RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W TY1A-PR1P0CX58 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-ORP0CX59 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-PR2P0CX60 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-DR5P0CX65 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-ER2P0CX66 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-GR3P0CX67 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-LR1P0CX68 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-MR2P0CX69 440 aa6.06□□□□□ -1.44
PFD1YJL179W PAT1P25644 796 aaKnown RBP6.06□□□□□ -1.44
PFD1YJL179W TY1A-JR2P47099 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-DR1Q03856 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-ML1Q04706 440 aaKnown RBP6.06□□□□□ -1.44
PFD1YJL179W TY1A-BRQ12217 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-NL2Q12470 440 aa6.06□□□□□ -1.44
PFD1YJL179W TY1A-GR2Q12485 440 aa6.06□□□□□ -1.44
PFD1YJL179W SEC2P17065 759 aa6.05□□□□□ -1.44
PFD1YJL179W SET1P38827 1080 aaKnown RBP6.04□□□□□ -1.44
PFD1YJL179W IFH1P39520 1085 aa6.03□□□□□ -1.44
PFD1YJL179W RRN7P40992 514 aa6.03□□□□□ -1.44
PFD1YJL179W YDR090CQ03193 310 aa6.03□□□□□ -1.44
PFD1YJL179W ASH1P34233 588 aa6.01□□□□□ -1.45
PFD1YJL179W AFT1P22149 690 aa6□□□□□ -1.45
PFD1YJL179W HST3P53687 447 aa6□□□□□ -1.45
PFD1YJL179W RRD1P40454 393 aaKnown RBP5.98□□□□□ -1.45
PFD1YJL179W MET32Q12041 191 aa5.97□□□□□ -1.45
PFD1YJL179W ORC6P38826 435 aa5.93□□□□□ -1.46
PFD1YJL179W YJR115WP47152 169 aa5.9□□□□□ -1.46
PFD1YJL179W TRK2P28584 889 aa5.88□□□□□ -1.47
PFD1YJL179W ACO2P39533 789 aa5.88□□□□□ -1.47
PFD1YJL179W MVP1P40959 511 aaKnown RBP5.88□□□□□ -1.47
PFD1YJL179W CAF120P53836 1060 aa5.88□□□□□ -1.47
PFD1YJL179W MOD5P07884 428 aa5.87□□□□□ -1.47
PFD1YJL179W REF2P42073 533 aaPredicted RBP5.85□□□□□ -1.47
PFD1YJL179W YPR109WQ06104 294 aa5.85□□□□□ -1.47
PFD1YJL179W MSB3P48566 633 aaPredicted RBP5.83□□□□□ -1.48
PFD1YJL179W YGR035CP53222 116 aa5.83□□□□□ -1.48
PFD1YJL179W KEX2P13134 814 aa5.82□□□□□ -1.48
PFD1YJL179W YLR346CQ06139 101 aa5.82□□□□□ -1.48
PFD1YJL179W PUS5Q06244 254 aa5.82□□□□□ -1.48
PFD1YJL179W RGR1P19263 1082 aa5.81□□□□□ -1.48
PFD1YJL179W PAC1P39946 494 aaKnown RBP5.81□□□□□ -1.48
PFD1YJL179W ERF2Q06551 359 aa5.79□□□□□ -1.48
PFD1YJL179W OPT2Q06593 877 aa5.78□□□□□ -1.48
PFD1YJL179W MAK21Q12176 1025 aaKnown RBP5.78□□□□□ -1.48
PFD1YJL179W COX6P00427 148 aa5.76□□□□□ -1.49
PFD1YJL179W TUB4P53378 473 aa5.75□□□□□ -1.49
PFD1YJL179W UGA3P26370 528 aa5.74□□□□□ -1.49
PFD1YJL179W AGE1Q04412 482 aa5.74□□□□□ -1.49
PFD1YJL179W HPF1Q05164 967 aa5.74□□□□□ -1.49
PFD1YJL179W SRF1Q12516 437 aa5.74□□□□□ -1.49
PFD1YJL179W GLY1P37303 387 aaKnown RBP5.73□□□□□ -1.49
PFD1YJL179W ICP55P40051 511 aa5.73□□□□□ -1.49
PFD1YJL179W PTK2P47116 818 aaKnown RBP5.73□□□□□ -1.49
PFD1YJL179W YPR204WQ08995 1032 aa5.73□□□□□ -1.49
PFD1YJL179W SYH1Q02875 849 aaKnown RBP5.72□□□□□ -1.49
PFD1YJL179W PUS1Q12211 544 aaKnown RBP5.71□□□□□ -1.5
PFD1YJL179W TPD3P31383 635 aa5.7□□□□□ -1.5
PFD1YJL179W YIR007WP40566 764 aa5.7□□□□□ -1.5
PFD1YJL179W SCW11P53189 542 aa5.7□□□□□ -1.5
PFD1YJL179W YPR148CQ06523 435 aa5.7□□□□□ -1.5
PFD1YJL179W LSB3P43603 459 aaKnown RBP5.69□□□□□ -1.5
PFD1YJL179W NUP85P46673 744 aa5.69□□□□□ -1.5
PFD1YJL179W RTF1P53064 558 aa5.69□□□□□ -1.5
PFD1YJL179W KXD1P53158 218 aa5.69□□□□□ -1.5
PFD1YJL179W TYW1Q08960 810 aaKnown RBP5.67□□□□□ -1.5
PFD1YJL179W MIP1P15801 1254 aa5.66□□□□□ -1.5
PFD1YJL179W TY1A-BLQ12266 440 aa5.66□□□□□ -1.5
PFD1YJL179W CLB5P30283 435 aa5.65□□□□□ -1.5
PFD1YJL179W RTT106P40161 455 aa5.65□□□□□ -1.5
PFD1YJL179W HXT10P43581 546 aa5.64□□□□□ -1.51
PFD1YJL179W YNL115CP53925 644 aa5.63□□□□□ -1.51
PFD1YJL179W PHM7Q12252 991 aa5.63□□□□□ -1.51
PFD1YJL179W DPH6Q12429 685 aa5.61□□□□□ -1.51
PFD1YJL179W PSE1P32337 1089 aaKnown RBP5.6□□□□□ -1.51
PFD1YJL179W NRD1P53617 575 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51 RIP-Chip
PFD1YJL179W UBP2Q01476 1272 aa5.59□□□□□ -1.51
PFD1YJL179W KIP2P28743 706 aa5.58□□□□□ -1.52
PFD1YJL179W MRT4P33201 236 aaKnown RBP5.58□□□□□ -1.52
PFD1YJL179W PDC1P06169 563 aaKnown RBP5.57□□□□□ -1.52
PFD1YJL179W VPS70P47161 811 aa5.56□□□□□ -1.52
PFD1YJL179W LSC2P53312 427 aa5.56□□□□□ -1.52
PFD1YJL179W SIT4P20604 311 aa5.54□□□□□ -1.52
PFD1YJL179W IXR1P33417 597 aa5.54□□□□□ -1.52
PFD1YJL179W ARG82P07250 355 aa5.52□□□□□ -1.53
PFD1YJL179W LYS5P50113 272 aa5.52□□□□□ -1.53
PFD1YJL179W ROG3P43602 733 aa5.51□□□□□ -1.53
PFD1YJL179W ALR1Q08269 859 aa5.51□□□□□ -1.53
PFD1YJL179W TY1A-MR1Q04215 440 aa5.5□□□□□ -1.53
PFD1YJL179W MDJ1P35191 511 aa5.49□□□□□ -1.53
PFD1YJL179W AAD14P42884 376 aa5.49□□□□□ -1.53
PFD1YJL179W RPA14P50106 137 aa5.49□□□□□ -1.53
PFD1YJL179W YPR097WQ06839 1073 aa5.48□□□□□ -1.53
PFD1YJL179W OSH7P38755 437 aa5.47□□□□□ -1.53
PFD1YJL179W YJR098CP47139 656 aa5.47□□□□□ -1.53
PFD1YJL179W NSG2P53898 299 aa5.47□□□□□ -1.53
PFD1YJL179W JJJ3P47138 172 aa5.46□□□□□ -1.54
PFD1YJL179W TCB1Q12466 1186 aa5.46□□□□□ -1.54
PFD1YJL179W CCT8P47079 568 aaKnown RBP5.45□□□□□ -1.54
PFD1YJL179W CCP1P00431 361 aa5.44□□□□□ -1.54
PFD1YJL179W TEA1P47988 759 aa5.44□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms