RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W FAP1P53971 965 aa12.56□□□□□ -0.4
PFD1YJL179W MTC1P47018 478 aaKnown RBP12.53□□□□□ -0.4
PFD1YJL179W PRY3P47033 881 aa11.84□□□□□ -0.51
PFD1YJL179W AAD16Q02895 342 aa11.31□□□□□ -0.6
PFD1YJL179W PRI1P10363 409 aa11.21□□□□□ -0.61
PFD1YJL179W HAA1Q12753 694 aaKnown RBP11.11□□□□□ -0.63
PFD1YJL179W YCK3P39962 524 aa11.07□□□□□ -0.64
PFD1YJL179W ISW2Q08773 1120 aa10.68□□□□□ -0.7
PFD1YJL179W RPG1P38249 964 aaKnown RBP10.55□□□□□ -0.72
PFD1YJL179W DRS1P32892 752 aaKnown RBP10.54□□□□□ -0.72
PFD1YJL179W TSR3Q12094 313 aaKnown RBP10.49□□□□□ -0.73
PFD1YJL179W MRPL32P25348 183 aa10.16□□□□□ -0.78
PFD1YJL179W YGL015CP33199 130 aa10.08□□□□□ -0.8
PFD1YJL179W BUD31P25337 157 aaPredicted RBP9.72□□□□□ -0.85
PFD1YJL179W RSE1Q04693 1361 aaKnown RBP9.69□□□□□ -0.86
PFD1YJL179W DIP2Q12220 943 aaPredicted RBP9.67□□□□□ -0.86
PFD1YJL179W REB1P21538 810 aa9.52□□□□□ -0.89
PFD1YJL179W RPL17AP05740 184 aaKnown RBP9.42□□□□□ -0.9
PFD1YJL179W RPL17BP46990 184 aaKnown RBP9.42□□□□□ -0.9
PFD1YJL179W CDC27P38042 758 aa9.37□□□□□ -0.91
PFD1YJL179W UBP10P53874 792 aaPredicted RBP9.34□□□□□ -0.91
PFD1YJL179W MAP2P38174 421 aaKnown RBP9.23□□□□□ -0.93
PFD1YJL179W SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.94
PFD1YJL179W YKR023WP36119 530 aaKnown RBP9.08□□□□□ -0.96
PFD1YJL179W UBP9P39967 754 aa9.07□□□□□ -0.96
PFD1YJL179W TIF4632P39936 914 aaKnown RBP9□□□□□ -0.97
PFD1YJL179W AVT3P36062 692 aa8.98□□□□□ -0.97
PFD1YJL179W TGL3P40308 642 aa8.96□□□□□ -0.98
PFD1YJL179W SPT21P35209 758 aa8.93□□□□□ -0.98
PFD1YJL179W TFC8Q12308 588 aa8.91□□□□□ -0.98
PFD1YJL179W HOP09932 586 aa8.88□□□□□ -0.99
PFD1YJL179W SCY1P53009 804 aa8.85□□□□□ -0.99
PFD1YJL179W DCD1P06773 312 aa8.84□□□□□ -0.99
PFD1YJL179W SLX5P32828 619 aaKnown RBP8.84□□□□□ -0.99
PFD1YJL179W BCH2P36122 765 aa8.57□□□□□ -1.04
PFD1YJL179W MST1P07236 462 aa8.44□□□□□ -1.06
PFD1YJL179W YBL029C-AQ3E756 94 aa8.44□□□□□ -1.06
PFD1YJL179W RIM101P33400 625 aa8.38□□□□□ -1.07
PFD1YJL179W YOR238WQ08634 303 aa8.36□□□□□ -1.07
PFD1YJL179W VNX1P42839 908 aa8.32□□□□□ -1.08
PFD1YJL179W BDF1P35817 686 aa8.28□□□□□ -1.08
PFD1YJL179W EPS1P40557 701 aa8.28□□□□□ -1.08
PFD1YJL179W SPP1Q03012 353 aa8.26□□□□□ -1.09
PFD1YJL179W NSR1P27476 414 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09 RIP-Chip
PFD1YJL179W YJL171CP46992 396 aa8.23□□□□□ -1.09
PFD1YJL179W BFR2Q06631 534 aaKnown RBP8.22□□□□□ -1.09
PFD1YJL179W AIR2Q12476 344 aaKnown RBP8.19□□□□□ -1.1
PFD1YJL179W FKH1P40466 484 aa8.14□□□□□ -1.11
PFD1YJL179W YAP5P40574 245 aa8.14□□□□□ -1.11
PFD1YJL179W WSC3Q12215 556 aa8.13□□□□□ -1.11
PFD1YJL179W TIF11P38912 153 aaKnown RBP8.1□□□□□ -1.11
PFD1YJL179W OXP1P28273 1286 aa8.02□□□□□ -1.13
PFD1YJL179W BMT6Q12291 365 aa8.01□□□□□ -1.13
PFD1YJL179W PTP3P40048 928 aa8□□□□□ -1.13
PFD1YJL179W GTT3P39996 337 aa7.99□□□□□ -1.13
PFD1YJL179W BBC1P47068 1157 aa7.99□□□□□ -1.13
PFD1YJL179W YIL055CP40523 627 aaKnown RBP7.98□□□□□ -1.13
PFD1YJL179W LDB19Q12502 818 aa7.97□□□□□ -1.13
PFD1YJL179W ULI1P43604 169 aa7.92□□□□□ -1.14
PFD1YJL179W IOC2Q12072 812 aa7.9□□□□□ -1.14
PFD1YJL179W AI2P03876 854 aa7.85□□□□□ -1.15
PFD1YJL179W RSM7P47150 247 aa7.85□□□□□ -1.15
PFD1YJL179W EAP1P36041 632 aaKnown RBP7.79□□□□□ -1.16
PFD1YJL179W MSB4Q12317 492 aa7.79□□□□□ -1.16
PFD1YJL179W RTG1P32607 177 aa7.73□□□□□ -1.17
PFD1YJL179W NCR1Q12200 1170 aa7.72□□□□□ -1.17
PFD1YJL179W PIB1Q06651 286 aa7.7□□□□□ -1.18
PFD1YJL179W SEC61P32915 480 aa7.66□□□□□ -1.18
PFD1YJL179W TRP5P00931 707 aaKnown RBP7.64□□□□□ -1.19
PFD1YJL179W YNL035CP53962 389 aaKnown RBP7.64□□□□□ -1.19
PFD1YJL179W YAH1Q12184 172 aaKnown RBP7.63□□□□□ -1.19
PFD1YJL179W YOL036WQ08206 761 aa7.61□□□□□ -1.19
PFD1YJL179W BCK2P33306 851 aa7.6□□□□□ -1.19
PFD1YJL179W SET4P42948 560 aa7.6□□□□□ -1.19
PFD1YJL179W TFG1P41895 735 aaPredicted RBP7.58□□□□□ -1.2
PFD1YJL179W CHL1P22516 861 aaPredicted RBP7.51□□□□□ -1.21
PFD1YJL179W PSD2P53037 1138 aaKnown RBP7.51□□□□□ -1.21
PFD1YJL179W MRM1P25270 412 aa7.5□□□□□ -1.21
PFD1YJL179W SAP30P38429 201 aa7.49□□□□□ -1.21
PFD1YJL179W YLR271WQ06152 274 aa7.47□□□□□ -1.21
PFD1YJL179W YMR1P47147 688 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22not detected
PFD1YJL179W PRE3P38624 215 aa7.44□□□□□ -1.22
PFD1YJL179W JIP4Q03361 876 aa7.44□□□□□ -1.22
PFD1YJL179W YDL129WQ07555 291 aa7.44□□□□□ -1.22
PFD1YJL179W SAM3Q08986 587 aa7.44□□□□□ -1.22
PFD1YJL179W VMA1P17255 1071 aaKnown RBP7.43□□□□□ -1.22
PFD1YJL179W DAN4P47179 1161 aa7.43□□□□□ -1.22
PFD1YJL179W DBP1P24784 617 aaKnown RBP7.42□□□□□ -1.22
PFD1YJL179W ABP1P15891 592 aaKnown RBP7.38□□□□□ -1.23
PFD1YJL179W XDJ1P39102 459 aa7.37□□□□□ -1.23
PFD1YJL179W VPS29P38759 282 aa7.35□□□□□ -1.23
PFD1YJL179W YFR006WP43590 535 aa7.34□□□□□ -1.23
PFD1YJL179W RGA2Q06407 1009 aa7.34□□□□□ -1.23
PFD1YJL179W VRP1P37370 817 aa7.3□□□□□ -1.24
PFD1YJL179W PTC4P38089 393 aa7.3□□□□□ -1.24
PFD1YJL179W RTG3P38165 486 aa7.3□□□□□ -1.24
PFD1YJL179W STS1P38637 319 aa7.3□□□□□ -1.24
PFD1YJL179W HTA1P04911 132 aaKnown RBP7.28□□□□□ -1.24
PFD1YJL179W HTA2P04912 132 aa7.28□□□□□ -1.24
PFD1YJL179W GYP5Q12344 894 aa7.28□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms