RNA–Protein interactions for RNA: YGR075C

PRP38, Transcript of Unique component of the U4/U6.U5 tri-snRNP particle, yeastyeast

Gene PRP38, Length 729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP38YGR075C TY1A-JR2P47099 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-DR1Q03856 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-ML1Q04706 440 aaKnown RBP8.05□□□□□ -1.12
PRP38YGR075C TY1A-BRQ12217 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-NL2Q12470 440 aa8.05□□□□□ -1.12
PRP38YGR075C TY1A-GR2Q12485 440 aa8.05□□□□□ -1.12
PRP38YGR075C PRT1P06103 763 aaKnown RBP8.04□□□□□ -1.12
PRP38YGR075C NPL4P33755 580 aa8.04□□□□□ -1.12
PRP38YGR075C CLB5P30283 435 aa8.03□□□□□ -1.12
PRP38YGR075C SEC2P17065 759 aa8.02□□□□□ -1.13
PRP38YGR075C GCD11P32481 527 aaKnown RBP7.99□□□□□ -1.13
PRP38YGR075C RAS1P01119 309 aa7.98□□□□□ -1.13
PRP38YGR075C KEX2P13134 814 aa7.98□□□□□ -1.13
PRP38YGR075C ERF2Q06551 359 aa7.98□□□□□ -1.13
PRP38YGR075C TEA1P47988 759 aa7.97□□□□□ -1.13
PRP38YGR075C AMS1P22855 1083 aa7.96□□□□□ -1.14
PRP38YGR075C MRF1P30775 413 aaPredicted RBP7.94□□□□□ -1.14
PRP38YGR075C SRC1Q03707 834 aa7.94□□□□□ -1.14
PRP38YGR075C YNR021WP53723 404 aaKnown RBP7.93□□□□□ -1.14
PRP38YGR075C NIS1P53939 407 aa7.93□□□□□ -1.14
PRP38YGR075C RRN7P40992 514 aa7.92□□□□□ -1.14
PRP38YGR075C YEL077CQ3E7X8 1277 aa7.92□□□□□ -1.14
PRP38YGR075C SIT4P20604 311 aa7.91□□□□□ -1.14
PRP38YGR075C GLC3P32775 704 aa7.91□□□□□ -1.14
PRP38YGR075C RTF1P53064 558 aa7.91□□□□□ -1.14
PRP38YGR075C SPT16P32558 1035 aaKnown RBP7.89□□□□□ -1.15
PRP38YGR075C AGE1Q04412 482 aa7.89□□□□□ -1.15
PRP38YGR075C ERG12P07277 443 aa7.88□□□□□ -1.15
PRP38YGR075C CST6P40535 587 aa7.87□□□□□ -1.15
PRP38YGR075C YNL115CP53925 644 aa7.87□□□□□ -1.15
PRP38YGR075C PAC1P39946 494 aaKnown RBP7.86□□□□□ -1.15
PRP38YGR075C ATF2P53296 535 aa7.86□□□□□ -1.15
PRP38YGR075C FPK1P53739 893 aa7.86□□□□□ -1.15
PRP38YGR075C TUB4P53378 473 aa7.85□□□□□ -1.15
PRP38YGR075C LEU3P08638 886 aa7.84□□□□□ -1.15
PRP38YGR075C PAT1P25644 796 aaKnown RBP7.84□□□□□ -1.15
PRP38YGR075C YMR196WQ04336 1088 aa7.83□□□□□ -1.16
PRP38YGR075C LAM6Q08001 693 aa7.83□□□□□ -1.16
PRP38YGR075C AIM7Q12156 149 aa7.82□□□□□ -1.16
PRP38YGR075C BDP1P46678 594 aa7.8□□□□□ -1.16
PRP38YGR075C HST2P53686 357 aa7.8□□□□□ -1.16
PRP38YGR075C SLY41P22215 453 aa7.79□□□□□ -1.16
PRP38YGR075C FRK1Q03002 865 aaPredicted RBP7.79□□□□□ -1.16
PRP38YGR075C MOD5P07884 428 aa7.78□□□□□ -1.16
PRP38YGR075C SCJ1P25303 377 aa7.77□□□□□ -1.17
PRP38YGR075C CLA4P48562 842 aa7.77□□□□□ -1.17
PRP38YGR075C TRK1P12685 1235 aa7.76□□□□□ -1.17
PRP38YGR075C AIR1P40507 360 aaKnown RBP7.74□□□□□ -1.17
PRP38YGR075C MMP1Q12372 583 aa7.74□□□□□ -1.17
PRP38YGR075C GLN1P32288 370 aaKnown RBP7.73□□□□□ -1.17
PRP38YGR075C ESS1P22696 170 aa7.72□□□□□ -1.17
PRP38YGR075C KTR1P27810 393 aaKnown RBP7.72□□□□□ -1.17
PRP38YGR075C TYW1Q08960 810 aaKnown RBP7.72□□□□□ -1.17
PRP38YGR075C TRM1P15565 570 aaKnown RBP7.71□□□□□ -1.18
PRP38YGR075C PDC1P06169 563 aaKnown RBP7.7□□□□□ -1.18
PRP38YGR075C KXD1P53158 218 aa7.69□□□□□ -1.18
PRP38YGR075C PUS6P53294 404 aa7.69□□□□□ -1.18
PRP38YGR075C TBF1Q02457 562 aa7.69□□□□□ -1.18
PRP38YGR075C YDL206WQ12424 762 aa7.69□□□□□ -1.18
PRP38YGR075C KIN1P13185 1064 aa7.68□□□□□ -1.18
PRP38YGR075C YJU3P28321 313 aa7.68□□□□□ -1.18
PRP38YGR075C TPD3P31383 635 aa7.68□□□□□ -1.18
PRP38YGR075C RRD1P40454 393 aaKnown RBP7.68□□□□□ -1.18
PRP38YGR075C PUS5Q06244 254 aa7.68□□□□□ -1.18
PRP38YGR075C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.67□□□□□ -1.18not detected
PRP38YGR075C HXT10P43581 546 aa7.67□□□□□ -1.18
PRP38YGR075C HED1Q03937 162 aa7.67□□□□□ -1.18
PRP38YGR075C CDC4P07834 779 aa7.66□□□□□ -1.18
PRP38YGR075C RPN1P38764 993 aaKnown RBP7.66□□□□□ -1.18
PRP38YGR075C CSN12P47130 423 aa7.66□□□□□ -1.18
PRP38YGR075C RPA14P50106 137 aa7.66□□□□□ -1.18
PRP38YGR075C PKH3Q03306 898 aaPredicted RBP7.64□□□□□ -1.19
PRP38YGR075C YPR097WQ06839 1073 aa7.64□□□□□ -1.19
PRP38YGR075C ALR1Q08269 859 aa7.64□□□□□ -1.19
PRP38YGR075C RSC30P38781 883 aa7.62□□□□□ -1.19
PRP38YGR075C MET32Q12041 191 aa7.61□□□□□ -1.19
PRP38YGR075C BRE2P43132 505 aa7.59□□□□□ -1.19
PRP38YGR075C ARG8P18544 423 aa7.57□□□□□ -1.2
PRP38YGR075C RAD59Q12223 238 aa7.57□□□□□ -1.2
PRP38YGR075C SYH1Q02875 849 aaKnown RBP7.56□□□□□ -1.2
PRP38YGR075C SSA2P10592 639 aaKnown RBP7.55□□□□□ -1.2
PRP38YGR075C GUA1P38625 525 aaKnown RBP7.54□□□□□ -1.2
PRP38YGR075C ASH1P34233 588 aa7.53□□□□□ -1.2
PRP38YGR075C AFT1P22149 690 aa7.52□□□□□ -1.21
PRP38YGR075C KIP2P28743 706 aa7.51□□□□□ -1.21
PRP38YGR075C VAC17P25591 423 aa7.5□□□□□ -1.21
PRP38YGR075C IXR1P33417 597 aa7.5□□□□□ -1.21
PRP38YGR075C GCR2Q01722 534 aa7.5□□□□□ -1.21
PRP38YGR075C HST3P53687 447 aa7.49□□□□□ -1.21
PRP38YGR075C MRT4P33201 236 aaKnown RBP7.46□□□□□ -1.22
PRP38YGR075C MAK16P10962 306 aaPredicted RBP7.45□□□□□ -1.22
PRP38YGR075C FIG4P42837 879 aa7.45□□□□□ -1.22
PRP38YGR075C MSB3P48566 633 aaPredicted RBP7.45□□□□□ -1.22
PRP38YGR075C HPC2Q01448 625 aa7.45□□□□□ -1.22
PRP38YGR075C ITT1Q04638 464 aa7.44□□□□□ -1.22
PRP38YGR075C YJR115WP47152 169 aa7.43□□□□□ -1.22
PRP38YGR075C YPR084WQ06821 456 aa7.41□□□□□ -1.22
PRP38YGR075C TEC1P18412 486 aa7.4□□□□□ -1.22
PRP38YGR075C UGA3P26370 528 aa7.4□□□□□ -1.22
PRP38YGR075C MET22P32179 357 aa7.4□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms