RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W TY1A-PR2P0CX60 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-DR5P0CX65 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-ER2P0CX66 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-GR3P0CX67 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-LR1P0CX68 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-MR2P0CX69 440 aa4.79□□□□□ -1.64
CUL3YGR003W SEC2P17065 759 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-JR2P47099 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-DR1Q03856 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-ML1Q04706 440 aaKnown RBP4.79□□□□□ -1.64
CUL3YGR003W TY1A-BRQ12217 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-NL2Q12470 440 aa4.79□□□□□ -1.64
CUL3YGR003W TY1A-GR2Q12485 440 aa4.79□□□□□ -1.64
CUL3YGR003W YDR090CQ03193 310 aa4.78□□□□□ -1.64
CUL3YGR003W PAT1P25644 796 aaKnown RBP4.78□□□□□ -1.64
CUL3YGR003W LCB5Q06147 687 aaKnown RBP4.78□□□□□ -1.64
CUL3YGR003W RRN7P40992 514 aa4.77□□□□□ -1.65
CUL3YGR003W YDL176WQ12027 708 aa4.77□□□□□ -1.65
CUL3YGR003W IFH1P39520 1085 aa4.76□□□□□ -1.65
CUL3YGR003W ASH1P34233 588 aa4.74□□□□□ -1.65
CUL3YGR003W MTC5Q03897 1148 aa4.74□□□□□ -1.65
CUL3YGR003W HST3P53687 447 aa4.72□□□□□ -1.65
CUL3YGR003W AFT1P22149 690 aa4.71□□□□□ -1.66
CUL3YGR003W MET32Q12041 191 aa4.7□□□□□ -1.66
CUL3YGR003W RRD1P40454 393 aaKnown RBP4.7□□□□□ -1.66
CUL3YGR003W ORC6P38826 435 aa4.69□□□□□ -1.66
CUL3YGR003W MVP1P40959 511 aaKnown RBP4.68□□□□□ -1.66
CUL3YGR003W YJR115WP47152 169 aa4.65□□□□□ -1.66
CUL3YGR003W YPR109WQ06104 294 aa4.65□□□□□ -1.67
CUL3YGR003W REF2P42073 533 aaPredicted RBP4.64□□□□□ -1.67
CUL3YGR003W MOD5P07884 428 aa4.63□□□□□ -1.67
CUL3YGR003W KEX2P13134 814 aa4.63□□□□□ -1.67
CUL3YGR003W CAF120P53836 1060 aa4.63□□□□□ -1.67
CUL3YGR003W PUS5Q06244 254 aa4.63□□□□□ -1.67
CUL3YGR003W RGR1P19263 1082 aa4.61□□□□□ -1.67
CUL3YGR003W PAC1P39946 494 aaKnown RBP4.61□□□□□ -1.67
CUL3YGR003W ERF2Q06551 359 aa4.61□□□□□ -1.67
CUL3YGR003W TRK2P28584 889 aa4.61□□□□□ -1.67
CUL3YGR003W ACO2P39533 789 aa4.6□□□□□ -1.67
CUL3YGR003W COX6P00427 148 aa4.57□□□□□ -1.68
CUL3YGR003W MSB3P48566 633 aaPredicted RBP4.57□□□□□ -1.68
CUL3YGR003W YGR035CP53222 116 aa4.57□□□□□ -1.68
CUL3YGR003W MAK21Q12176 1025 aaKnown RBP4.57□□□□□ -1.68
CUL3YGR003W YLR346CQ06139 101 aa4.56□□□□□ -1.68
CUL3YGR003W TUB4P53378 473 aa4.56□□□□□ -1.68
CUL3YGR003W OPT2Q06593 877 aa4.55□□□□□ -1.68
CUL3YGR003W AGE1Q04412 482 aa4.54□□□□□ -1.68
CUL3YGR003W UGA3P26370 528 aa4.53□□□□□ -1.68
CUL3YGR003W SRF1Q12516 437 aa4.53□□□□□ -1.68
CUL3YGR003W YPR148CQ06523 435 aa4.52□□□□□ -1.69
CUL3YGR003W PTK2P47116 818 aaKnown RBP4.52□□□□□ -1.69
CUL3YGR003W HPF1Q05164 967 aa4.52□□□□□ -1.69
CUL3YGR003W SYH1Q02875 849 aaKnown RBP4.51□□□□□ -1.69
CUL3YGR003W YIR007WP40566 764 aa4.5□□□□□ -1.69
CUL3YGR003W KXD1P53158 218 aa4.5□□□□□ -1.69
CUL3YGR003W GLY1P37303 387 aaKnown RBP4.49□□□□□ -1.69
CUL3YGR003W RTF1P53064 558 aa4.48□□□□□ -1.69
CUL3YGR003W SCW11P53189 542 aa4.48□□□□□ -1.69
CUL3YGR003W TPD3P31383 635 aa4.48□□□□□ -1.69
CUL3YGR003W ICP55P40051 511 aa4.48□□□□□ -1.69
CUL3YGR003W TYW1Q08960 810 aaKnown RBP4.48□□□□□ -1.69
CUL3YGR003W VPS70P47161 811 aa4.46□□□□□ -1.69
CUL3YGR003W YPR204WQ08995 1032 aa4.46□□□□□ -1.69
CUL3YGR003W PUS1Q12211 544 aaKnown RBP4.46□□□□□ -1.69
CUL3YGR003W HXT10P43581 546 aa4.46□□□□□ -1.7
CUL3YGR003W NUP85P46673 744 aa4.46□□□□□ -1.7
CUL3YGR003W YNL115CP53925 644 aa4.46□□□□□ -1.7
CUL3YGR003W MIP1P15801 1254 aa4.45□□□□□ -1.7
CUL3YGR003W CLB5P30283 435 aa4.45□□□□□ -1.7
CUL3YGR003W LSB3P43603 459 aaKnown RBP4.45□□□□□ -1.7
CUL3YGR003W TY1A-BLQ12266 440 aa4.45□□□□□ -1.7
CUL3YGR003W PSE1P32337 1089 aaKnown RBP4.44□□□□□ -1.7
CUL3YGR003W KIP2P28743 706 aa4.42□□□□□ -1.7
CUL3YGR003W PDC1P06169 563 aaKnown RBP4.41□□□□□ -1.7
CUL3YGR003W RTT106P40161 455 aa4.4□□□□□ -1.7
CUL3YGR003W UBP2Q01476 1272 aa4.39□□□□□ -1.71
CUL3YGR003W SIT4P20604 311 aa4.38□□□□□ -1.71
CUL3YGR003W MRT4P33201 236 aaKnown RBP4.38□□□□□ -1.71
CUL3YGR003W IXR1P33417 597 aa4.38□□□□□ -1.71
CUL3YGR003W PHM7Q12252 991 aa4.38□□□□□ -1.71
CUL3YGR003W DPH6Q12429 685 aa4.38□□□□□ -1.71
CUL3YGR003W LSC2P53312 427 aa4.38□□□□□ -1.71
CUL3YGR003W NRD1P53617 575 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
CUL3YGR003W ALR1Q08269 859 aa4.36□□□□□ -1.71
CUL3YGR003W ARG82P07250 355 aa4.35□□□□□ -1.71
CUL3YGR003W MDJ1P35191 511 aa4.34□□□□□ -1.72
CUL3YGR003W ROG3P43602 733 aa4.33□□□□□ -1.72
CUL3YGR003W RPA14P50106 137 aa4.33□□□□□ -1.72
CUL3YGR003W SLY41P22215 453 aa4.33□□□□□ -1.72
CUL3YGR003W AAD14P42884 376 aa4.33□□□□□ -1.72
CUL3YGR003W TEA1P47988 759 aa4.33□□□□□ -1.72
CUL3YGR003W NIS1P53939 407 aa4.32□□□□□ -1.72
CUL3YGR003W TY1A-MR1Q04215 440 aa4.32□□□□□ -1.72
CUL3YGR003W YPR097WQ06839 1073 aa4.32□□□□□ -1.72
CUL3YGR003W PBS2P08018 668 aa4.31□□□□□ -1.72
CUL3YGR003W LYS5P50113 272 aa4.31□□□□□ -1.72
CUL3YGR003W TBF1Q02457 562 aa4.31□□□□□ -1.72
CUL3YGR003W YDL206WQ12424 762 aa4.31□□□□□ -1.72
CUL3YGR003W YJR098CP47139 656 aa4.31□□□□□ -1.72
CUL3YGR003W TCB1Q12466 1186 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms