL002W NIS1P53939 407 aa6.31□□□□□ -1.4
RTT109YLL002W HED1Q03937 162 aa6.31□□□□□ -1.4
RTT109YLL002W ECM5Q03214 1411 aa6.31□□□□□ -1.4
RTT109YLL002W TCB3Q03640 1545 aaKnown RBP6.31□□□□□ -1.4
RTT109YLL002W MET22P32179 357 aa6.29□□□□□ -1.4
RTT109YLL002W GCR2Q01722 534 aa6.29□□□□□ -1.4
RTT109YLL002W ASH1P34233 588 aa6.28□□□□□ -1.4
RTT109YLL002W YNL115CP53925 644 aa6.28□□□□□ -1.4
RTT109YLL002W SIT4P20604 311 aa6.27□□□□□ -1.41
RTT109YLL002W YMR196WQ04336 1088 aa6.27□□□□□ -1.41
RTT109YLL002W MDS3P53094 1487 aa6.26□□□□□ -1.41
RTT109YLL002W HGH1P48362 394 aaKnown RBP6.25□□□□□ -1.41
RTT109YLL002W SCJ1P25303 377 aa6.25□□□□□ -1.41
RTT109YLL002W GBP2P25555 427 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
RTT109YLL002W DMA2P53924 522 aa6.24□□□□□ -1.41
RTT109YLL002W GUA1P38625 525 aaKnown RBP6.23□□□□□ -1.41
RTT109YLL002W RTF1P53064 558 aa6.23□□□□□ -1.41
RTT109YLL002W FPK1P53739 893 aa6.23□□□□□ -1.41
RTT109YLL002W SSA2P10592 639 aaKnown RBP6.22□□□□□ -1.41
RTT109YLL002W CSN12P47130 423 aa6.22□□□□□ -1.41
RTT109YLL002W SLY41P22215 453 aa6.21□□□□□ -1.42
RTT109YLL002W TAF7Q05021 590 aa6.21□□□□□ -1.42
RTT109YLL002W BNI1P41832 1953 aa6.21□□□□□ -1.42
RTT109YLL002W IRC20Q06554 1556 aa6.2□□□□□ -1.42
RTT109YLL002W PDC1P06169 563 aaKnown RBP6.2□□□□□ -1.42
RTT109YLL002W AFT1P22149 690 aa6.2□□□□□ -1.42
RTT109YLL002W ENV9Q08651 330 aa6.2□□□□□ -1.42
RTT109YLL002W GLN1P32288 370 aaKnown RBP6.19□□□□□ -1.42
RTT109YLL002W BRL1P38770 471 aa6.19□□□□□ -1.42
RTT109YLL002W YJR115WP47152 169 aa6.19□□□□□ -1.42
RTT109YLL002W YDR444WQ04093 687 aa6.19□□□□□ -1.42
RTT109YLL002W TYW1Q08960 810 aaKnown RBP6.19□□□□□ -1.42
RTT109YLL002W HXT10P43581 546 aa6.18□□□□□ -1.42
RTT109YLL002W HST3P53687 447 aa6.18□□□□□ -1.42
RTT109YLL002W HPC2Q01448 625 aa6.17□□□□□ -1.42
RTT109YLL002W MMP1Q12372 583 aa6.17□□□□□ -1.42
RTT109YLL002W THO2P53552 1597 aaKnown RBP6.16□□□□□ -1.42
RTT109YLL002W KXD1P53158 218 aa6.16□□□□□ -1.42
RTT109YLL002W HST2P53686 357 aa6.16□□□□□ -1.42
RTT109YLL002W YDL176WQ12027 708 aa6.16□□□□□ -1.42
RTT109YLL002W RRD1P40454 393 aaKnown RBP6.15□□□□□ -1.43
RTT109YLL002W BUD4P47136 1447 aa6.15□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms